TomoSeq data search

Data search

Results for MligTC455_29552

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29552

820

17.08

Mlig455_060630

Neo: -

Age: -

Mlig455_060630 {REF} {Length: 1802} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=181, Expect=3e-57]} {RNA1509_3686, RNA1509_40414, RNA1509_48539, RNA1509_49978} {RNA1310_17084, RNA1509_40414, RNA1509_48539, RNA1509_49978} {RNA1509_40414, RNA1509_48539, RNA1509_49978, RNA815_6244.2}

Cumulative graph for MligTC455_29552

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.622	4.243	0.68775	1.00000
RegionR2	-0.893	4.243	0.27981	0.66652
RegionR3	-0.077	4.243	0.90909	1.00000
RegionR4	0.303	4.243	0.69724	0.98689
RegionR5	0.531	4.243	0.39157	0.74718
RegionR6	0.628	4.243	0.33029	0.91847
RegionR7	-0.697	4.243	0.40711	1.00000
RegionR8	0.827	4.243	0.33187	0.96577

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.602	4.243	0.35510	1.00000
RegenerationR2	0.232	4.243	0.76199	0.97724
RegenerationR3	0.308	4.243	0.70209	0.94820
RegenerationR4	0.563	4.243	0.48054	0.85867
RegenerationR5	0.563	4.243	0.46423	0.83912
RegenerationR6	0.536	4.243	0.50009	0.80633
RegenerationBL	0.706	4.243	0.33913	0.70580
RegenerationTP	1.024	4.243	0.20419	0.64602

Genes with expression patterns similar to MligTC455_29552

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29552	820	17.08	Mlig455_060630	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060630 {REF} {Length: 1802} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=181, Expect=3e-57]} {RNA1509_3686, RNA1509_40414, RNA1509_48539, RNA1509_49978} {RNA1310_17084, RNA1509_40414, RNA1509_48539, RNA1509_49978} {RNA1509_40414, RNA1509_48539, RNA1509_49978, RNA815_6244.2}
2.	MligTC455_29550	736	15.34	Mlig455_053953	Neo: - Age: -		4.698	0.920	0.849	0.986	-	0.988	0.955	Mlig455_053953 {REF} {Length: 1327} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=181, Expect=3e-57]} {RNA1509_3686} {RNA1310_17084} {RNA815_6244.2}
3.	MligTC455_51692	339	7.06	Mlig455_044237	Neo: Int S/G2/M Age: - Region-enriched R5: 3.772/0.00000 Region-enriched R4: 3.477/0.00042		0.958	-	-	-	0.958	-	-	Mlig455_044237 {REF} {Length: 1704} {Dmel: FBgn0034200, Gbp2, Growth-blocking peptide 2, [Score=51.2, Expect=5e-08]} {RNA1509_19501} {RNA1310_45035} {RNA815_2058}
4.	MligTC455_44655	2883	60.05	Mlig455_009577	Neo: - Age: logFC(26M/2M)=0.172	SNX1	0.956	-	-	-	-	0.956	-	Mlig455_009577 {REF} {Length: 3707} {TRANSSPLICED} {Pfam: Vps5 C terminal like [PF09325.12, score=202.9]; PX domain [PF00787.26, score=63.9]} {Human: ENSG00000028528, SNX1, sorting nexin 1, [RH, Score=362, Expect=4e-120]; ENSG00000205302, SNX2, sorting nexin 2, [RH, Score=362, Expect=5e-120]} {Mouse: ENSMUSG00000032382, Snx1, sorting nexin 1, [RH, Score=364, Expect=8e-121]; ENSMUSG00000034484, Snx2, sorting nexin 2, [RH, Score=361, Expect=1e-119]} {Dmel: FBgn0031534, Snx1, Sorting nexin 1, [RH, Score=371, Expect=1e-124]} {Celegans: WBGene00004927, snx-1, Sorting NeXin, [RH, Score=222, Expect=7e-67]} {Smed: dd_Smed_v6_835_0_2, dd_Smed_v6_835_0_2, [RH, Score=345, Expect=1e-114]} {RNA1509_10116, RNA1509_14848, RNA1509_19966, RNA1509_33462, RNA1509_41533, RNA1509_58706} {RNA1310_18302, RNA1509_10116, RNA1509_14848, RNA1509_19966, RNA1509_33462, RNA1509_41533, RNA1509_58706} {RNA1509_10116, RNA1509_14848, RNA1509_19966, RNA1509_33462, RNA1509_41533, RNA1509_58706, RNA815_9639}
5.	MligTC455_15436	151	3.14	Mlig455_001732, Mlig455_063318	Neo: - Age: - Region-enriched R3: 3.456/0.02731 Region-enriched R5: 3.045/0.01531		0.95	-	-	-	0.950	-	-	Mlig455_001732 {REF} {Length: 816} {NoTransDecoderORF} {RNA1509_59156} {RNA1310_62941} {RNA815_63180} Mlig455_063318 {REF} {Length: 936} {NoTransDecoderORF} {RNA1509_59156} {RNA1310_62941} {RNA815_63180}

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