Data search
Results for MligTC455_29556
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29556 | 66 | 1.38 | Mlig455_065720 | Neo: - Age: Up-Down-Down |
Mlig455_065720 {REF} {Length: 3590} {RNA1509_43258, RNA1509_44619} {RNA1310_5727.1, RNA1509_44619} {RNA1509_44619, RNA815_21849.1} |
Cumulative graph for MligTC455_29556
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.546 | 1.647 | 1.00000 | 1.00000 | |
| RegionR2 | 1.353 | 1.647 | 0.30537 | 0.69603 | |
| RegionR3 | 2.632 | 1.647 | 0.02432 | 0.26623 | |
| RegionR4 | 2.413 | 1.647 | 0.06488 | 0.22974 | |
| RegionR5 | 2.808 | 1.647 | 0.00890 | 0.05307 | |
| RegionR6 | 1.086 | 1.647 | 0.37987 | 0.95967 | |
| RegionR7 | -3.33 | 1.647 | 0.99969 | 1.00000 | |
| RegionR8 | -3.416 | 1.647 | 0.99972 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.262 | 1.647 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.162 | 1.647 | 0.83935 | 1.00000 | |
| RegenerationR3 | -0.664 | 1.647 | 0.43460 | 0.82380 | |
| RegenerationR4 | -0.741 | 1.647 | 0.44171 | 0.83823 | |
| RegenerationR5 | -0.153 | 1.647 | 0.83417 | 0.99882 | |
| RegenerationR6 | 0.845 | 1.647 | 0.40700 | 0.74213 | |
| RegenerationBL | 2.607 | 1.647 | 0.19754 | 0.53464 | |
| RegenerationTP | 4.384 | 1.647 | 0.07808 | 0.44636 |
Genes with expression patterns similar to MligTC455_29556
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29556 | 66 | 1.38 | Mlig455_065720 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065720 {REF} {Length: 3590} {RNA1509_43258, RNA1509_44619} {RNA1310_5727.1, RNA1509_44619} {RNA1509_44619, RNA815_21849.1} | |
| 2. | MligTC455_29555 | 57 | 1.19 | Mlig455_045524 | Neo: - Age: Up-Down-Down |
2.584 | 0.851 | - | 0.780 | - | - | 0.953 | Mlig455_045524 {REF} {Length: 3468} {RNA1509_43258} {RNA1310_5727.1, RNA1509_43258} {RNA1509_43258, RNA815_4906.1} | |
| 3. | MligTC455_51729 | 260 | 5.42 | Mlig455_034685 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R4: 1.736/0.04662 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_034685 {REF} {Length: 2040} {TRANSSPLICED} {RNA1509_20510, RNA1509_30120, RNA1509_44360} {RNA1310_36557, RNA1509_30120, RNA1509_44360} {RNA1509_30120, RNA1509_44360, RNA815_29917} | |
| 4. | MligTC455_40814 | 27 | 0.56 | Mlig455_069639 | Neo: - Age: - Regeneration-downregulated R2: -4.594 Regeneration-depleted R2: -4.594 |
0.952 | - | - | 0.952 | - | - | - | Mlig455_069639 {REF} {Length: 1762} {Pfam: Proline-rich membrane anchor 1 [PF16101.7, score=20.5]; Immunoglobulin domain [PF13927.8, score=19.1]; Immunoglobulin V-set domain [PF07686.19, score=18.7]} {RNA1310_67925} {RNA815_33630} | |
| 5. | MligTC455_04366 | 654 | 13.63 | Mlig455_052829 | Neo: - Age: - |
UPF2 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1} |
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