Data search
Results for MligTC455_29558
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29558 | 71 | 1.47 | Mlig455_069405 | Neo: - Age: - |
Mlig455_069405 {REF} {Length: 1105} {NoTransDecoderORF} {RNA1509_15725, RNA1509_27614} {RNA1310_36154, RNA1509_27614} {RNA1509_27614, RNA815_48933} |
Cumulative graph for MligTC455_29558
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.949 | 1.551 | 1.00000 | 1.00000 | |
| RegionR2 | -1.125 | 1.551 | 0.98010 | 1.00000 | |
| RegionR3 | 1.043 | 1.551 | 0.45873 | 0.96850 | |
| RegionR4 | 0.364 | 1.551 | 0.79165 | 1.00000 | |
| RegionR5 | 1.71 | 1.551 | 0.28332 | 0.61255 | |
| RegionR6 | 0.43 | 1.551 | 0.79771 | 1.00000 | |
| RegionR7 | 3.972 | 1.551 | 0.04856 | 0.42375 | |
| RegionR8 | -2.447 | 1.551 | 0.99957 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.997 | 1.551 | 0.99994 | 1.00000 | |
| RegenerationR2 | 1.565 | 1.551 | 0.53641 | 0.88674 | |
| RegenerationR3 | -1.434 | 1.551 | 0.40061 | 0.80293 | |
| RegenerationR4 | 0.129 | 1.551 | 0.91299 | 1.00000 | |
| RegenerationR5 | -2.704 | 1.551 | 0.17175 | 0.60008 | |
| RegenerationR6 | -0.514 | 1.551 | 0.79190 | 0.97354 | |
| RegenerationBL | -5.249 | 1.551 | 0.99948 | 1.00000 | |
| RegenerationTP | 0.228 | 1.551 | 0.85814 | 1.00000 |
Genes with expression patterns similar to MligTC455_29558
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29558 | 71 | 1.47 | Mlig455_069405 | Neo: - Age: - |
3 | - | - | 1.000 | 1.000 | 1.000 | - | Mlig455_069405 {REF} {Length: 1105} {NoTransDecoderORF} {RNA1509_15725, RNA1509_27614} {RNA1310_36154, RNA1509_27614} {RNA1509_27614, RNA815_48933} | |
| 2. | MligTC455_40156 | 18 | 0.38 | Mlig455_038693 | Neo: - |
0.973 | - | - | 0.973 | - | - | - | Mlig455_038693 {REF} {Length: 2831} {RNA1509_1762} {RNA1310_2511} {RNA815_910.1} | |
| 3. | MligTC455_35417 | 539 | 11.23 | Mlig455_025920, Mlig455_025952 | Neo: - Age: - Region-enriched R2: 3.849/0.00283 |
0.968 | - | - | - | 0.968 | - | - | Mlig455_025920 {REF} {Length: 3607} {RNA1509_50554, RNA1509_8462} {RNA1310_23985, RNA1509_50554} {RNA1509_50554, RNA815_9218.1} Mlig455_025952 {REF} {Length: 3531} {RNA1509_48873, RNA1509_8462} {RNA1310_23985, RNA1509_48873} {RNA1509_48873, RNA815_9218.1} |
|
| 4. | MligTC455_24952 | 637 | 13.28 | Mlig455_054178, Mlig455_060727 | Neo: - Age: Down-Up-Down Region-specific R2: 4.165 Region-enriched R2: 3.160/0.00003 Regeneration-downregulated BL: -4.774 Regeneration-depleted BL: -4.774 |
CCDC169 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_054178 {REF} {Length: 1390} {Pfam: Domain of unknown function (DUF4600) [PF15372.8, score=97.2]} {Human: ENSG00000242715, CCDC169, coiled-coil domain containing 169, [RH, Score=82.8, Expect=6e-19]} {Mouse: ENSMUSG00000048655, Ccdc169, coiled-coil domain containing 169, [RH, Score=94.0, Expect=3e-23]} {Smed: dd_Smed_v6_12011_0_1, dd_Smed_v6_12011_0_1, [RH, Score=207, Expect=9e-68]} {RNA1509_8270} {RNA1310_23029} {RNA815_11545} Mlig455_060727 {REF} {Length: 1391} {Pfam: Domain of unknown function (DUF4600) [PF15372.8, score=97.2]} {Human: ENSG00000242715, CCDC169, coiled-coil domain containing 169, [RH, Score=82.8, Expect=6e-19]} {Mouse: ENSMUSG00000048655, Ccdc169, coiled-coil domain containing 169, [RH, Score=94.0, Expect=3e-23]} {Smed: dd_Smed_v6_12011_0_1, dd_Smed_v6_12011_0_1, [RH, Score=207, Expect=9e-68]} {RNA1509_8270} {RNA1310_23029, RNA1509_8270} {RNA1509_8270, RNA815_11545} |
| 5. | MligTC455_13570 | 475 | 9.89 | Mlig455_052425 | Neo: - Age: - |
0.957 | - | - | - | 0.957 | - | - | Mlig455_052425 {REF} {Length: 1052} {RNA1310_135712} | |
| 6. | MligTC455_39156 | 915 | 19.05 | Mlig455_021449 | Neo: - Age: logFC(26M/2M)=-0.499 |
SPATA1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_021449 {REF} {Length: 2777} {Pfam: Spermatogenesis-associated C-terminus [PF15743.7, score=142.9]} {Human: ENSG00000122432, SPATA1, spermatogenesis associated 1, [RH, Score=117, Expect=9e-28]} {Mouse: ENSMUSG00000028188, Spata1, spermatogenesis associated 1, [RH, Score=117, Expect=4e-28]} {Smed: dd_Smed_v6_15381_0_1, dd_Smed_v6_15381_0_1, [RH, Score=176, Expect=3e-49]} {RNA1509_51842} {RNA1310_24913} {RNA815_4922.1} |