Data search
Results for MligTC455_29560
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29560 | 30125 | 627.59 | Mlig455_053255 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.812 |
RPS15 | Mlig455_053255 {REF} {Length: 625} {TRANSSPLICED} {Pfam: Ribosomal protein S19 [PF00203.23, score=115.8]} {Human: ENSG00000115268, RPS15, ribosomal protein S15, [RH, Score=206, Expect=4e-69]} {Mouse: ENSMUSG00000063457, Rps15, ribosomal protein S15, [RH, Score=206, Expect=3e-69]} {Dmel: FBgn0034138, RpS15, Ribosomal protein S15, [RH, Score=199, Expect=1e-66]} {Celegans: WBGene00004484, rps-15, 40S ribosomal protein S15, [RH, Score=205, Expect=5e-69]} {Smed: dd_Smed_v6_201_0_1, dd_Smed_v6_201_0_1, [RH, Score=213, Expect=3e-72]} {RNA1509_13176, RNA1509_20412, RNA1509_23719, RNA1509_556, RNA1509_57699, RNA1509_680, RNA1509_7832, RNA1509_786} {RNA1310_57081, RNA1509_13176, RNA1509_20412, RNA1509_23719, RNA1509_556, RNA1509_57699, RNA1509_680, RNA1509_7832, RNA1509_786} {RNA1509_13176, RNA1509_20412, RNA1509_23719, RNA1509_556, RNA1509_57699, RNA1509_680, RNA1509_7832, RNA1509_786, RNA815_29108.1} |
Cumulative graph for MligTC455_29560
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.58 | 9.365 | 0.11059 | 0.69178 | |
| RegionR2 | -0.464 | 9.365 | 0.14394 | 0.47244 | |
| RegionR3 | 0.336 | 9.365 | 0.21486 | 0.75596 | |
| RegionR4 | 0.295 | 9.365 | 0.31625 | 0.63219 | |
| RegionR5 | 0.346 | 9.365 | 0.18890 | 0.47160 | |
| RegionR6 | 0.216 | 9.365 | 0.42637 | 0.99179 | |
| RegionR7 | 0.096 | 9.365 | 0.71838 | 1.00000 | |
| RegionR8 | -0.244 | 9.365 | 0.40604 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.852 | 9.365 | 0.05305 | 0.70520 | |
| RegenerationR2 | -0.53 | 9.365 | 0.13640 | 0.56365 | |
| RegenerationR3 | -0.717 | 9.365 | 0.04650 | 0.37590 | |
| RegenerationR4 | -0.505 | 9.365 | 0.16606 | 0.60108 | |
| RegenerationR5 | -0.438 | 9.365 | 0.22072 | 0.65549 | |
| RegenerationR6 | -0.608 | 9.365 | 0.09035 | 0.37421 | |
| RegenerationBL | -0.417 | 9.365 | 0.17554 | 0.50232 | |
| RegenerationTP | -0.64 | 9.365 | 0.05438 | 0.38053 |
Genes with expression patterns similar to MligTC455_29560
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29560 | 30125 | 627.59 | Mlig455_053255 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.812 |
RPS15 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_053255 {REF} {Length: 625} {TRANSSPLICED} {Pfam: Ribosomal protein S19 [PF00203.23, score=115.8]} {Human: ENSG00000115268, RPS15, ribosomal protein S15, [RH, Score=206, Expect=4e-69]} {Mouse: ENSMUSG00000063457, Rps15, ribosomal protein S15, [RH, Score=206, Expect=3e-69]} {Dmel: FBgn0034138, RpS15, Ribosomal protein S15, [RH, Score=199, Expect=1e-66]} {Celegans: WBGene00004484, rps-15, 40S ribosomal protein S15, [RH, Score=205, Expect=5e-69]} {Smed: dd_Smed_v6_201_0_1, dd_Smed_v6_201_0_1, [RH, Score=213, Expect=3e-72]} {RNA1509_13176, RNA1509_20412, RNA1509_23719, RNA1509_556, RNA1509_57699, RNA1509_680, RNA1509_7832, RNA1509_786} {RNA1310_57081, RNA1509_13176, RNA1509_20412, RNA1509_23719, RNA1509_556, RNA1509_57699, RNA1509_680, RNA1509_7832, RNA1509_786} {RNA1509_13176, RNA1509_20412, RNA1509_23719, RNA1509_556, RNA1509_57699, RNA1509_680, RNA1509_7832, RNA1509_786, RNA815_29108.1} |
| 2. | MligTC455_29561 | 30860 | 642.92 | Mlig455_065038 | Neo: Int S/G2/M Age: Down-Up-Up |
RPS15 | 5.786 | 0.987 | 0.982 | 0.962 | 0.979 | 0.977 | 0.899 | Mlig455_065038 {REF} {Length: 625} {TRANSSPLICED} {Pfam: Ribosomal protein S19 [PF00203.23, score=115.8]} {Human: ENSG00000115268, RPS15, ribosomal protein S15, [RH, Score=206, Expect=5e-69]} {Mouse: ENSMUSG00000063457, Rps15, ribosomal protein S15, [RH, Score=206, Expect=4e-69]} {Dmel: FBgn0034138, RpS15, Ribosomal protein S15, [RH, Score=199, Expect=1e-66]} {Celegans: WBGene00004484, rps-15, 40S ribosomal protein S15, [RH, Score=204, Expect=7e-69]} {Smed: dd_Smed_v6_201_0_1, dd_Smed_v6_201_0_1, [RH, Score=212, Expect=4e-72]} {RNA1509_3641, RNA1509_57699} {RNA1310_57081, RNA1509_3641} {RNA1509_3641, RNA815_29108.1} |
| 3. | MligTC455_15733 | 28121 | 585.86 | Mlig455_067264 | Neo: - Age: logFC(26M/2M)=-0.415 |
1.74 | 0.789 | - | - | - | 0.951 | - | Mlig455_067264 {REF} {Length: 1482} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=119.0]} {Dmel: FBgn0034583, CG10527, [Score=73.9, Expect=5e-16]} {Smed: dd_Smed_v6_766_0_1, dd_Smed_v6_766_0_1, [RH, Score=136, Expect=1e-41]} {RNA1509_18673, RNA1509_9503} {RNA1310_39489, RNA1509_9503} {RNA1509_9503, RNA815_16771} | |
| 4. | MligTC455_43857 | 3330 | 69.38 | Mlig455_045192 | Neo: - Age: logFC(26M/2M)=-0.177 |
LAMP1 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_045192 {REF} {Length: 3284} {Pfam: Lysosome-associated membrane glycoprotein (Lamp) [PF01299.19, score=70.0]} {Human: ENSG00000185896, LAMP1, lysosomal associated membrane protein 1, [RH, Score=79.3, Expect=2e-15]} {Mouse: ENSMUSG00000031447, Lamp1, lysosomal-associated membrane protein 1, [RH, Score=84.0, Expect=5e-17]} {Dmel: FBgn0032949, Lamp1, [RH, Score=73.6, Expect=4e-14]} {Celegans: WBGene00015471, lmp-2, LAMP (Lysosome-associated membrane protein) homolog, [RH, Score=63.5, Expect=5e-11]} {Smed: dd_Smed_v6_2131_0_1, dd_Smed_v6_2131_0_1, [RH, Score=89.7, Expect=3e-19]} {RNA1509_19307, RNA1509_41596, RNA1509_46839, RNA1509_52291, RNA1509_842, RNA1509_8561} {RNA1310_13759.1, RNA1509_19307, RNA1509_41596, RNA1509_46839, RNA1509_52291, RNA1509_842, RNA1509_8561} {RNA1509_19307, RNA1509_41596, RNA1509_46839, RNA1509_52291, RNA1509_842, RNA1509_8561, RNA815_3563.1} |
Berezikov Lab - 2020-2021 © ERIBA