Data search
Results for MligTC455_29684
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29684 | 2636 | 54.92 | Mlig455_013544 | Neo: - Age: Up-Down-Up |
VKORC1L1 | Mlig455_013544 {REF} {Length: 1269} {TRANSSPLICED} {Pfam: Vitamin K epoxide reductase family [PF07884.16, score=73.5]} {Human: ENSG00000196715, VKORC1L1, vitamin K epoxide reductase complex subunit 1 like 1, [Score=103, Expect=7e-28]} {Mouse: ENSMUSG00000066735, Vkorc1l1, vitamin K epoxide reductase complex, subunit 1-like 1, [Score=105, Expect=1e-28]} {Dmel: FBgn0053544, Vkor, Vitamin-K epoxide reductase, [RH, Score=80.9, Expect=1e-19]} {Smed: dd_Smed_v6_12458_0_1, dd_Smed_v6_12458_0_1, [RH, Score=87.0, Expect=4e-22]} {RNA1509_2618} {RNA1310_21747} {RNA815_11837} |
Cumulative graph for MligTC455_29684
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.817 | 5.952 | 0.02616 | 0.42501 | |
| RegionR2 | 0.156 | 5.952 | 0.68589 | 1.00000 | |
| RegionR3 | 0.34 | 5.952 | 0.29995 | 0.84220 | |
| RegionR4 | 0.502 | 5.952 | 0.18673 | 0.46004 | |
| RegionR5 | 0.791 | 5.952 | 0.00984 | 0.05705 | |
| RegionR6 | -0.134 | 5.952 | 0.69747 | 1.00000 | |
| RegionR7 | 0.429 | 5.952 | 0.25465 | 0.88158 | |
| RegionR8 | -0.266 | 5.952 | 0.57714 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.46 | 5.952 | 0.67460 | 1.00000 | |
| RegenerationR2 | -0.37 | 5.952 | 0.33117 | 0.76807 | |
| RegenerationR3 | -0.092 | 5.952 | 0.81100 | 0.98537 | |
| RegenerationR4 | 0.203 | 5.952 | 0.61521 | 0.91874 | |
| RegenerationR5 | 0.049 | 5.952 | 0.89800 | 1.00000 | |
| RegenerationR6 | 0.789 | 5.952 | 0.04818 | 0.27460 | |
| RegenerationBL | 0.731 | 5.952 | 0.04725 | 0.24879 | |
| RegenerationTP | 0.595 | 5.952 | 0.14695 | 0.57055 |
Genes with expression patterns similar to MligTC455_29684
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29684 | 2636 | 54.92 | Mlig455_013544 | Neo: - Age: Up-Down-Up |
VKORC1L1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013544 {REF} {Length: 1269} {TRANSSPLICED} {Pfam: Vitamin K epoxide reductase family [PF07884.16, score=73.5]} {Human: ENSG00000196715, VKORC1L1, vitamin K epoxide reductase complex subunit 1 like 1, [Score=103, Expect=7e-28]} {Mouse: ENSMUSG00000066735, Vkorc1l1, vitamin K epoxide reductase complex, subunit 1-like 1, [Score=105, Expect=1e-28]} {Dmel: FBgn0053544, Vkor, Vitamin-K epoxide reductase, [RH, Score=80.9, Expect=1e-19]} {Smed: dd_Smed_v6_12458_0_1, dd_Smed_v6_12458_0_1, [RH, Score=87.0, Expect=4e-22]} {RNA1509_2618} {RNA1310_21747} {RNA815_11837} |
| 2. | MligTC455_29685 | 3633 | 75.69 | Mlig455_013599 | Neo: Int S/G2/M Age: Up-Up-Down |
VKORC1L1 | 4.681 | 0.900 | 0.941 | 0.913 | 0.974 | 0.953 | - | Mlig455_013599 {REF} {Length: 1277} {TRANSSPLICED} {Pfam: Vitamin K epoxide reductase family [PF07884.16, score=72.9]} {Human: ENSG00000196715, VKORC1L1, vitamin K epoxide reductase complex subunit 1 like 1, [Score=102, Expect=1e-27]} {Mouse: ENSMUSG00000066735, Vkorc1l1, vitamin K epoxide reductase complex, subunit 1-like 1, [Score=104, Expect=2e-28]} {Dmel: FBgn0053544, Vkor, Vitamin-K epoxide reductase, [RH, Score=80.5, Expect=2e-19]} {Smed: dd_Smed_v6_12458_0_1, dd_Smed_v6_12458_0_1, [RH, Score=86.3, Expect=8e-22]} {RNA1509_2618} {RNA1310_21747, RNA1509_2618} {RNA1509_2618, RNA815_11837} |
| 3. | MligTC455_39659 | 6052 | 126.08 | Mlig455_068875 | Neo: - Age: - Region-enriched R4: 1.032/0.00006 |
PSMA4 | 2.517 | - | 0.727 | - | 0.805 | 0.985 | - | Mlig455_068875 {REF} {Length: 1251} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=189.8]; Proteasome subunit A N-terminal signature [PF10584.11, score=52.8]} {Human: ENSG00000041357, PSMA4, proteasome subunit alpha 4, [RH, Score=363, Expect=6e-128]} {Mouse: ENSMUSG00000032301, Psma4, proteasome (prosome, macropain) subunit, alpha type 4, [RH, Score=363, Expect=7e-128]} {Dmel: FBgn0261394, Prosalpha3, Proteasome alpha3 subunit, [RH, Score=305, Expect=4e-105]} {Celegans: WBGene00003924, pas-3, Proteasome subunit alpha type-4, [RH, Score=298, Expect=1e-102]} {Smed: dd_Smed_v6_1541_0_1, dd_Smed_v6_1541_0_1, [RH, Score=373, Expect=4e-132]} {RNA1509_7476} {RNA1310_28223.1} {RNA815_9797} |
| 4. | MligTC455_39657 | 4482 | 93.38 | Mlig455_068861 | Neo: - Age: Down-Up-Up Region-enriched R4: 1.346/0.00000 |
PSMA4 | 1.756 | - | - | - | 0.770 | 0.986 | - | Mlig455_068861 {REF} {Length: 1248} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=189.8]; Proteasome subunit A N-terminal signature [PF10584.11, score=52.8]} {Human: ENSG00000041357, PSMA4, proteasome subunit alpha 4, [RH, Score=363, Expect=6e-128]} {Mouse: ENSMUSG00000032301, Psma4, proteasome (prosome, macropain) subunit, alpha type 4, [RH, Score=363, Expect=7e-128]} {Dmel: FBgn0261394, Prosalpha3, Proteasome alpha3 subunit, [RH, Score=305, Expect=4e-105]} {Celegans: WBGene00003924, pas-3, Proteasome subunit alpha type-4, [RH, Score=298, Expect=1e-102]} {Smed: dd_Smed_v6_1541_0_1, dd_Smed_v6_1541_0_1, [RH, Score=373, Expect=4e-132]} {RNA1509_32494, RNA1509_48928, RNA1509_58437, RNA1509_7476} {RNA1310_28223.1, RNA1509_32494, RNA1509_48928, RNA1509_58437, RNA1509_7476} {RNA1509_32494, RNA1509_48928, RNA1509_58437, RNA1509_7476, RNA815_9797} |
| 5. | MligTC455_36833 | 3066 | 63.87 | Mlig455_051663 | Neo: - Age: - |
RNASEK | 0.982 | - | - | - | - | 0.982 | - | Mlig455_051663 {REF} {Length: 1148} {TRANSSPLICED} {Human: ENSG00000219200, RNASEK, ribonuclease K, [RH, Score=79.7, Expect=5e-20]} {Mouse: ENSMUSG00000040904, Gm21988, predicted gene 21988, [RH, Score=79.0, Expect=2e-20]; ENSMUSG00000093989, Rnasek, ribonuclease, RNase K, [RH, Score=79.0, Expect=2e-20]} {Dmel: FBgn0262116, RNASEK, Ribonuclease kappa, [RH, Score=72.4, Expect=6e-18]} {Celegans: WBGene00009881, F49C12.12, [Score=64.7, Expect=4e-15]} {Smed: dd_Smed_v6_1020_0_1, dd_Smed_v6_1020_0_1, [RH, Score=96.7, Expect=9e-28]} {RNA1509_14152, RNA1509_18600, RNA1509_21585} {RNA1310_30609, RNA1509_14152, RNA1509_18600, RNA1509_21585} {RNA1509_14152, RNA1509_18600, RNA1509_21585, RNA815_13737.1} |
| 6. | MligTC455_24688 | 7408 | 154.34 | Mlig455_016780 | Neo: Neoblast Age: logFC(26M/2M)=0.259 |
RPL36 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_016780 {REF} {Length: 445} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=137.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=122, Expect=4e-37]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=122, Expect=2e-37]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=104, Expect=2e-30]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=100, Expect=9e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=109, Expect=8e-33]} {RNA1509_10713, RNA1509_1282, RNA1509_17623, RNA1509_7903} {RNA1310_78482.1, RNA1509_10713, RNA1509_1282, RNA1509_17623, RNA1509_7903} {RNA1509_10713, RNA1509_1282, RNA1509_17623, RNA1509_7903, RNA815_39095} |
Berezikov Lab - 2020-2021 © ERIBA