Data search
Results for MligTC455_29726
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29726 | 4098 | 85.38 | Mlig455_025329 | Neo: - Age: - |
TMED7 | Mlig455_025329 {REF} {Length: 2107} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=143.3]} {Human: ENSG00000134970, TMED7, transmembrane p24 trafficking protein 7, [RH, Score=217, Expect=5e-71]} {Mouse: ENSMUSG00000033184, Tmed7, transmembrane p24 trafficking protein 7, [RH, Score=215, Expect=1e-70]} {Dmel: FBgn0030341, p24-1, p24-related-1, [RH, Score=205, Expect=5e-67]} {Celegans: WBGene00019003, F57B10.5, [RH, Score=193, Expect=2e-62]} {Smed: dd_Smed_v6_1465_1_1, dd_Smed_v6_1465_1_1, [RH, Score=152, Expect=3e-47]} {RNA1509_2492} {RNA1310_14432, RNA1509_2492} {RNA1509_2492, RNA815_6743.1} |
Cumulative graph for MligTC455_29726
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.568 | 6.504 | 0.23960 | 0.88602 | |
| RegionR2 | -0.439 | 6.504 | 0.13347 | 0.45364 | |
| RegionR3 | -0.227 | 6.504 | 0.35426 | 0.88961 | |
| RegionR4 | -0.227 | 6.504 | 0.40413 | 0.73090 | |
| RegionR5 | 0.672 | 6.504 | 0.00225 | 0.01910 | |
| RegionR6 | 0.288 | 6.504 | 0.23248 | 0.81660 | |
| RegionR7 | 0.528 | 6.504 | 0.04305 | 0.39942 | |
| RegionR8 | -0.027 | 6.504 | 0.93277 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.351 | 6.504 | 0.58629 | 1.00000 | |
| RegenerationR2 | -0.183 | 6.504 | 0.53201 | 0.88545 | |
| RegenerationR3 | -0.285 | 6.504 | 0.34707 | 0.76922 | |
| RegenerationR4 | -0.224 | 6.504 | 0.45886 | 0.84693 | |
| RegenerationR5 | -0.276 | 6.504 | 0.33028 | 0.75178 | |
| RegenerationR6 | -0.521 | 6.504 | 0.08336 | 0.36091 | |
| RegenerationBL | -0.272 | 6.504 | 0.35078 | 0.71835 | |
| RegenerationTP | 0.325 | 6.504 | 0.28271 | 0.73028 |
Genes with expression patterns similar to MligTC455_29726
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29726 | 4098 | 85.38 | Mlig455_025329 | Neo: - Age: - |
TMED7 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_025329 {REF} {Length: 2107} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=143.3]} {Human: ENSG00000134970, TMED7, transmembrane p24 trafficking protein 7, [RH, Score=217, Expect=5e-71]} {Mouse: ENSMUSG00000033184, Tmed7, transmembrane p24 trafficking protein 7, [RH, Score=215, Expect=1e-70]} {Dmel: FBgn0030341, p24-1, p24-related-1, [RH, Score=205, Expect=5e-67]} {Celegans: WBGene00019003, F57B10.5, [RH, Score=193, Expect=2e-62]} {Smed: dd_Smed_v6_1465_1_1, dd_Smed_v6_1465_1_1, [RH, Score=152, Expect=3e-47]} {RNA1509_2492} {RNA1310_14432, RNA1509_2492} {RNA1509_2492, RNA815_6743.1} |
| 2. | MligTC455_20339 | 248 | 5.16 | Mlig455_049193 | Neo: - Age: logFC(26M/2M)=0.976 Region-enriched R8: 3.824/0.00004 |
0.976 | - | - | - | 0.976 | - | - | Mlig455_049193 {REF} {Length: 1276} {TRANSSPLICED} {RNA1509_32364} {RNA1310_8246} {RNA815_10070.1} | |
| 3. | MligTC455_15755 | 62 | 1.3 | Mlig455_051284 | Neo: - Age: - Region-enriched R7: 4.959/0.00065 |
CHRNB3 | 0.961 | - | - | - | 0.961 | - | - | Mlig455_051284 {REF} {Length: 2666} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=130.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=32.4]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=142, Expect=1e-37]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=139, Expect=2e-36]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=137, Expect=1e-35]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=160, Expect=5e-44]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=146, Expect=9e-39]} {Celegans: WBGene00020048, lgc-12, Ligand-Gated ion Channel, [Score=140, Expect=2e-37]} {Smed: dd_Smed_v6_29533_0_1, dd_Smed_v6_29533_0_1, [RH, Score=205, Expect=1e-61]} {RNA1310_22037} {RNA815_37244} |
| 4. | MligTC455_19837 | 100 | 2.07 | Mlig455_050340 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_050340 {REF} {Length: 2400} {Pfam: Laminin G domain [PF02210.26, score=22.2]} {Mouse: ENSMUSG00000038048, Cntnap5c, contactin associated protein-like 5C, [Score=56.2, Expect=4e-08]; ENSMUSG00000070695, Cntnap5a, contactin associated protein-like 5A, [Score=54.7, Expect=1e-07]} {RNA1509_35128} {RNA1310_8604} {RNA815_4859} | |
| 5. | MligTC455_36983 | 90 | 1.88 | Mlig455_050315 | Neo: - Age: - Region-enriched R4: 3.233/0.04496 |
ASIC5 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_050315 {REF} {Length: 3622} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=173.0]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=60.8, Expect=8e-09]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=53.9, Expect=6e-07]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=49.3, Expect=1e-05]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=56.6, Expect=6e-08]} {RNA1310_4383.1} {RNA815_19486.1} |
| 6. | MligTC455_12651 | 877 | 18.27 | Mlig455_061117 | Neo: - |
0.959 | - | - | - | 0.959 | - | - | Mlig455_061117 {REF} {Length: 921} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=30.1]} {RNA1509_16147} {RNA1310_40437} {RNA815_22118} | |
| 7. | MligTC455_49121 | 209 | 4.35 | Mlig455_059551 | Neo: - Age: Down-Up-Down |
0.953 | - | - | - | 0.953 | - | - | Mlig455_059551 {REF} {Length: 1952} {RNA1509_39046} {RNA1310_36430, RNA1509_39046} {RNA1509_39046, RNA815_48373} | |
| 8. | MligTC455_20215 | 53 | 1.1 | Mlig455_034733 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_034733 {REF} {Length: 1330} {NoTransDecoderORF} {RNA1310_91476} {RNA815_62025} | |
| 9. | MligTC455_39606 | 760 | 15.83 | Mlig455_041071, Mlig455_041073, Mlig455_064712 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.586 Region-enriched R7: 2.475/0.00685 |
AL035078.4, CALU, RCN1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_041071 {REF} {Length: 756} {Human: ENSG00000285283, AL035078.4, novel protein, [Score=45.8, Expect=1e-05]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=46.6, Expect=5e-06]} {Celegans: WBGene00015646, mlt-10, [Score=66.2, Expect=7e-13]} {RNA1509_42339} {RNA1310_2126} {RNA815_1130} Mlig455_041073 {REF} {Length: 854} {Pfam: EF-hand domain pair [PF13499.8, score=20.9]; EF-hand domain [PF13405.8, score=18.8]; EF hand [PF00036.34, score=18.3]} {Human: ENSG00000049449, RCN1, reticulocalbin 1, [Score=56.2, Expect=1e-09]} {Mouse: ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=52.4, Expect=1e-08]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=57.0, Expect=3e-10]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=53.1, Expect=5e-09]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=49.7, Expect=5e-08]} {RNA1509_42339} {RNA1310_28039.1} {RNA815_39026} Mlig455_064712 {REF} {Length: 2449} {Pfam: EF hand [PF00036.34, score=58.7]; EF-hand domain pair [PF13499.8, score=58.2]; EF-hand domain [PF13405.8, score=50.6]; EF hand [PF13202.8, score=35.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=20.8]; EF-hand domain pair [PF13833.8, score=19.4]} {Human: ENSG00000128595, CALU, calumenin, [Score=85.9, Expect=1e-17]} {Mouse: ENSMUSG00000029767, Calu, calumenin, [Score=84.7, Expect=1e-17]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=84.7, Expect=1e-17]} {Celegans: WBGene00015646, mlt-10, [Score=177, Expect=1e-47]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=109, Expect=3e-26]} {RNA1509_42339} {RNA1310_28039.1} {RNA815_39026} |
Berezikov Lab - 2020-2021 © ERIBA