TomoSeq data search

Data search

Results for MligTC455_29842

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29842

669

13.94

Mlig455_008422, Mlig455_021954, Mlig455_024595, Mlig455_040409, Mlig455_050962

Neo: Irradiation

Age: Down-Down-Up, logFC(26M/2M)=-0.641

Mlig455_008422 {REF} {Length: 2099} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}

Mlig455_021954 {REF} {Length: 1805} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}

Mlig455_024595 {REF} {Length: 1998} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}

Mlig455_040409 {REF} {Length: 2000} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}

Mlig455_050962 {REF} {Length: 2018} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}

Cumulative graph for MligTC455_29842

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.645	4.231	0.68002	1.00000
RegionR2	-0.518	4.231	0.47712	0.86192
RegionR3	-1.305	4.231	0.03393	0.31821
RegionR4	1.553	4.231	0.01504	0.08265
RegionR5	-0.479	4.231	0.34277	0.69066
RegionR6	-1.535	4.231	0.01163	0.18466
RegionR7	1.406	4.231	0.02111	0.27088
RegionR8	1.522	4.231	0.03685	0.37652

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.06	4.231	0.97791	1.00000
RegenerationR2	0.617	4.231	0.29881	0.74075
RegenerationR3	0.446	4.231	0.52767	0.87067
RegenerationR4	-1.547	4.231	0.01625	0.19980
RegenerationR5	0.202	4.231	0.74779	0.97086
RegenerationR6	1.124	4.231	0.09581	0.38485
RegenerationBL	0.678	4.231	0.36073	0.72971
RegenerationTP	-1.312	4.231	0.07449	0.43676

Genes with expression patterns similar to MligTC455_29842

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29842	669	13.94	Mlig455_008422, Mlig455_021954, Mlig455_024595, Mlig455_040409, Mlig455_050962	Neo: Irradiation Age: Down-Down-Up, logFC(26M/2M)=-0.641		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008422 {REF} {Length: 2099} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1} Mlig455_021954 {REF} {Length: 1805} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1} Mlig455_024595 {REF} {Length: 1998} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1} Mlig455_040409 {REF} {Length: 2000} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1} Mlig455_050962 {REF} {Length: 2018} {Pfam: SAP domain [PF02037.29, score=41.1]; Phage integrase family [PF00589.24, score=27.1]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}
2.	MligTC455_29843	365	7.61	Mlig455_019913, Mlig455_021946, Mlig455_071083	Neo: - Age: -		5.843	0.997	0.999	0.995	0.909	0.954	0.989	Mlig455_019913 {REF} {Length: 943} {RNA1509_11319} {RNA1310_62995} {RNA815_9177.1} Mlig455_021946 {REF} {Length: 786} {Pfam: Phage integrase family [PF00589.24, score=27.8]} {RNA1509_11319} {RNA1310_45321} {RNA815_9177.1} Mlig455_071083 {REF} {Length: 961} {Pfam: Phage integrase family [PF00589.24, score=28.4]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}
3.	MligTC455_47935	681	14.18	Mlig455_010692, Mlig455_010792	Neo: Germline Age: Up-Down-Down Region-specific R4: 4.420 Region-enriched R4: 3.183/0.00000	AGBL1, AGTPBP1	0.97	-	-	0.970	-	-	-	Mlig455_010692 {REF} {Length: 4509} {TRANSSPLICED} {Pfam: Cytosolic carboxypeptidase N-terminal domain [PF18027.3, score=51.9]; Zinc carboxypeptidase [PF00246.26, score=48.0]} {Human: ENSG00000273540, AGBL1, ATP/GTP binding protein like 1, [RH, Score=462, Expect=2e-149]} {Mouse: ENSMUSG00000021557, Agtpbp1, ATP/GTP binding protein 1, [RH, Score=475, Expect=1e-153]; ENSMUSG00000025754, Agbl1, ATP/GTP binding protein-like 1, [RH, Score=468, Expect=1e-151]} {Dmel: FBgn0265726, Nna1, Nna1 carboxypeptidase, [Score=288, Expect=3e-87]} {Celegans: WBGene00018995, ccpp-1, Cytosolic carboxypeptidase 1, [RH, Score=333, Expect=3e-102]} {Smed: dd_Smed_v6_11728_0_1, dd_Smed_v6_11728_0_1, [RH, Score=468, Expect=2e-149]} {RNA1509_7574} {RNA1310_1793.1} {RNA815_13708} Mlig455_010792 {REF} {Length: 4427} {TRANSSPLICED} {Pfam: Cytosolic carboxypeptidase N-terminal domain [PF18027.3, score=50.5]; Zinc carboxypeptidase [PF00246.26, score=44.1]} {Human: ENSG00000135049, AGTPBP1, ATP/GTP binding protein 1, [RH, Score=500, Expect=3e-156]; ENSG00000273540, AGBL1, ATP/GTP binding protein like 1, [RH, Score=482, Expect=3e-150]} {Mouse: ENSMUSG00000021557, Agtpbp1, ATP/GTP binding protein 1, [RH, Score=497, Expect=2e-155]; ENSMUSG00000025754, Agbl1, ATP/GTP binding protein-like 1, [RH, Score=484, Expect=2e-151]} {Dmel: FBgn0265726, Nna1, Nna1 carboxypeptidase, [Score=287, Expect=8e-83]} {Celegans: WBGene00018995, ccpp-1, Cytosolic carboxypeptidase 1, [RH, Score=340, Expect=2e-99]} {Smed: dd_Smed_v6_11728_0_1, dd_Smed_v6_11728_0_1, [RH, Score=477, Expect=6e-146]} {RNA1509_22080, RNA1509_34305, RNA1509_7574} {RNA1310_1793.1, RNA1509_22080, RNA1509_34305, RNA1509_7574} {RNA1509_22080, RNA1509_34305, RNA1509_7574, RNA815_13708}
4.	MligTC455_26950	135	2.82	Mlig455_018367	Neo: - Age: Down-Up-Up		0.96	-	-	-	0.960	-	-	Mlig455_018367 {REF} {Length: 3545} {Pfam: WSC domain [PF01822.21, score=46.1]} {RNA1509_36146} {RNA1310_33999} {RNA815_22133.1}

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