Data search
Results for MligTC455_29875
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29875 | 217 | 4.52 | Mlig455_005627 | Neo: Germline |
HELZ2 | Mlig455_005627 {REF} {Length: 8303} {Pfam: RNB domain [PF00773.21, score=181.3]; AAA domain [PF13086.8, score=127.3]; AAA domain [PF13087.8, score=123.0]; AAA domain [PF13604.8, score=21.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=19.6]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=149, Expect=7e-35]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=145, Expect=5e-34]} {Dmel: FBgn0035111, Dis3l2, Dis3 like 3'-5' exoribonuclease 2, [Score=123, Expect=2e-27]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=105, Expect=2e-22]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=320, Expect=8e-88]} {RNA1509_13191} {RNA1310_275, RNA1509_13191} {RNA1509_13191, RNA815_118.1} |
Cumulative graph for MligTC455_29875
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.341 | 3.023 | 0.04909 | 0.52668 | |
| RegionR2 | 1.556 | 3.023 | 0.16048 | 0.50116 | |
| RegionR3 | 1.047 | 3.023 | 0.27720 | 0.82063 | |
| RegionR4 | 1.293 | 3.023 | 0.17150 | 0.43568 | |
| RegionR5 | 0.579 | 3.023 | 0.54620 | 0.90813 | |
| RegionR6 | 0.536 | 3.023 | 0.59806 | 1.00000 | |
| RegionR7 | 1.217 | 3.023 | 0.29027 | 0.92410 | |
| RegionR8 | 1.113 | 3.023 | 0.42647 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.77 | 3.023 | 0.99966 | 1.00000 | |
| RegenerationR2 | 0.765 | 3.023 | 0.25457 | 0.70129 | |
| RegenerationR3 | 0.952 | 3.023 | 0.19839 | 0.63298 | |
| RegenerationR4 | 0.673 | 3.023 | 0.34355 | 0.77479 | |
| RegenerationR5 | -0.061 | 3.023 | 0.92195 | 1.00000 | |
| RegenerationR6 | 0.202 | 3.023 | 0.81162 | 0.98366 | |
| RegenerationBL | -1.074 | 3.023 | 0.35388 | 0.72182 | |
| RegenerationTP | -0.302 | 3.023 | 0.77632 | 1.00000 |
Genes with expression patterns similar to MligTC455_29875
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29875 | 217 | 4.52 | Mlig455_005627 | Neo: Germline |
HELZ2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005627 {REF} {Length: 8303} {Pfam: RNB domain [PF00773.21, score=181.3]; AAA domain [PF13086.8, score=127.3]; AAA domain [PF13087.8, score=123.0]; AAA domain [PF13604.8, score=21.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=19.6]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=149, Expect=7e-35]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=145, Expect=5e-34]} {Dmel: FBgn0035111, Dis3l2, Dis3 like 3'-5' exoribonuclease 2, [Score=123, Expect=2e-27]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=105, Expect=2e-22]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=320, Expect=8e-88]} {RNA1509_13191} {RNA1310_275, RNA1509_13191} {RNA1509_13191, RNA815_118.1} |
| 2. | MligTC455_20590 | 333 | 6.95 | Mlig455_011663, Mlig455_049924 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.447 Region-specific R4: 6.602 Region-enriched R4: 3.679/0.00006 |
2.631 | - | 0.887 | - | - | 0.955 | 0.789 | Mlig455_011663 {REF} {Length: 3326} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.7]} {RNA1509_16168} {RNA1310_7446.1} {RNA815_20506} Mlig455_049924 {REF} {Length: 3338} {RNA1509_16168, RNA1509_28346} {RNA1310_7446.1, RNA1509_16168, RNA1509_28346} {RNA1509_16168, RNA1509_28346, RNA815_20506} |
|
| 3. | MligTC455_25337 | 279 | 5.82 | Mlig455_021734 | Neo: Germline Age: - Region-enriched R4: 3.623/0.00937 |
2.489 | - | 0.791 | - | 0.745 | 0.953 | - | Mlig455_021734 {REF} {Length: 2197} {Pfam: Rdx family [PF10262.11, score=25.9]} {RNA1509_33328, RNA1509_34368} {RNA1310_45699.1, RNA1509_33328, RNA1509_34368} {RNA1509_33328, RNA1509_34368, RNA815_26659} | |
| 4. | MligTC455_23662 | 285 | 5.95 | Mlig455_025104 | Neo: Irradiation Age: - Region-specific R4: 5.419 Region-enriched R4: 3.777/0.00001 |
2.357 | - | 0.704 | - | 0.952 | - | 0.701 | Mlig455_025104 {REF} {Length: 4467} {RNA1509_23438} {RNA1310_48896, RNA1509_23438} | |
| 5. | MligTC455_34963 | 262 | 5.46 | Mlig455_053055 | Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.385 Region-specific R4: 5.195 Region-enriched R4: 3.297/0.00000 |
1.844 | - | 0.888 | - | - | 0.956 | - | Mlig455_053055 {REF} {Length: 3067} {TRANSSPLICED} {RNA1509_12370, RNA1509_16044, RNA1509_35961, RNA1509_57992} {RNA1310_5163, RNA1509_12370, RNA1509_16044, RNA1509_35961, RNA1509_57992} {RNA1509_12370, RNA1509_16044, RNA1509_35961, RNA1509_57992, RNA815_1609.1} | |
| 6. | MligTC455_08848 | 220 | 4.58 | Mlig455_014383 | Neo: Irradiation Age: Up-Down-Up Region-enriched R4: 2.812/0.00936 |
1.66 | - | - | - | - | 0.955 | 0.705 | Mlig455_014383 {REF} {Length: 4093} {Pfam: SacI homology domain [PF02383.20, score=69.1]} {RNA1509_57354} {RNA1310_29279.1, RNA1509_57354} {RNA1509_57354, RNA815_6877.1} | |
| 7. | MligTC455_42995 | 1872 | 38.99 | Mlig455_039690, Mlig455_039747 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=2.163 Region-enriched R4: 2.769/0.00188 Regeneration-downregulated BL: -3.830 Regeneration-depleted BL: -3.830 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_039690 {REF} {Length: 1794} {RNA1509_2963} {RNA1310_19864.1} {RNA815_23906} Mlig455_039747 {REF} {Length: 1818} {RNA1509_16903, RNA1509_2963, RNA1509_42791} {RNA1310_19864.1, RNA1509_16903, RNA1509_2963, RNA1509_42791} {RNA1509_16903, RNA1509_2963, RNA1509_42791, RNA815_20006} |
|
| 8. | MligTC455_14053 | 17 | 0.35 | Mlig455_013617 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_013617 {REF} {Length: 655} {NoTransDecoderORF} | |
| 9. | MligTC455_21840 | 345 | 7.19 | Mlig455_004913 | Neo: Germline Age: Up-Down-Down Region-enriched R4: 2.907/0.03413 |
KCNK5 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_004913 {REF} {Length: 1569} {Pfam: Ion channel [PF07885.18, score=78.0]} {Human: ENSG00000164626, KCNK5, potassium two pore domain channel subfamily K member 5, [Score=62.4, Expect=3e-10]; ENSG00000095981, KCNK16, potassium two pore domain channel subfamily K member 16, [Score=59.3, Expect=2e-09]} {Mouse: ENSMUSG00000023387, Kcnk16, potassium channel, subfamily K, member 16, [Score=63.5, Expect=4e-11]; ENSMUSG00000023243, Kcnk5, potassium channel, subfamily K, member 5, [Score=60.8, Expect=5e-10]} {Dmel: FBgn0038621, CG10864, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00006657, twk-2, TWiK family of potassium channels, [Score=66.2, Expect=8e-12]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=65.5, Expect=7e-12]} {RNA1509_47162} {RNA1310_26078} {RNA815_11350} |
| 10. | MligTC455_30746 | 563 | 11.74 | Mlig455_058841 | Neo: Germline |
PIWIL1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_058841 {REF} {Length: 3743} {TRANSSPLICED} {Pfam: Piwi domain [PF02171.19, score=258.1]; PAZ domain [PF02170.24, score=98.8]; Argonaute linker 1 domain [PF08699.12, score=34.0]} {Human: ENSG00000125207, PIWIL1, piwi like RNA-mediated gene silencing 1, [RH, Score=563, Expect=0.0]; ENSG00000275051, PIWIL1, piwi like RNA-mediated gene silencing 1, [RH, Score=563, Expect=0.0]} {Mouse: ENSMUSG00000029423, Piwil1, piwi-like RNA-mediated gene silencing 1, [RH, Score=552, Expect=0.0]} {Dmel: FBgn0250816, AGO3, Argonaute 3, [RH, Score=517, Expect=2e-170]} {Celegans: WBGene00004178, prg-1, Piwi-like protein, [RH, Score=412, Expect=6e-131]} {Smed: dd_Smed_v6_1258_0_1, dd_Smed_v6_1258_0_1, [Score=495, Expect=7e-161]} {RNA1509_26940, RNA1509_26947} {RNA1310_6485, RNA1509_26940} {RNA1509_26940, RNA815_813.1} |
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