TomoSeq data search

Data search

Results for MligTC455_29879

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29879	558	11.63	Mlig455_019059, Mlig455_064343	Neo: - Age: logFC(26M/2M)=-0.301	NR2C2	Mlig455_019059 {REF} {Length: 4531} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=45.9]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [Score=80.9, Expect=3e-16]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [Score=80.9, Expect=3e-16]} {RNA1509_26020} {RNA1310_11731.1} {RNA815_25095} Mlig455_064343 {REF} {Length: 4642} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=101.6]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=44.5]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [RH, Score=142, Expect=1e-35]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [RH, Score=142, Expect=1e-35]} {Dmel: FBgn0003720, tll, tailless, [Score=133, Expect=2e-33]} {Celegans: WBGene00022423, nhr-41, Nuclear hormone receptor family member nhr-41, [Score=180, Expect=5e-50]} {Smed: dd_Smed_v6_9123_0_1, dd_Smed_v6_9123_0_1, [Score=177, Expect=4e-49]} {RNA1509_23554, RNA1509_26020, RNA1509_45590, RNA1509_54066} {RNA1310_11731.1, RNA1509_23554, RNA1509_26020, RNA1509_45590, RNA1509_54066} {RNA1509_23554, RNA1509_26020, RNA1509_45590, RNA1509_54066, RNA815_25095}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29879

558

11.63

Mlig455_019059, Mlig455_064343

Neo: -

Age: logFC(26M/2M)=-0.301

NR2C2

Mlig455_019059 {REF} {Length: 4531} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=45.9]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [Score=80.9, Expect=3e-16]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [Score=80.9, Expect=3e-16]} {RNA1509_26020} {RNA1310_11731.1} {RNA815_25095}

Mlig455_064343 {REF} {Length: 4642} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=101.6]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=44.5]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [RH, Score=142, Expect=1e-35]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [RH, Score=142, Expect=1e-35]} {Dmel: FBgn0003720, tll, tailless, [Score=133, Expect=2e-33]} {Celegans: WBGene00022423, nhr-41, Nuclear hormone receptor family member nhr-41, [Score=180, Expect=5e-50]} {Smed: dd_Smed_v6_9123_0_1, dd_Smed_v6_9123_0_1, [Score=177, Expect=4e-49]} {RNA1509_23554, RNA1509_26020, RNA1509_45590, RNA1509_54066} {RNA1310_11731.1, RNA1509_23554, RNA1509_26020, RNA1509_45590, RNA1509_54066} {RNA1509_23554, RNA1509_26020, RNA1509_45590, RNA1509_54066, RNA815_25095}

Cumulative graph for MligTC455_29879

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.982	3.971	0.43635	1.00000
RegionR2	-0.186	3.971	0.69374	1.00000
RegionR3	0.409	3.971	0.24229	0.78418
RegionR4	0.821	3.971	0.09408	0.29528
RegionR5	-0.281	3.971	0.40391	0.76182
RegionR6	0.075	3.971	0.84712	1.00000
RegionR7	-0.304	3.971	0.55793	1.00000
RegionR8	-1.516	3.971	0.04233	0.40328

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.892	3.971	0.11214	0.83608
RegenerationR2	0.356	3.971	0.30005	0.74179
RegenerationR3	-0.405	3.971	0.30464	0.73550
RegenerationR4	-0.434	3.971	0.32456	0.76181
RegenerationR5	-0.088	3.971	0.81484	0.99293
RegenerationR6	-0.296	3.971	0.47580	0.78856
RegenerationBL	0.573	3.971	0.33060	0.69685
RegenerationTP	-1.365	3.971	0.09447	0.48199

Genes with expression patterns similar to MligTC455_29879

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29879	558	11.63	Mlig455_019059, Mlig455_064343	Neo: - Age: logFC(26M/2M)=-0.301	NR2C2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_019059 {REF} {Length: 4531} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=45.9]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [Score=80.9, Expect=3e-16]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [Score=80.9, Expect=3e-16]} {RNA1509_26020} {RNA1310_11731.1} {RNA815_25095} Mlig455_064343 {REF} {Length: 4642} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=101.6]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=44.5]} {Human: ENSG00000177463, NR2C2, nuclear receptor subfamily 2 group C member 2, [RH, Score=142, Expect=1e-35]} {Mouse: ENSMUSG00000005893, Nr2c2, nuclear receptor subfamily 2, group C, member 2, [RH, Score=142, Expect=1e-35]} {Dmel: FBgn0003720, tll, tailless, [Score=133, Expect=2e-33]} {Celegans: WBGene00022423, nhr-41, Nuclear hormone receptor family member nhr-41, [Score=180, Expect=5e-50]} {Smed: dd_Smed_v6_9123_0_1, dd_Smed_v6_9123_0_1, [Score=177, Expect=4e-49]} {RNA1509_23554, RNA1509_26020, RNA1509_45590, RNA1509_54066} {RNA1310_11731.1, RNA1509_23554, RNA1509_26020, RNA1509_45590, RNA1509_54066} {RNA1509_23554, RNA1509_26020, RNA1509_45590, RNA1509_54066, RNA815_25095}
2.	MligTC455_51533	3060	63.74	Mlig455_007786	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_007786 {REF} {Length: 3408} {TRANSSPLICED} {RNA1509_1572, RNA1509_25749} {RNA1310_480.1, RNA1509_1572, RNA1509_25749} {RNA1509_1572, RNA1509_25749, RNA815_1360.1}
3.	MligTC455_51236	761	15.85	Mlig455_022790	Neo: - Age: logFC(26M/2M)=-0.317 Region-enriched R4: 2.121/0.01962		0.951	-	-	-	-	0.951	-	Mlig455_022790 {REF} {Length: 2959} {TRANSSPLICED} {RNA1509_44483, RNA1509_49000, RNA1509_6911} {RNA1310_8893.2, RNA1509_44483, RNA1509_49000, RNA1509_6911} {RNA1509_44483, RNA1509_49000, RNA1509_6911, RNA815_2961.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts