TomoSeq data search

Data search

Results for MligTC455_29958

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29958

35

0.74

Mlig455_024061

Neo: -

Age: -

ADGRL3

Mlig455_024061 {REF} {Length: 3861} {Pfam: GPCR proteolysis site, GPS, motif [PF01825.23, score=48.0]} {Human: ENSG00000150471, ADGRL3, adhesion G protein-coupled receptor L3, [Score=72.0, Expect=2e-12]} {Mouse: ENSMUSG00000037605, Adgrl3, adhesion G protein-coupled receptor L3, [Score=72.8, Expect=9e-13]} {Dmel: FBgn0033313, Cirl, Calcium-independent receptor for alpha-latrotoxin, [Score=53.9, Expect=5e-07]} {Celegans: WBGene00002252, lat-2, Latrophilin-like protein LAT-2, [Score=50.4, Expect=4e-06]} {RNA1509_50956} {RNA1310_84599} {RNA815_44392}

Cumulative graph for MligTC455_29958

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.357	1.072	0.99945	1.00000
RegionR2	2.299	1.072	0.56794	0.92918
RegionR3	0.189	1.072	0.72018	1.00000
RegionR4	-2.299	1.072	0.99814	1.00000
RegionR5	-0.326	1.072	0.94237	1.00000
RegionR6	2.505	1.072	0.12109	0.63435
RegionR7	0.443	1.072	1.00000	1.00000
RegionR8	0.546	1.072	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.834	1.072	0.99980	1.00000
RegenerationR2	5.003	1.072	0.00743	0.13721
RegenerationR3	4.063	1.072	0.04669	0.37658
RegenerationR4	4.056	1.072	0.05531	0.37748
RegenerationR5	2.957	1.072	0.06721	0.40841
RegenerationR6	0.789	1.072	0.41870	0.75002
RegenerationBL	3.103	1.072	0.17393	0.49980
RegenerationTP	5.424	1.072	0.03565	0.31515

Genes with expression patterns similar to MligTC455_29958

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29958	35	0.74	Mlig455_024061	Neo: - Age: -	ADGRL3	2	-	-	-	-	1.000	1.000	Mlig455_024061 {REF} {Length: 3861} {Pfam: GPCR proteolysis site, GPS, motif [PF01825.23, score=48.0]} {Human: ENSG00000150471, ADGRL3, adhesion G protein-coupled receptor L3, [Score=72.0, Expect=2e-12]} {Mouse: ENSMUSG00000037605, Adgrl3, adhesion G protein-coupled receptor L3, [Score=72.8, Expect=9e-13]} {Dmel: FBgn0033313, Cirl, Calcium-independent receptor for alpha-latrotoxin, [Score=53.9, Expect=5e-07]} {Celegans: WBGene00002252, lat-2, Latrophilin-like protein LAT-2, [Score=50.4, Expect=4e-06]} {RNA1509_50956} {RNA1310_84599} {RNA815_44392}
2.	MligTC455_49458	193	4.02	Mlig455_007046	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.702 Region-enriched R2: 2.765/0.02131		0.981	-	-	-	-	0.981	-	Mlig455_007046 {REF} {Length: 4313} {RNA1509_28094, RNA1509_51918} {RNA1310_17588, RNA1509_28094, RNA1509_51918} {RNA1509_28094, RNA1509_51918, RNA815_13401}
3.	MligTC455_41673	26	0.54	Mlig455_035834	Neo: - Age: -		0.978	-	-	-	-	-	0.978	Mlig455_035834 {REF} {Length: 1561} {NoTransDecoderORF} {RNA1310_64046} {RNA815_37581}
4.	MligTC455_25940	29	0.6	Mlig455_003190	Neo: - Age: -		0.975	-	-	-	-	-	0.975	Mlig455_003190 {REF} {Length: 606} {NoTransDecoderORF} {RNA1509_41508} {RNA1310_23482} {RNA815_49293}
5.	MligTC455_24855	72	1.5	Mlig455_044777, Mlig455_053676	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_044777 {REF} {Length: 1840} {NoTransDecoderORF} {RNA1509_47921} {RNA1310_90646} {RNA815_8730.1} Mlig455_053676 {REF} {Length: 1840} {NoTransDecoderORF} {RNA1509_47921} {RNA1310_90646} {RNA815_8730.1}
6.	MligTC455_29262	96	2	Mlig455_038249	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.738		0.968	-	-	-	-	-	0.968	Mlig455_038249 {REF} {Length: 8932} {RNA1509_25125, RNA1509_25587, RNA1509_9188} {RNA1310_234.1, RNA1509_25125, RNA1509_25587} {RNA1509_25125, RNA1509_25587, RNA815_23.1}
7.	MligTC455_38749	34	0.71	Mlig455_041321	Neo: - Age: Up-Down-Down	AP3M1	0.968	-	-	-	-	-	0.968	Mlig455_041321 {REF} {Length: 4665} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=81.9]; Muniscin C-terminal mu homology domain [PF10291.11, score=22.2]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [Score=140, Expect=5e-40]; ENSG00000070718, AP3M2, adaptor related protein complex 3 subunit mu 2, [Score=136, Expect=2e-38]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [Score=140, Expect=6e-42]; ENSMUSG00000031539, Ap3m2, adaptor-related protein complex 3, mu 2 subunit, [Score=139, Expect=2e-39]} {Dmel: FBgn0000330, cm, carmine, [Score=130, Expect=3e-36]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [Score=122, Expect=1e-33]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [Score=99.0, Expect=9e-25]} {RNA1509_37010} {RNA1310_17840} {RNA815_13395}
8.	MligTC455_36906	32	0.66	Mlig455_005733	Neo: - Age: -		0.966	-	-	-	-	-	0.966	Mlig455_005733 {REF} {Length: 1217} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_31059} {RNA815_21848}
9.	MligTC455_22436	36	0.75	Mlig455_051770	Neo: Irradiation Age: Up-Down-Up		0.964	-	-	-	-	-	0.964	Mlig455_051770 {REF} {Length: 3154} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=57.5]} {RNA1509_14174} {RNA1310_11133} {RNA815_3873.1}
10.	MligTC455_33891	42	0.88	Mlig455_066091	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_066091 {REF} {Length: 263} {NoTransDecoderORF} {RNA1509_22875} {RNA1310_33397} {RNA815_53515}
11.	MligTC455_15990	53	1.1	Mlig455_053183	Neo: - Age: -		0.96	-	-	-	-	-	0.960	Mlig455_053183 {REF} {Length: 1875} {RNA1310_81425}
12.	MligTC455_27092	670	13.96	Mlig455_000378	Neo: - Age: Up-Down-Down		0.958	-	-	-	-	0.958	-	Mlig455_000378 {REF} {Length: 2011} {RNA1509_2754} {RNA1310_36150} {RNA815_12527}
13.	MligTC455_29264	78	1.62	Mlig455_061707	Neo: - Age: logFC(26M/2M)=1.238		0.957	-	-	-	-	-	0.957	Mlig455_061707 {REF} {Length: 5671} {Pfam: Zinc knuckle [PF00098.25, score=33.9]} {Celegans: WBGene00017210, F07E5.5, [Score=53.5, Expect=3e-07]} {RNA1509_12781} {RNA1310_541.1} {RNA815_23.1}
14.	MligTC455_01365	11	0.23	Mlig455_028201	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_028201 {REF} {Length: 220} {NoTransDecoderORF}
15.	MligTC455_06211	52	1.09	Mlig455_053942	Neo: Int S/G2/M Age: -		0.955	-	-	-	-	-	0.955	Mlig455_053942 {REF} {Length: 1329} {NoTransDecoderORF} {RNA1509_48102} {RNA1310_24234.1} {RNA815_9984}
16.	MligTC455_29955	501	10.43	Mlig455_010450	Neo: Germline Age: Up-Down-Down Region-specific R4: 4.638	NF1	0.954	-	-	-	-	0.954	-	Mlig455_010450 {REF} {Length: 13730} {Pfam: GTPase-activator protein for Ras-like GTPase [PF00616.21, score=95.8]; Divergent CRAL/TRIO domain [PF13716.8, score=66.4]; Cell morphogenesis central region [PF14228.8, score=20.4]; Cell morphogenesis C-terminal [PF14225.8, score=19.8]} {Human: ENSG00000196712, NF1, neurofibromin 1, [RH, Score=1657, Expect=0.0]} {Mouse: ENSMUSG00000020716, Nf1, neurofibromin 1, [RH, Score=1654, Expect=0.0]} {Dmel: FBgn0015269, Nf1, Neurofibromin 1, [RH, Score=1657, Expect=0.0]} {Celegans: WBGene00001516, gap-2, Ras GTPase-activating protein gap-2, [Score=111, Expect=3e-24]} {Smed: dd_Smed_v6_7869_0_1, dd_Smed_v6_7869_0_1, [RH, Score=1264, Expect=0.0]} {RNA1509_42561, RNA1509_4635, RNA1509_50821, RNA1509_51605, RNA1509_6183} {RNA1310_196, RNA1509_42561, RNA1509_4635, RNA1509_50821, RNA1509_51605, RNA1509_6183} {RNA1509_42561, RNA1509_4635, RNA1509_50821, RNA1509_51605, RNA1509_6183, RNA815_3437}
17.	MligTC455_01791	37	0.78	Mlig455_005666	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_005666 {REF} {Length: 933} {Pfam: Cell division protein ZapB [PF06005.14, score=21.1]}
18.	MligTC455_37441	157	3.28	Mlig455_055697	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_055697 {REF} {Length: 2393} {RNA1509_10526} {RNA1310_31711} {RNA815_17406}
19.	MligTC455_14466	57	1.19	Mlig455_049619	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_049619 {REF} {Length: 711}

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