TomoSeq data search

Data search

Results for MligTC455_30006

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30006	36	0.74	Mlig455_010767	Neo: - Age: Up-Down-Up	APBA2	Mlig455_010767 {REF} {Length: 3320} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=95.2]; PDZ domain [PF00595.26, score=72.4]; PDZ domain [PF17820.3, score=45.3]; PDZ domain [PF13180.8, score=18.9]} {Human: ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [Score=345, Expect=5e-109]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [Score=345, Expect=5e-109]; ENSG00000011132, APBA3, amyloid beta precursor protein binding family A member 3, [Score=344, Expect=3e-110]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [Score=341, Expect=5e-111]; ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [Score=340, Expect=6e-106]} {Mouse: ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [Score=345, Expect=6e-109]; ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [Score=339, Expect=1e-105]} {Dmel: FBgn0052677, X11Lbeta, [Score=349, Expect=9e-105]} {Celegans: WBGene00002999, lin-10, [Score=349, Expect=6e-109]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [Score=382, Expect=2e-124]} {RNA1310_41730} {RNA815_53791}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30006

0.74

Mlig455_010767

Neo: -

Age: Up-Down-Up

APBA2

Mlig455_010767 {REF} {Length: 3320} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=95.2]; PDZ domain [PF00595.26, score=72.4]; PDZ domain [PF17820.3, score=45.3]; PDZ domain [PF13180.8, score=18.9]} {Human: ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [Score=345, Expect=5e-109]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [Score=345, Expect=5e-109]; ENSG00000011132, APBA3, amyloid beta precursor protein binding family A member 3, [Score=344, Expect=3e-110]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [Score=341, Expect=5e-111]; ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [Score=340, Expect=6e-106]} {Mouse: ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [Score=345, Expect=6e-109]; ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [Score=339, Expect=1e-105]} {Dmel: FBgn0052677, X11Lbeta, [Score=349, Expect=9e-105]} {Celegans: WBGene00002999, lin-10, [Score=349, Expect=6e-109]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [Score=382, Expect=2e-124]} {RNA1310_41730} {RNA815_53791}

Cumulative graph for MligTC455_30006

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.75	0.683	0.99968	1.00000
RegionR2	3.306	0.683	0.06268	0.30210
RegionR3	2.527	0.683	0.15151	0.65891
RegionR4	-2.221	0.683	0.99971	1.00000
RegionR5	-2.329	0.683	0.99927	1.00000
RegionR6	-1.192	0.683	0.99943	1.00000
RegionR7	-0.568	0.683	1.00000	1.00000
RegionR8	5.227	0.683	0.00675	0.15003

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.475	0.683	1.00000	1.00000
RegenerationR2	-1.393	0.683	0.66832	0.94437
RegenerationR3	-0.041	0.683	0.78216	0.97607
RegenerationR4	2.254	0.683	0.51560	0.87776
RegenerationR5	2.775	0.683	0.33862	0.75679
RegenerationR6	1.19	0.683	0.99985	1.00000
RegenerationBL	-1.255	0.683	1.00000	1.00000
RegenerationTP	-1.854	0.683	0.99956	1.00000

Genes with expression patterns similar to MligTC455_30006

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30006	36	0.74	Mlig455_010767	Neo: - Age: Up-Down-Up	APBA2	2	-	1.000	-	-	1.000	-	Mlig455_010767 {REF} {Length: 3320} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=95.2]; PDZ domain [PF00595.26, score=72.4]; PDZ domain [PF17820.3, score=45.3]; PDZ domain [PF13180.8, score=18.9]} {Human: ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [Score=345, Expect=5e-109]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [Score=345, Expect=5e-109]; ENSG00000011132, APBA3, amyloid beta precursor protein binding family A member 3, [Score=344, Expect=3e-110]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [Score=341, Expect=5e-111]; ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [Score=340, Expect=6e-106]} {Mouse: ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [Score=345, Expect=6e-109]; ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [Score=339, Expect=1e-105]} {Dmel: FBgn0052677, X11Lbeta, [Score=349, Expect=9e-105]} {Celegans: WBGene00002999, lin-10, [Score=349, Expect=6e-109]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [Score=382, Expect=2e-124]} {RNA1310_41730} {RNA815_53791}
2.	MligTC455_20263	15	0.31	Mlig455_019451	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_019451 {REF} {Length: 1503} {NoTransDecoderORF} {RNA1509_12552} {RNA1310_16663} {RNA815_9855}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts