TomoSeq data search

Data search

Results for MligTC455_30046

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30046

464

9.68

Mlig455_000635

Neo: -

Age: -

Region-enriched R7: 3.850/0.00000

LTBP2

Mlig455_000635 {REF} {Length: 6232} {Pfam: Calcium-binding EGF domain [PF07645.17, score=81.0]; Complement Clr-like EGF-like [PF12662.9, score=35.4]; EGF-like domain [PF00008.29, score=19.4]; EGF domain [PF12947.9, score=18.7]} {Human: ENSG00000119681, LTBP2, latent transforming growth factor beta binding protein 2, [Score=130, Expect=2e-29]} {Mouse: ENSMUSG00000002020, Ltbp2, latent transforming growth factor beta binding protein 2, [Score=124, Expect=9e-28]} {Dmel: FBgn0035798, frac, faulty attraction, [Score=99.8, Expect=2e-20]} {Celegans: WBGene00003497, mup-4, Transmembrane matrix receptor MUP-4, [Score=98.6, Expect=3e-20]} {Smed: dd_Smed_v6_2649_0_1, dd_Smed_v6_2649_0_1, [Score=107, Expect=6e-23]} {RNA1509_5079} {RNA1310_710} {RNA815_417}

Cumulative graph for MligTC455_30046

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.977	3.548	0.05048	0.52994
RegionR2	1.715	3.548	0.05406	0.27828
RegionR3	1.095	3.548	0.18806	0.72388
RegionR4	-2.04	3.548	0.99922	1.00000
RegionR5	-0.289	3.548	0.92406	1.00000
RegionR6	1.797	3.548	0.01113	0.17961
RegionR7	3.85	3.548	0.00000	0.00000
RegionR8	0.849	3.548	0.48561	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	7.136	3.548	0.08090	0.77668
RegenerationR2	-0.288	3.548	0.60309	0.91714
RegenerationR3	0.783	3.548	0.19941	0.63409
RegenerationR4	1.247	3.548	0.06932	0.41920
RegenerationR5	0.122	3.548	0.84409	1.00000
RegenerationR6	-0.262	3.548	0.65901	0.90277
RegenerationBL	-1.054	3.548	0.13382	0.43573
RegenerationTP	-0.256	3.548	0.73960	1.00000

Genes with expression patterns similar to MligTC455_30046

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30046	464	9.68	Mlig455_000635	Neo: - Age: - Region-enriched R7: 3.850/0.00000	LTBP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000635 {REF} {Length: 6232} {Pfam: Calcium-binding EGF domain [PF07645.17, score=81.0]; Complement Clr-like EGF-like [PF12662.9, score=35.4]; EGF-like domain [PF00008.29, score=19.4]; EGF domain [PF12947.9, score=18.7]} {Human: ENSG00000119681, LTBP2, latent transforming growth factor beta binding protein 2, [Score=130, Expect=2e-29]} {Mouse: ENSMUSG00000002020, Ltbp2, latent transforming growth factor beta binding protein 2, [Score=124, Expect=9e-28]} {Dmel: FBgn0035798, frac, faulty attraction, [Score=99.8, Expect=2e-20]} {Celegans: WBGene00003497, mup-4, Transmembrane matrix receptor MUP-4, [Score=98.6, Expect=3e-20]} {Smed: dd_Smed_v6_2649_0_1, dd_Smed_v6_2649_0_1, [Score=107, Expect=6e-23]} {RNA1509_5079} {RNA1310_710} {RNA815_417}
2.	MligTC455_25181	2947	61.4	Mlig455_016583, Mlig455_016639, Mlig455_035594, Mlig455_035605, Mlig455_051883	Neo: - Age: logFC(26M/2M)=-0.369 Region-enriched R7: 3.379/0.00000 Regeneration-downregulated BL: -3.511 Regeneration-depleted BL: -3.511		4.392	0.918	0.898	0.874	0.953	-	0.749	Mlig455_016583 {REF} {Length: 2083} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_016639 {REF} {Length: 2081} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=20.8]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=63.5, Expect=2e-12]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_035594 {REF} {Length: 986} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.8, Expect=3e-19]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223} Mlig455_035605 {REF} {Length: 2250} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.0, Expect=6e-19]} {RNA1509_58072} {RNA1310_28969} {RNA815_14223} Mlig455_051883 {REF} {Length: 914} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223}
3.	MligTC455_17352	236	4.92	Mlig455_005319, Mlig455_067547	Neo: - Age: Up-Down-Down Region-enriched R7: 5.135/0.00000		3.199	0.776	0.736	0.721	0.966	-	-	Mlig455_005319 {REF} {Length: 3293} {Pfam: Vestigial/Tondu family [PF07545.16, score=18.9]} {RNA1509_49139} {RNA1310_16041, RNA1509_49139} {RNA1509_49139, RNA815_36708} Mlig455_067547 {REF} {Length: 2521} {Pfam: Vestigial/Tondu family [PF07545.16, score=19.0]} {RNA1509_49139} {RNA1310_16041} {RNA815_36708}
4.	MligTC455_45008	629	13.1	Mlig455_016672	Neo: - Age: logFC(26M/2M)=-0.566 Region-enriched R7: 2.290/0.00017 Region-enriched R6: 1.566/0.02986		2.683	0.872	0.851	-	0.960	-	-	Mlig455_016672 {REF} {Length: 1196} {RNA1509_41773} {RNA1310_50243, RNA1509_41773} {RNA1509_41773, RNA815_30201}
5.	MligTC455_16689	406	8.45	Mlig455_057134	Neo: - Age: - Region-enriched R7: 3.135/0.00000 Region-enriched R6: 1.447/0.04004 Regeneration-downregulated BL: -3.116 Regeneration-depleted BL: -3.116		2.635	-	0.775	0.961	-	-	0.899	Mlig455_057134 {REF} {Length: 2836} {RNA1509_22940} {RNA1310_37294, RNA1509_22940} {RNA1509_22940, RNA815_33151}
6.	MligTC455_03803	364	7.58	Mlig455_053227, Mlig455_065046	Neo: - Age: Up-Down-Down Region-enriched R7: 3.052/0.00004 Regeneration-downregulated BL: -3.099 Regeneration-depleted BL: -3.099	CRACR2A	2.562	-	0.785	-	0.958	-	0.819	Mlig455_053227 {REF} {Length: 1663} {Pfam: EF-hand domain pair [PF13499.8, score=35.4]; EF-hand domain [PF13405.8, score=31.1]; EF hand [PF00036.34, score=30.6]; EF-hand domain pair [PF13833.8, score=30.3]} {Human: ENSG00000130038, CRACR2A, calcium release activated channel regulator 2A, [Score=142, Expect=1e-38]} {Mouse: ENSMUSG00000061414, Cracr2a, calcium release activated channel regulator 2A, [Score=142, Expect=3e-37]} {Smed: dd_Smed_v6_2966_0_1, dd_Smed_v6_2966_0_1, [Score=168, Expect=5e-47]} {RNA1509_20561} {RNA1310_2186} {RNA815_7541} Mlig455_065046 {REF} {Length: 5354} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=173.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.0]; ADP-ribosylation factor family [PF00025.23, score=64.9]; 50S ribosome-binding GTPase [PF01926.25, score=35.5]; EF-hand domain pair [PF13499.8, score=33.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=30.6]; EF-hand domain [PF13405.8, score=29.1]; EF hand [PF00036.34, score=28.4]; EF-hand domain pair [PF13833.8, score=27.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.7]} {Human: ENSG00000130038, CRACR2A, calcium release activated channel regulator 2A, [RH, Score=190, Expect=2e-50]} {Mouse: ENSMUSG00000061414, Cracr2a, calcium release activated channel regulator 2A, [RH, Score=186, Expect=3e-49]} {Dmel: FBgn0051118, RabX4, [Score=156, Expect=2e-43]} {Celegans: WBGene00007067, 4R79.2, Rab-44, [RH, Score=204, Expect=2e-58]} {Smed: dd_Smed_v6_2966_0_1, dd_Smed_v6_2966_0_1, [RH, Score=260, Expect=2e-76]} {RNA1509_20561} {RNA1310_2186, RNA1509_20561} {RNA1509_20561, RNA815_7541}
7.	MligTC455_16943	3243	67.57	Mlig455_015939, Mlig455_059704	Neo: - Age: logFC(26M/2M)=-0.433 Region-enriched R7: 1.287/0.00682 Region-enriched R6: 1.072/0.03826 Regeneration-downregulated BL: -2.106 Regeneration-depleted BL: -2.106		1.894	-	-	-	0.951	-	0.943	Mlig455_015939 {REF} {Length: 1575} {RNA1509_17366} {RNA1310_24251} {RNA815_10435} Mlig455_059704 {REF} {Length: 2179} {RNA1509_17366} {RNA1310_24251, RNA1509_17366} {RNA1509_17366, RNA815_10435}
8.	MligTC455_43308	515	10.73	Mlig455_007837, Mlig455_021119	Neo: - Age: - Region-enriched R7: 4.797/0.00000		1.812	-	0.842	-	0.970	-	-	Mlig455_007837 {REF} {Length: 466} {RNA1310_58059} {RNA815_34499} Mlig455_021119 {REF} {Length: 472} {RNA1310_58059} {RNA815_34499}
9.	MligTC455_45009	149	3.1	Mlig455_056345, Mlig455_056356	Neo: - Age: Down-Up-Up Region-enriched R7: 4.060/0.00000		1.742	0.952	-	-	-	-	0.790	Mlig455_056345 {REF} {Length: 1235} {RNA1509_41773} {RNA1310_50243} {RNA815_30201} Mlig455_056356 {REF} {Length: 1340} {RNA1509_41773} {RNA1310_50243} {RNA815_30201}
10.	MligTC455_38827	168	3.49	Mlig455_065185	Neo: - Age: - Region-enriched R8: 3.346/0.01415	RDX	1.709	-	-	-	0.967	-	0.742	Mlig455_065185 {REF} {Length: 3409} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=106.5]; FERM C-terminal PH-like domain [PF09380.12, score=87.8]; FERM central domain [PF00373.20, score=83.0]; FERM N-terminal domain [PF09379.12, score=66.5]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=589, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=577, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=561, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=586, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=557, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=514, Expect=5e-174]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=545, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=504, Expect=7e-172]} {RNA1509_50666} {RNA1310_19690} {RNA815_6880}
11.	MligTC455_15500	74	1.54	Mlig455_044618	Neo: - Age: -	GABBR2	1.67	-	-	-	0.958	-	0.712	Mlig455_044618 {REF} {Length: 2484} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=138.4]; Receptor family ligand binding region [PF01094.30, score=57.8]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=184, Expect=2e-48]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=182, Expect=8e-48]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=173, Expect=9e-45]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=165, Expect=1e-42]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=122, Expect=4e-31]} {RNA1310_32095} {RNA815_22947}
12.	MligTC455_18353	30	0.63	Mlig455_003583	Neo: - Age: -		1.662	0.955	0.707	-	-	-	-	Mlig455_003583 {REF} {Length: 714} {NoTransDecoderORF} {RNA1310_70732} {RNA815_40532}
13.	MligTC455_14926	19	0.39	Mlig455_016619	Neo: - Age: -		0.972	-	-	-	0.972	-	-	Mlig455_016619 {REF} {Length: 1819} {NoTransDecoderORF} {RNA1310_92064}
14.	MligTC455_18857	62	1.28	Mlig455_061927	Neo: - Age: Up-Down-Up		0.968	-	-	-	0.968	-	-	Mlig455_061927 {REF} {Length: 6008} {RNA1509_41127} {RNA1310_30860} {RNA815_18104}
15.	MligTC455_04421	629	13.1	Mlig455_008660, Mlig455_008671	Neo: - Age: - Region-enriched R8: 2.627/0.01190 Region-enriched R7: 2.553/0.00144 Region-enriched R3: 2.011/0.01226		0.963	-	-	-	0.963	-	-	Mlig455_008660 {REF} {Length: 2329} {Pfam: Major Facilitator Superfamily [PF07690.18, score=85.4]; MFS/sugar transport protein [PF13347.8, score=44.4]; MFS_1 like family [PF12832.9, score=35.8]; PUCC protein [PF03209.17, score=34.8]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [RH, Score=471, Expect=4e-162]} {RNA1509_18256} {RNA1310_12968} {RNA815_5192} Mlig455_008671 {REF} {Length: 2325} {Pfam: Major Facilitator Superfamily [PF07690.18, score=83.3]; MFS/sugar transport protein [PF13347.8, score=44.8]; MFS_1 like family [PF12832.9, score=35.3]; PUCC protein [PF03209.17, score=34.7]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [RH, Score=468, Expect=1e-160]} {RNA1509_18256} {RNA1310_12968, RNA1509_18256} {RNA1509_18256, RNA815_5192}
16.	MligTC455_38826	244	5.08	Mlig455_059316	Neo: - Age: Up-Down-Up Region-enriched R8: 3.511/0.00478	RDX	0.957	-	-	-	0.957	-	-	Mlig455_059316 {REF} {Length: 3395} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=106.5]; FERM C-terminal PH-like domain [PF09380.12, score=87.8]; FERM central domain [PF00373.20, score=83.0]; FERM N-terminal domain [PF09379.12, score=66.5]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=589, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=577, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=561, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=586, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=557, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=514, Expect=5e-174]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=545, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=504, Expect=7e-172]} {RNA1509_50666} {RNA1310_19690} {RNA815_6880}

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