Data search


search
Exact
Search

Results for MligTC455_30164

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30164 6 0.13 Mlig455_066170

Neo: -

Age: -

NCSTN Mlig455_066170 {REF} {Length: 3033} {TRANSSPLICED} {Pfam: Nicastrin small lobe [PF18266.3, score=90.5]; Nicastrin [PF05450.17, score=89.2]} {Human: ENSG00000162736, NCSTN, nicastrin, [RH, Score=163, Expect=2e-41]} {Mouse: ENSMUSG00000003458, Ncstn, nicastrin, [RH, Score=152, Expect=6e-38]} {Dmel: FBgn0039234, Nct, Nicastrin, [RH, Score=141, Expect=1e-34]} {Celegans: WBGene00000148, aph-2, Nicastrin, [RH, Score=109, Expect=1e-24]} {Smed: dd_Smed_v6_1685_0_1, dd_Smed_v6_1685_0_1, [RH, Score=155, Expect=1e-39]} {RNA1509_5633} {RNA1310_6134} {RNA815_3195.1}

Cumulative graph for MligTC455_30164

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_30164

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30164 6 0.13 Mlig455_066170

Neo: -

Age: -

NCSTN 1 - - - - 1.000 - Mlig455_066170 {REF} {Length: 3033} {TRANSSPLICED} {Pfam: Nicastrin small lobe [PF18266.3, score=90.5]; Nicastrin [PF05450.17, score=89.2]} {Human: ENSG00000162736, NCSTN, nicastrin, [RH, Score=163, Expect=2e-41]} {Mouse: ENSMUSG00000003458, Ncstn, nicastrin, [RH, Score=152, Expect=6e-38]} {Dmel: FBgn0039234, Nct, Nicastrin, [RH, Score=141, Expect=1e-34]} {Celegans: WBGene00000148, aph-2, Nicastrin, [RH, Score=109, Expect=1e-24]} {Smed: dd_Smed_v6_1685_0_1, dd_Smed_v6_1685_0_1, [RH, Score=155, Expect=1e-39]} {RNA1509_5633} {RNA1310_6134} {RNA815_3195.1}
2. MligTC455_09875 17 0.35 Mlig455_060894

Neo: -

Age: -

0.986 - - - - 0.986 - Mlig455_060894 {REF} {Length: 505} {NoTransDecoderORF} {RNA1310_130927}
3. MligTC455_21860 6 0.12 Mlig455_010976

Neo: -

Age: -

0.975 - - - - 0.975 - Mlig455_010976 {REF} {Length: 359} {NoTransDecoderORF}
4. MligTC455_28382 14 0.29 Mlig455_040555

Neo: -

Age: -

ALKBH3 0.975 - - - - 0.975 - Mlig455_040555 {REF} {Length: 3636} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=62.8]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=86.7, Expect=4e-18]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=82.0, Expect=9e-17]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=73.2, Expect=5e-14]} {RNA1509_23004} {RNA1310_13243} {RNA815_38989}
5. MligTC455_40543 23 0.48 Mlig455_040704

Neo: -

Age: -

0.968 - - - - 0.968 - Mlig455_040704 {REF} {Length: 524} {NoTransDecoderORF} {RNA1310_108311}
6. MligTC455_13719 16 0.33 Mlig455_001255, Mlig455_059950

Neo: -

Age: -

0.965 - - - - 0.965 -

Mlig455_001255 {REF} {Length: 2660}

Mlig455_059950 {REF} {Length: 2483}
7. MligTC455_14857 21 0.43 Mlig455_014926

Neo: -

Age: -

0.965 - - - - 0.965 - Mlig455_014926 {REF} {Length: 368} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_57743.2} {RNA815_45547}
8. MligTC455_15863 27 0.56 Mlig455_034725

Neo: -

Age: Up-Down-Up

0.961 - - - - 0.961 - Mlig455_034725 {REF} {Length: 2861} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.8]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=53.1, Expect=4e-07]} {Smed: dd_Smed_v6_15920_0_1, dd_Smed_v6_15920_0_1, [RH, Score=288, Expect=9e-91]} {RNA1509_34117} {RNA1310_14316} {RNA815_5722}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA