Data search


search
Exact
Search

Results for MligTC455_30183

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30183 135 2.80 Mlig455_032249

Neo: -

Age: -

MAP3K19 Mlig455_032249 {REF} {Length: 2475} {Pfam: Protein kinase domain [PF00069.27, score=157.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.9]; Ankyrin repeats (3 copies) [PF12796.9, score=93.7]; Ankyrin repeat [PF00023.32, score=53.4]; Ankyrin repeats (many copies) [PF13857.8, score=50.6]; Ankyrin repeat [PF13606.8, score=49.9]; Ankyrin repeats (many copies) [PF13637.8, score=45.8]; Fungal protein kinase [PF17667.3, score=26.5]; ABC1 atypical kinase-like domain [PF03109.18, score=20.9]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=124, Expect=1e-29]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=119, Expect=4e-28]} {Dmel: FBgn0024329, Mekk1, [Score=121, Expect=5e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=109, Expect=2e-24]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=115, Expect=2e-26]} {RNA1509_50660} {RNA1310_12895} {RNA815_7040}

Cumulative graph for MligTC455_30183

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.625 2.195 0.63554 1.00000
RegionR2 0.161 2.195 0.73407 1.00000
RegionR3 2.004 2.195 0.01096 0.16312
RegionR4 -0.516 2.195 0.91649 1.00000
RegionR5 -0.246 2.195 0.84995 1.00000
RegionR6 1.151 2.195 0.17969 0.74315
RegionR7 -4.409 2.195 0.09440 0.58794
RegionR8 1.23 2.195 0.42577 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.601 2.195 0.31719 1.00000
RegenerationR2 -0.124 2.195 0.90404 1.00000
RegenerationR3 -1.109 2.195 0.15259 0.58232
RegenerationR4 0.554 2.195 0.50107 0.87015
RegenerationR5 0.52 2.195 0.49408 0.85540
RegenerationR6 0.443 2.195 0.57939 0.85734
RegenerationBL 1.592 2.195 0.24695 0.60178
RegenerationTP 2.257 2.195 0.20867 0.65055


Genes with expression patterns similar to MligTC455_30183

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30183 135 2.8 Mlig455_032249

Neo: -

Age: -

MAP3K19 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_032249 {REF} {Length: 2475} {Pfam: Protein kinase domain [PF00069.27, score=157.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.9]; Ankyrin repeats (3 copies) [PF12796.9, score=93.7]; Ankyrin repeat [PF00023.32, score=53.4]; Ankyrin repeats (many copies) [PF13857.8, score=50.6]; Ankyrin repeat [PF13606.8, score=49.9]; Ankyrin repeats (many copies) [PF13637.8, score=45.8]; Fungal protein kinase [PF17667.3, score=26.5]; ABC1 atypical kinase-like domain [PF03109.18, score=20.9]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=124, Expect=1e-29]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=119, Expect=4e-28]} {Dmel: FBgn0024329, Mekk1, [Score=121, Expect=5e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=109, Expect=2e-24]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=115, Expect=2e-26]} {RNA1509_50660} {RNA1310_12895} {RNA815_7040}
2. MligTC455_30988 39 0.82 Mlig455_035558

Neo: -

Age: logFC(26M/2M)=0.399

F5 1.68 - - - 0.964 - 0.716 Mlig455_035558 {REF} {Length: 3392} {Human: ENSG00000198734, F5, coagulation factor V, [Score=71.6, Expect=2e-12]} {RNA1509_28476} {RNA1310_33359} {RNA815_5738.1}
3. MligTC455_15365 15 0.3 Mlig455_060332

Neo: -

Age: -

0.97 - - - 0.970 - - Mlig455_060332 {REF} {Length: 978} {RNA1310_84789}
4. MligTC455_11291 42 0.88 Mlig455_009149

Neo: Int S/G2/M

Age: -

MPV17L2 0.968 - - - 0.968 - - Mlig455_009149 {REF} {Length: 819} {TRANSSPLICED} {Pfam: Mpv17 / PMP22 family [PF04117.14, score=56.2]} {Human: ENSG00000254858, MPV17L2, MPV17 mitochondrial inner membrane protein like 2, [Score=102, Expect=1e-26]} {Mouse: ENSMUSG00000111476, Mpv17l2, MPV17 mitochondrial membrane protein-like 2, [RH, Score=102, Expect=9e-27]; ENSMUSG00000035559, Mpv17l2, MPV17 mitochondrial membrane protein-like 2, [RH, Score=102, Expect=9e-27]} {Dmel: FBgn0030481, CG1662, [RH, Score=137, Expect=5e-40]} {Celegans: WBGene00022744, ZK470.1, [RH, Score=85.5, Expect=8e-21]} {Smed: dd_Smed_v6_8288_0_1, dd_Smed_v6_8288_0_1, [RH, Score=106, Expect=9e-29]} {RNA1509_17272, RNA1509_21202, RNA1509_22178} {RNA1310_31500, RNA1509_17272, RNA1509_21202} {RNA1509_17272, RNA1509_21202, RNA815_20641}
5. MligTC455_38706 61 1.27 Mlig455_058644

Neo: -

Age: -

Region-enriched R5: 2.583/0.03446

KLHL3 0.961 - - - 0.961 - - Mlig455_058644 {REF} {Length: 2539} {Pfam: Kelch motif [PF01344.27, score=168.9]; Kelch motif [PF13964.8, score=86.0]; Kelch motif [PF07646.17, score=48.7]; Galactose oxidase, central domain [PF13418.8, score=48.6]; Galactose oxidase, central domain [PF13415.8, score=47.8]; Glyoxal oxidase N-terminus [PF07250.13, score=19.3]} {Human: ENSG00000146021, KLHL3, kelch like family member 3, [Score=242, Expect=1e-76]} {Mouse: ENSMUSG00000014164, Klhl3, kelch-like 3, [Score=242, Expect=1e-76]} {Dmel: FBgn0001301, kel, kelch, [Score=236, Expect=1e-73]} {Celegans: WBGene00002184, kel-1, KELch-repeat containing protein; Kel-1 protein, [Score=147, Expect=5e-41]} {Smed: dd_Smed_v6_5640_0_1, dd_Smed_v6_5640_0_1, [Score=241, Expect=3e-76]} {RNA1509_34588} {RNA1310_10869} {RNA815_1277.1}
6. MligTC455_38723 909 18.93 Mlig455_045064

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.453

PANK4 0.96 - - - 0.960 - - Mlig455_045064 {REF} {Length: 1568} {Pfam: Fumble [PF03630.16, score=135.4]} {Human: ENSG00000157881, PANK4, pantothenate kinase 4, [Score=106, Expect=3e-24]; ENSG00000273494, PANK4, pantothenate kinase 4, [Score=106, Expect=3e-24]} {Mouse: ENSMUSG00000018846, Pank3, pantothenate kinase 3, [Score=79.0, Expect=7e-16]; ENSMUSG00000033610, Pank1, pantothenate kinase 1, [Score=77.8, Expect=2e-15]} {Dmel: FBgn0011205, fbl, fumble, [Score=90.5, Expect=4e-20]} {Smed: dd_Smed_v6_2075_0_1, dd_Smed_v6_2075_0_1, [RH, Score=230, Expect=1e-72]} {RNA1509_29195, RNA1509_51737} {RNA1310_44453, RNA1509_29195, RNA1509_51737} {RNA1509_29195, RNA1509_51737, RNA815_9614}
7. MligTC455_19753 15 0.31 Mlig455_045567

Neo: -

Age: logFC(26M/2M)=2.837

RPS17 0.958 - - - 0.958 - - Mlig455_045567 {REF} {Length: 376} {TRANSSPLICED} {Pfam: Ribosomal S17 [PF00833.20, score=199.0]} {Human: ENSG00000182774, RPS17, ribosomal protein S17, [Score=206, Expect=3e-67]; ENSG00000278229, RPS17, ribosomal protein S17, [Score=206, Expect=3e-67]; ENSG00000260836, AC245033.1, novel protein, [Score=204, Expect=3e-61]} {Mouse: ENSMUSG00000061787, Rps17, ribosomal protein S17, [Score=206, Expect=1e-67]} {Dmel: FBgn0005533, RpS17, Ribosomal protein S17, [Score=171, Expect=8e-54]} {Celegans: WBGene00004486, rps-17, 40S ribosomal protein S17, [Score=176, Expect=4e-56]} {Smed: dd_Smed_v6_195_0_1, dd_Smed_v6_195_0_1, [Score=172, Expect=9e-55]} {RNA1509_16259} {RNA1310_42445} {RNA815_20996}
8. MligTC455_38061 112 2.33 Mlig455_003183, Mlig455_003385

Neo: -

Age: Down-Up-Down

Region-enriched R4: 3.963/0.00323
Region-enriched R3: 2.923/0.03513

SLC22A5 0.957 - - - 0.957 - -

Mlig455_003183 {REF} {Length: 2030} {Pfam: Sugar (and other) transporter [PF00083.26, score=94.4]; Major Facilitator Superfamily [PF07690.18, score=79.2]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=251, Expect=1e-75]; ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=247, Expect=3e-74]} {Mouse: ENSMUSG00000020334, Slc22a4, solute carrier family 22 (organic cation transporter), member 4, [Score=250, Expect=1e-75]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=248, Expect=2e-74]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=272, Expect=3e-84]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=233, Expect=4e-69]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=211, Expect=3e-61]} {RNA1310_28487} {RNA815_52073}

Mlig455_003385 {REF} {Length: 2374} {Pfam: Major Facilitator Superfamily [PF07690.18, score=37.9]; Sugar (and other) transporter [PF00083.26, score=28.3]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=113, Expect=5e-26]; ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=111, Expect=2e-25]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=110, Expect=2e-25]; ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=107, Expect=2e-24]; ENSMUSG00000020334, Slc22a4, solute carrier family 22 (organic cation transporter), member 4, [Score=105, Expect=7e-24]} {Dmel: FBgn0086365, Orct2, Organic cation transporter 2, [Score=134, Expect=1e-33]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=100, Expect=3e-22]} {RNA1310_28487} {RNA815_52073}
9. MligTC455_22231 40 0.84 Mlig455_032140

Neo: -

Age: -

0.954 - - - 0.954 - - Mlig455_032140 {REF} {Length: 3501} {NoTransDecoderORF} {RNA1509_38388} {RNA1310_14332} {RNA815_16291}
10. MligTC455_50285 189 3.93 Mlig455_007767

Neo: -

Age: Down-Up-Up

LENG1 0.953 - - - - 0.953 - Mlig455_007767 {REF} {Length: 1311} {TRANSSPLICED} {Pfam: N-terminal domain of CBF1 interacting co-repressor CIR [PF10197.11, score=33.9]} {Human: ENSG00000105617, LENG1, leukocyte receptor cluster member 1, [Score=88.6, Expect=3e-20]} {Mouse: ENSMUSG00000078813, Leng1, leukocyte receptor cluster (LRC) member 1, [Score=55.5, Expect=1e-08]} {Dmel: FBgn0037809, CG12818, [RH, Score=79.3, Expect=5e-17]} {Smed: dd_Smed_v6_7939_0_1, dd_Smed_v6_7939_0_1, [Score=62.4, Expect=2e-11]} {RNA1509_27956} {RNA1310_27973, RNA1509_27956} {RNA1509_27956, RNA815_32915}
11. MligTC455_52450 1579 32.89 Mlig455_000119

Neo: -

Age: logFC(26M/2M)=0.275

Region-enriched R4: 1.401/0.02633

0.952 - - - 0.952 - - Mlig455_000119 {REF} {Length: 2142} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=70.3]} {RNA1509_1907, RNA1509_19429, RNA1509_6458} {RNA1310_12956, RNA1509_19429, RNA1509_6458} {RNA1509_19429, RNA1509_6458, RNA815_4763}
12. MligTC455_36668 52 1.08 Mlig455_020415

Neo: -

Age: -

0.95 - - - 0.950 - - Mlig455_020415 {REF} {Length: 1590} {RNA1310_29239.3} {RNA815_18923}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA