TomoSeq data search

Data search

Results for MligTC455_30315

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30315	5770	120.22	Mlig455_016659	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.562	TUBB3	Mlig455_016659 {REF} {Length: 2424} {TRANSSPLICED} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=236.6]; Tubulin C-terminal domain [PF03953.19, score=147.0]; Misato Segment II tubulin-like domain [PF10644.11, score=22.9]} {Human: ENSG00000258947, TUBB3, tubulin beta 3 class III, [RH, Score=836, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [RH, Score=813, Expect=0.0]} {Mouse: ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [RH, Score=835, Expect=0.0]} {Dmel: FBgn0003889, betaTub85D, beta-Tubulin at 85D, [RH, Score=839, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=852, Expect=0.0]} {Smed: dd_Smed_v6_83_0_2, dd_Smed_v6_83_0_2, [Score=854, Expect=0.0]} {RNA1509_14740, RNA1509_16057, RNA1509_24183, RNA1509_32382, RNA1509_33143, RNA1509_42980, RNA1509_53009, RNA1509_56081, RNA1509_900} {RNA1310_15130.1, RNA1509_14740, RNA1509_16057, RNA1509_24183, RNA1509_32382, RNA1509_33143, RNA1509_42980, RNA1509_53009, RNA1509_56081} {RNA1509_14740, RNA1509_16057, RNA1509_24183, RNA1509_32382, RNA1509_33143, RNA1509_42980, RNA1509_53009, RNA1509_56081, RNA815_1610.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30315

5770

120.22

Mlig455_016659

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.562

TUBB3

Mlig455_016659 {REF} {Length: 2424} {TRANSSPLICED} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=236.6]; Tubulin C-terminal domain [PF03953.19, score=147.0]; Misato Segment II tubulin-like domain [PF10644.11, score=22.9]} {Human: ENSG00000258947, TUBB3, tubulin beta 3 class III, [RH, Score=836, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [RH, Score=813, Expect=0.0]} {Mouse: ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [RH, Score=835, Expect=0.0]} {Dmel: FBgn0003889, betaTub85D, beta-Tubulin at 85D, [RH, Score=839, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=852, Expect=0.0]} {Smed: dd_Smed_v6_83_0_2, dd_Smed_v6_83_0_2, [Score=854, Expect=0.0]} {RNA1509_14740, RNA1509_16057, RNA1509_24183, RNA1509_32382, RNA1509_33143, RNA1509_42980, RNA1509_53009, RNA1509_56081, RNA1509_900} {RNA1310_15130.1, RNA1509_14740, RNA1509_16057, RNA1509_24183, RNA1509_32382, RNA1509_33143, RNA1509_42980, RNA1509_53009, RNA1509_56081} {RNA1509_14740, RNA1509_16057, RNA1509_24183, RNA1509_32382, RNA1509_33143, RNA1509_42980, RNA1509_53009, RNA1509_56081, RNA815_1610.1}

Cumulative graph for MligTC455_30315

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.703	7.005	0.14524	0.75828
RegionR2	0.021	7.005	0.94828	1.00000
RegionR3	0.125	7.005	0.65154	1.00000
RegionR4	0.201	7.005	0.51692	0.84227
RegionR5	0.731	7.005	0.00426	0.03067
RegionR6	0.728	7.005	0.00615	0.12445
RegionR7	-0.536	7.005	0.08140	0.54892
RegionR8	-0.567	7.005	0.10356	0.60176

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.082	7.005	0.89437	1.00000
RegenerationR2	0.27	7.005	0.42702	0.83205
RegenerationR3	0.066	7.005	0.85127	0.99878
RegenerationR4	0.214	7.005	0.55184	0.89329
RegenerationR5	0.119	7.005	0.73179	0.96456
RegenerationR6	-0.316	7.005	0.36522	0.70896
RegenerationBL	-0.838	7.005	0.01610	0.13434
RegenerationTP	0.265	7.005	0.45476	0.87106

Genes with expression patterns similar to MligTC455_30315

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30315	5770	120.22	Mlig455_016659	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.562	TUBB3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016659 {REF} {Length: 2424} {TRANSSPLICED} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=236.6]; Tubulin C-terminal domain [PF03953.19, score=147.0]; Misato Segment II tubulin-like domain [PF10644.11, score=22.9]} {Human: ENSG00000258947, TUBB3, tubulin beta 3 class III, [RH, Score=836, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [RH, Score=813, Expect=0.0]} {Mouse: ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [RH, Score=835, Expect=0.0]} {Dmel: FBgn0003889, betaTub85D, beta-Tubulin at 85D, [RH, Score=839, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=852, Expect=0.0]} {Smed: dd_Smed_v6_83_0_2, dd_Smed_v6_83_0_2, [Score=854, Expect=0.0]} {RNA1509_14740, RNA1509_16057, RNA1509_24183, RNA1509_32382, RNA1509_33143, RNA1509_42980, RNA1509_53009, RNA1509_56081, RNA1509_900} {RNA1310_15130.1, RNA1509_14740, RNA1509_16057, RNA1509_24183, RNA1509_32382, RNA1509_33143, RNA1509_42980, RNA1509_53009, RNA1509_56081} {RNA1509_14740, RNA1509_16057, RNA1509_24183, RNA1509_32382, RNA1509_33143, RNA1509_42980, RNA1509_53009, RNA1509_56081, RNA815_1610.1}
2.	MligTC455_16055	461	9.61	Mlig455_014262	Neo: - Age: -	PGS1	1.666	-	-	-	-	0.958	0.708	Mlig455_014262 {REF} {Length: 2189} {TRANSSPLICED} {Pfam: PLD-like domain [PF13091.8, score=54.1]; Phospholipase D Active site motif [PF00614.24, score=31.5]} {Human: ENSG00000087157, PGS1, phosphatidylglycerophosphate synthase 1, [RH, Score=275, Expect=4e-86]} {Mouse: ENSMUSG00000017715, Pgs1, phosphatidylglycerophosphate synthase 1, [RH, Score=272, Expect=4e-85]} {Dmel: FBgn0038649, CG7718, [RH, Score=282, Expect=8e-90]} {Celegans: WBGene00021677, pgs-1, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, [RH, Score=263, Expect=6e-83]} {Smed: dd_Smed_v6_2703_0_1, dd_Smed_v6_2703_0_1, [RH, Score=264, Expect=2e-83]} {RNA1509_24334} {RNA1310_17121, RNA1509_24334} {RNA1509_24334, RNA815_14063}
3.	MligTC455_42449	678	14.13	Mlig455_041812	Neo: - Age: Down-Up-Down	MRAS	0.958	-	-	0.958	-	-	-	Mlig455_041812 {REF} {Length: 1522} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=152.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=68.8]; ADP-ribosylation factor family [PF00025.23, score=34.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=34.8]; 50S ribosome-binding GTPase [PF01926.25, score=22.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=18.3]} {Human: ENSG00000158186, MRAS, muscle RAS oncogene homolog, [Score=223, Expect=6e-74]} {Mouse: ENSMUSG00000032470, Mras, muscle and microspikes RAS, [Score=221, Expect=1e-73]} {Dmel: FBgn0265605, Ric, Ras-related protein interacting with calmodulin, [Score=166, Expect=4e-51]} {Celegans: WBGene00004311, ras-2, GTP binding protein; R-RAS related, [Score=224, Expect=8e-75]} {Smed: dd_Smed_v6_8100_0_2, dd_Smed_v6_8100_0_2, [Score=196, Expect=8e-64]} {RNA1509_34936} {RNA1310_19797} {RNA815_6725.2}
4.	MligTC455_27951	109	2.27	Mlig455_051049	Neo: - Age: -	SLC17A5	0.95	-	-	-	-	0.950	-	Mlig455_051049 {REF} {Length: 4351} {Pfam: Major Facilitator Superfamily [PF07690.18, score=160.4]; Sugar (and other) transporter [PF00083.26, score=32.8]} {Human: ENSG00000119899, SLC17A5, solute carrier family 17 member 5, [RH, Score=363, Expect=3e-120]} {Mouse: ENSMUSG00000049624, Slc17a5, solute carrier family 17 (anion/sugar transporter), member 5, [Score=342, Expect=3e-112]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [Score=340, Expect=2e-110]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=330, Expect=1e-106]} {Dmel: FBgn0030452, MFS10, Major Facilitator Superfamily Transporter 10, [RH, Score=371, Expect=5e-123]} {Celegans: WBGene00008000, slc-17.2, Uncharacterized transporter slc-17.2, [Score=293, Expect=2e-93]} {Smed: dd_Smed_v6_1874_0_1, dd_Smed_v6_1874_0_1, [RH, Score=347, Expect=3e-114]} {RNA1509_20478} {RNA1310_14525} {RNA815_29510}