TomoSeq data search

Data search

Results for MligTC455_30391

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30391	216	4.51	Mlig455_024034, Mlig455_046298, Mlig455_061520, Mlig455_070667	Neo: - Age: Down-Down-Up	TRAF6	Mlig455_024034 {REF} {Length: 2845} {Pfam: TRAF-type zinc finger [PF02176.20, score=31.1]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=63.5, Expect=6e-11]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=62.4, Expect=9e-11]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=73.2, Expect=9e-15]} {RNA1509_36404} {RNA1310_40308} {RNA815_4476.1} Mlig455_046298 {REF} {Length: 1832} {Pfam: TRAF-type zinc finger [PF02176.20, score=45.9]; Acetyl-coA carboxylase zinc finger domain [PF17848.3, score=22.6]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=84.0, Expect=9e-18]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=83.2, Expect=1e-17]; ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=82.4, Expect=2e-17]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=85.5, Expect=7e-19]} {RNA1509_16871} {RNA1310_40308} {RNA815_9291} Mlig455_061520 {REF} {Length: 2386} {Pfam: TRAF-type zinc finger [PF02176.20, score=38.4]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=96.3, Expect=3e-20]} {Mouse: ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=89.7, Expect=3e-18]; ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=88.2, Expect=1e-17]; ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=88.2, Expect=8e-18]} {Smed: dd_Smed_v6_4392_0_1, dd_Smed_v6_4392_0_1, [Score=95.1, Expect=2e-20]} {RNA1509_16871} {RNA1310_10374.2} {RNA815_9291} Mlig455_070667 {REF} {Length: 2402} {Pfam: TRAF-type zinc finger [PF02176.20, score=52.7]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=90.9, Expect=2e-18]; ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=89.7, Expect=5e-18]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=93.6, Expect=2e-19]; ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=92.8, Expect=2e-19]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=98.2, Expect=1e-21]} {RNA1509_41116} {RNA1310_10374.1} {RNA815_7741}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30391

216

4.51

Mlig455_024034, Mlig455_046298, Mlig455_061520, Mlig455_070667

Neo: -

Age: Down-Down-Up

TRAF6

Mlig455_024034 {REF} {Length: 2845} {Pfam: TRAF-type zinc finger [PF02176.20, score=31.1]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=63.5, Expect=6e-11]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=62.4, Expect=9e-11]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=73.2, Expect=9e-15]} {RNA1509_36404} {RNA1310_40308} {RNA815_4476.1}

Mlig455_046298 {REF} {Length: 1832} {Pfam: TRAF-type zinc finger [PF02176.20, score=45.9]; Acetyl-coA carboxylase zinc finger domain [PF17848.3, score=22.6]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=84.0, Expect=9e-18]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=83.2, Expect=1e-17]; ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=82.4, Expect=2e-17]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=85.5, Expect=7e-19]} {RNA1509_16871} {RNA1310_40308} {RNA815_9291}

Mlig455_061520 {REF} {Length: 2386} {Pfam: TRAF-type zinc finger [PF02176.20, score=38.4]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=96.3, Expect=3e-20]} {Mouse: ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=89.7, Expect=3e-18]; ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=88.2, Expect=1e-17]; ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=88.2, Expect=8e-18]} {Smed: dd_Smed_v6_4392_0_1, dd_Smed_v6_4392_0_1, [Score=95.1, Expect=2e-20]} {RNA1509_16871} {RNA1310_10374.2} {RNA815_9291}

Mlig455_070667 {REF} {Length: 2402} {Pfam: TRAF-type zinc finger [PF02176.20, score=52.7]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=90.9, Expect=2e-18]; ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=89.7, Expect=5e-18]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=93.6, Expect=2e-19]; ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=92.8, Expect=2e-19]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=98.2, Expect=1e-21]} {RNA1509_41116} {RNA1310_10374.1} {RNA815_7741}

Cumulative graph for MligTC455_30391

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.895	2.8	0.31463	0.96410
RegionR2	-0.212	2.8	0.91485	1.00000
RegionR3	0.199	2.8	0.78259	1.00000
RegionR4	1.977	2.8	0.08937	0.28516
RegionR5	0.134	2.8	0.80959	1.00000
RegionR6	0.917	2.8	0.38602	0.96301
RegionR7	1.682	2.8	0.12307	0.66158
RegionR8	0.197	2.8	0.80520	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.133	2.8	1.00000	1.00000
RegenerationR2	0.977	2.8	0.26107	0.70780
RegenerationR3	0.965	2.8	0.31258	0.74304
RegenerationR4	-0.303	2.8	0.74988	0.97002
RegenerationR5	-0.164	2.8	0.85940	1.00000
RegenerationR6	0.356	2.8	0.71942	0.93513
RegenerationBL	-0.994	2.8	0.37784	0.74647
RegenerationTP	-0.062	2.8	0.94837	1.00000

Genes with expression patterns similar to MligTC455_30391

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30391	216	4.51	Mlig455_024034, Mlig455_046298, Mlig455_061520, Mlig455_070667	Neo: - Age: Down-Down-Up	TRAF6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024034 {REF} {Length: 2845} {Pfam: TRAF-type zinc finger [PF02176.20, score=31.1]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=63.5, Expect=6e-11]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=62.4, Expect=9e-11]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=73.2, Expect=9e-15]} {RNA1509_36404} {RNA1310_40308} {RNA815_4476.1} Mlig455_046298 {REF} {Length: 1832} {Pfam: TRAF-type zinc finger [PF02176.20, score=45.9]; Acetyl-coA carboxylase zinc finger domain [PF17848.3, score=22.6]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=84.0, Expect=9e-18]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=83.2, Expect=1e-17]; ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=82.4, Expect=2e-17]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=85.5, Expect=7e-19]} {RNA1509_16871} {RNA1310_40308} {RNA815_9291} Mlig455_061520 {REF} {Length: 2386} {Pfam: TRAF-type zinc finger [PF02176.20, score=38.4]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=96.3, Expect=3e-20]} {Mouse: ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=89.7, Expect=3e-18]; ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=88.2, Expect=1e-17]; ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=88.2, Expect=8e-18]} {Smed: dd_Smed_v6_4392_0_1, dd_Smed_v6_4392_0_1, [Score=95.1, Expect=2e-20]} {RNA1509_16871} {RNA1310_10374.2} {RNA815_9291} Mlig455_070667 {REF} {Length: 2402} {Pfam: TRAF-type zinc finger [PF02176.20, score=52.7]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=90.9, Expect=2e-18]; ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=89.7, Expect=5e-18]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=93.6, Expect=2e-19]; ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=92.8, Expect=2e-19]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=98.2, Expect=1e-21]} {RNA1509_41116} {RNA1310_10374.1} {RNA815_7741}
2.	MligTC455_30389	116	2.41	Mlig455_029602	Neo: - Age: -		5.68	0.970	0.873	0.977	0.959	0.935	0.966	Mlig455_029602 {REF} {Length: 2395} {RNA1509_16871} {RNA1310_10374.1} {RNA815_9291}
3.	MligTC455_30390	144	3	Mlig455_070663	Neo: - Age: Up-Down-Down	TRAF6	4.668	0.902	-	0.942	0.955	0.895	0.974	Mlig455_070663 {REF} {Length: 2869} {Pfam: TRAF-type zinc finger [PF02176.20, score=37.7]; WD domain, G-beta repeat [PF00400.34, score=19.6]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=92.8, Expect=5e-19]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=90.1, Expect=2e-18]; ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=89.7, Expect=4e-18]; ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=87.8, Expect=1e-17]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=97.1, Expect=4e-21]} {RNA1509_41116} {RNA1310_9652.1, RNA1509_41116} {RNA1509_41116, RNA815_7741}
4.	MligTC455_24682	17	0.36	Mlig455_071042	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_071042 {REF} {Length: 5149} {RNA1509_34740} {RNA1310_6113.1} {RNA815_6593}
5.	MligTC455_23818	346	7.22	Mlig455_017619	Neo: - Age: Up-Down-Down	MEGF8	0.959	-	-	-	0.959	-	-	Mlig455_017619 {REF} {Length: 10161} {TRANSSPLICED} {Pfam: Kelch motif [PF13854.8, score=47.9]; Laminin EGF domain [PF00053.26, score=36.6]; EGF domain [PF12947.9, score=34.7]; Galactose oxidase, central domain [PF13418.8, score=30.1]; Calcium-binding EGF domain [PF07645.17, score=27.0]; Human growth factor-like EGF [PF12661.9, score=26.6]; EGF-like domain [PF00008.29, score=23.8]; Plexin repeat [PF01437.27, score=19.2]} {Human: ENSG00000105429, MEGF8, multiple EGF like domains 8, [Score=508, Expect=3e-146]} {Mouse: ENSMUSG00000045039, Megf8, multiple EGF-like-domains 8, [Score=538, Expect=5e-156]} {Dmel: FBgn0031981, CG7466, [Score=504, Expect=6e-145]} {Celegans: WBGene00006787, unc-52, Basement membrane proteoglycan, [Score=68.2, Expect=7e-11]} {Smed: dd_Smed_v6_9737_0_1, dd_Smed_v6_9737_0_1, [Score=61.6, Expect=3e-09]} {RNA1509_3629, RNA1509_53359} {RNA1310_138.1, RNA1509_53359} {RNA1509_53359, RNA815_1847.1}
6.	MligTC455_01648	4	0.08	Mlig455_065106	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_065106 {REF} {Length: 495} {NoTransDecoderORF} {RNA1310_110067} {RNA815_57749}