TomoSeq data search

Data search

Results for MligTC455_30414

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30414	13	0.28	Mlig455_027904, Mlig455_047779	Neo: - Age: -	CDKN2C	Mlig455_027904 {REF} {Length: 5369} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.3]; Ankyrin repeats (many copies) [PF13637.8, score=34.8]; Ankyrin repeat [PF00023.32, score=34.4]; Ankyrin repeat [PF13606.8, score=33.1]; Ankyrin repeats (many copies) [PF13857.8, score=27.2]} {Human: ENSG00000123080, CDKN2C, cyclin dependent kinase inhibitor 2C, [Score=46.6, Expect=4e-06]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=48.9, Expect=7e-07]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502} Mlig455_047779 {REF} {Length: 1237} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.2]; Ankyrin repeats (many copies) [PF13637.8, score=34.8]; Ankyrin repeat [PF00023.32, score=33.7]; Ankyrin repeat [PF13606.8, score=33.0]; Ankyrin repeats (many copies) [PF13857.8, score=27.6]} {Human: ENSG00000123080, CDKN2C, cyclin dependent kinase inhibitor 2C, [Score=45.8, Expect=7e-06]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=48.5, Expect=1e-06]} {RNA1509_26758} {RNA1310_10050} {RNA815_10088.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30414

0.28

Mlig455_027904, Mlig455_047779

Neo: -

Age: -

CDKN2C

Mlig455_027904 {REF} {Length: 5369} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.3]; Ankyrin repeats (many copies) [PF13637.8, score=34.8]; Ankyrin repeat [PF00023.32, score=34.4]; Ankyrin repeat [PF13606.8, score=33.1]; Ankyrin repeats (many copies) [PF13857.8, score=27.2]} {Human: ENSG00000123080, CDKN2C, cyclin dependent kinase inhibitor 2C, [Score=46.6, Expect=4e-06]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=48.9, Expect=7e-07]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502}

Mlig455_047779 {REF} {Length: 1237} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.2]; Ankyrin repeats (many copies) [PF13637.8, score=34.8]; Ankyrin repeat [PF00023.32, score=33.7]; Ankyrin repeat [PF13606.8, score=33.0]; Ankyrin repeats (many copies) [PF13857.8, score=27.6]} {Human: ENSG00000123080, CDKN2C, cyclin dependent kinase inhibitor 2C, [Score=45.8, Expect=7e-06]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=48.5, Expect=1e-06]} {RNA1509_26758} {RNA1310_10050} {RNA815_10088.2}

Cumulative graph for MligTC455_30414

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.894	0.627	0.99996	1.00000
RegionR2	3.55	0.627	1.00000	1.00000
RegionR3	-0.096	0.627	0.99992	1.00000
RegionR4	-1.568	0.627	0.99978	1.00000
RegionR5	-0.94	0.627	0.99987	1.00000
RegionR6	-0.629	0.627	0.99988	1.00000
RegionR7	-0.301	0.627	0.99989	1.00000
RegionR8	0.879	0.627	0.99992	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.37	0.627	0.99995	1.00000
RegenerationR2	-2.755	0.627	0.00273	0.07885
RegenerationR3	0.91	0.627	0.99959	1.00000
RegenerationR4	0.559	0.627	0.99963	1.00000
RegenerationR5	-0.773	0.627	0.99969	1.00000
RegenerationR6	1.114	0.627	0.99974	1.00000
RegenerationBL	-2.472	0.627	0.99992	1.00000
RegenerationTP	-1.137	0.627	0.99992	1.00000

Genes with expression patterns similar to MligTC455_30414

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30414	13	0.28	Mlig455_027904, Mlig455_047779	Neo: - Age: -	CDKN2C	1	-	-	-	-	1.000	-	Mlig455_027904 {REF} {Length: 5369} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.3]; Ankyrin repeats (many copies) [PF13637.8, score=34.8]; Ankyrin repeat [PF00023.32, score=34.4]; Ankyrin repeat [PF13606.8, score=33.1]; Ankyrin repeats (many copies) [PF13857.8, score=27.2]} {Human: ENSG00000123080, CDKN2C, cyclin dependent kinase inhibitor 2C, [Score=46.6, Expect=4e-06]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=48.9, Expect=7e-07]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502} Mlig455_047779 {REF} {Length: 1237} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.2]; Ankyrin repeats (many copies) [PF13637.8, score=34.8]; Ankyrin repeat [PF00023.32, score=33.7]; Ankyrin repeat [PF13606.8, score=33.0]; Ankyrin repeats (many copies) [PF13857.8, score=27.6]} {Human: ENSG00000123080, CDKN2C, cyclin dependent kinase inhibitor 2C, [Score=45.8, Expect=7e-06]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=48.5, Expect=1e-06]} {RNA1509_26758} {RNA1310_10050} {RNA815_10088.2}
2.	MligTC455_50853	70	1.46	Mlig455_032032	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.224 Region-enriched R3: 4.394/0.01527		0.951	-	-	-	-	0.951	-	Mlig455_032032 {REF} {Length: 978} {RNA1310_43094.1} {RNA815_28977}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts