Data search


search
Exact
Search

Results for MligTC455_30442

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30442 577 12.03 Mlig455_002167, Mlig455_002267, Mlig455_002311, Mlig455_007989, Mlig455_031987, Mlig455_036803

Neo: -

Age: -

CASP8

Mlig455_002167 {REF} {Length: 5536} {Pfam: Caspase domain [PF00656.24, score=105.9]; Ankyrin repeats (3 copies) [PF12796.9, score=86.7]; Ankyrin repeats (many copies) [PF13857.8, score=71.8]; Ankyrin repeats (many copies) [PF13637.8, score=62.7]; Ankyrin repeat [PF00023.32, score=58.9]; Ankyrin repeat [PF13606.8, score=26.0]} {Human: ENSG00000064012, CASP8, caspase 8, [Score=134, Expect=2e-33]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=128, Expect=7e-32]; ENSMUSG00000026029, Casp8, caspase 8, [Score=126, Expect=5e-31]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=103, Expect=4e-24]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=88.6, Expect=2e-19]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=125, Expect=6e-33]} {RNA1509_50227} {RNA1310_16957.1} {RNA815_6820}

Mlig455_002267 {REF} {Length: 2873} {Pfam: Caspase domain [PF00656.24, score=107.9]; Ankyrin repeats (3 copies) [PF12796.9, score=95.5]; Ankyrin repeats (many copies) [PF13857.8, score=66.0]; Ankyrin repeats (many copies) [PF13637.8, score=62.2]; Ankyrin repeat [PF00023.32, score=58.5]; Ankyrin repeat [PF13606.8, score=25.5]} {Human: ENSG00000064012, CASP8, caspase 8, [Score=131, Expect=2e-32]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=125, Expect=9e-31]; ENSMUSG00000026029, Casp8, caspase 8, [Score=124, Expect=5e-30]; ENSMUSG00000031628, Casp3, caspase 3, [Score=122, Expect=6e-31]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=100, Expect=4e-23]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=86.3, Expect=1e-18]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=123, Expect=5e-32]} {RNA1509_20243} {RNA1310_16957.1} {RNA815_6820}

Mlig455_002311 {REF} {Length: 2013} {Pfam: Caspase domain [PF00656.24, score=105.9]; Ankyrin repeats (3 copies) [PF12796.9, score=87.0]; Ankyrin repeats (many copies) [PF13857.8, score=70.0]; Ankyrin repeat [PF00023.32, score=57.6]; Ankyrin repeats (many copies) [PF13637.8, score=53.1]; Ankyrin repeat [PF13606.8, score=27.5]} {Human: ENSG00000064012, CASP8, caspase 8, [Score=134, Expect=1e-33]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=128, Expect=9e-32]; ENSMUSG00000026029, Casp8, caspase 8, [Score=126, Expect=5e-31]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=103, Expect=5e-24]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=126, Expect=4e-33]} {RNA1509_20243} {RNA1310_16957.2} {RNA815_6820}

Mlig455_007989 {REF} {Length: 1961} {NoTransDecoderORF} {RNA1509_50227} {RNA1310_7741.2} {RNA815_2064.1}

Mlig455_031987 {REF} {Length: 1766} {NoTransDecoderORF} {RNA1509_50227} {RNA1310_7741.2} {RNA815_2064.1}

Mlig455_036803 {REF} {Length: 3020} {RNA1509_50227} {RNA1310_7741.2, RNA1509_50227} {RNA1509_50227, RNA815_2064.1}

Cumulative graph for MligTC455_30442

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.134 3.874 0.92458 1.00000
RegionR2 0.325 3.874 0.58700 0.94140
RegionR3 0.471 3.874 0.33122 0.86918
RegionR4 -0.691 3.874 0.27655 0.58328
RegionR5 0.056 3.874 0.89809 1.00000
RegionR6 -0.485 3.874 0.33300 0.92102
RegionR7 -0.56 3.874 0.39447 1.00000
RegionR8 0.75 3.874 0.27406 0.89749

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.376 3.874 0.18779 0.92780
RegenerationR2 0.478 3.874 0.33957 0.77463
RegenerationR3 -1.01 3.874 0.08102 0.46796
RegenerationR4 0.545 3.874 0.37670 0.79921
RegenerationR5 -0.133 3.874 0.80777 0.99065
RegenerationR6 0.042 3.874 0.94366 1.00000
RegenerationBL 1.2 3.874 0.03735 0.21873
RegenerationTP 0.549 3.874 0.40361 0.83163


Genes with expression patterns similar to MligTC455_30442

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30442 577 12.03 Mlig455_002167, Mlig455_002267, Mlig455_002311, Mlig455_007989, Mlig455_031987, Mlig455_036803

Neo: -

Age: -

CASP8 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_002167 {REF} {Length: 5536} {Pfam: Caspase domain [PF00656.24, score=105.9]; Ankyrin repeats (3 copies) [PF12796.9, score=86.7]; Ankyrin repeats (many copies) [PF13857.8, score=71.8]; Ankyrin repeats (many copies) [PF13637.8, score=62.7]; Ankyrin repeat [PF00023.32, score=58.9]; Ankyrin repeat [PF13606.8, score=26.0]} {Human: ENSG00000064012, CASP8, caspase 8, [Score=134, Expect=2e-33]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=128, Expect=7e-32]; ENSMUSG00000026029, Casp8, caspase 8, [Score=126, Expect=5e-31]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=103, Expect=4e-24]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=88.6, Expect=2e-19]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=125, Expect=6e-33]} {RNA1509_50227} {RNA1310_16957.1} {RNA815_6820}

Mlig455_002267 {REF} {Length: 2873} {Pfam: Caspase domain [PF00656.24, score=107.9]; Ankyrin repeats (3 copies) [PF12796.9, score=95.5]; Ankyrin repeats (many copies) [PF13857.8, score=66.0]; Ankyrin repeats (many copies) [PF13637.8, score=62.2]; Ankyrin repeat [PF00023.32, score=58.5]; Ankyrin repeat [PF13606.8, score=25.5]} {Human: ENSG00000064012, CASP8, caspase 8, [Score=131, Expect=2e-32]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=125, Expect=9e-31]; ENSMUSG00000026029, Casp8, caspase 8, [Score=124, Expect=5e-30]; ENSMUSG00000031628, Casp3, caspase 3, [Score=122, Expect=6e-31]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=100, Expect=4e-23]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=86.3, Expect=1e-18]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=123, Expect=5e-32]} {RNA1509_20243} {RNA1310_16957.1} {RNA815_6820}

Mlig455_002311 {REF} {Length: 2013} {Pfam: Caspase domain [PF00656.24, score=105.9]; Ankyrin repeats (3 copies) [PF12796.9, score=87.0]; Ankyrin repeats (many copies) [PF13857.8, score=70.0]; Ankyrin repeat [PF00023.32, score=57.6]; Ankyrin repeats (many copies) [PF13637.8, score=53.1]; Ankyrin repeat [PF13606.8, score=27.5]} {Human: ENSG00000064012, CASP8, caspase 8, [Score=134, Expect=1e-33]} {Mouse: ENSMUSG00000028914, Casp9, caspase 9, [Score=128, Expect=9e-32]; ENSMUSG00000026029, Casp8, caspase 8, [Score=126, Expect=5e-31]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=103, Expect=5e-24]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=126, Expect=4e-33]} {RNA1509_20243} {RNA1310_16957.2} {RNA815_6820}

Mlig455_007989 {REF} {Length: 1961} {NoTransDecoderORF} {RNA1509_50227} {RNA1310_7741.2} {RNA815_2064.1}

Mlig455_031987 {REF} {Length: 1766} {NoTransDecoderORF} {RNA1509_50227} {RNA1310_7741.2} {RNA815_2064.1}

Mlig455_036803 {REF} {Length: 3020} {RNA1509_50227} {RNA1310_7741.2, RNA1509_50227} {RNA1509_50227, RNA815_2064.1}
2. MligTC455_43633 507 10.56 Mlig455_060071

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.631

OFD1 2.539 0.713 - - 0.955 - 0.871 Mlig455_060071 {REF} {Length: 3559} {TRANSSPLICED} {Pfam: LisH [PF16045.7, score=42.8]} {Human: ENSG00000046651, OFD1, OFD1, centriole and centriolar satellite protein, [RH, Score=154, Expect=2e-37]} {Mouse: ENSMUSG00000040586, Ofd1, OFD1, centriole and centriolar satellite protein, [RH, Score=155, Expect=5e-38]} {Smed: dd_Smed_v6_13339_0_1, dd_Smed_v6_13339_0_1, [RH, Score=192, Expect=2e-50]} {RNA1509_3300} {RNA1310_1944.1} {RNA815_5819}
3. MligTC455_52228 111 2.32 Mlig455_006166

Neo: -

Age: Up-Down-Down

CNTROB 1.771 - - - 0.816 0.955 - Mlig455_006166 {REF} {Length: 6691} {TRANSSPLICED} {Human: ENSG00000170037, CNTROB, centrobin, centriole duplication and spindle assembly protein, [Score=56.2, Expect=4e-07]} {Mouse: ENSMUSG00000032782, Cntrob, centrobin, centrosomal BRCA2 interacting protein, [Score=54.3, Expect=1e-06]} {RNA1509_12303} {RNA1310_1966.1, RNA1509_12303} {RNA1509_12303, RNA815_3843.1}
4. MligTC455_14776 28 0.58 Mlig455_030026

Neo: -

Age: -

0.981 - - - - 0.981 - Mlig455_030026 {REF} {Length: 953} {NoTransDecoderORF} {RNA1509_48793} {RNA1310_66116} {RNA815_28542}
5. MligTC455_41702 2176 45.34 Mlig455_055307

Neo: -

Age: Down-Up-Up

CYP2C8 0.973 - - - 0.973 - - Mlig455_055307 {REF} {Length: 2612} {Pfam: Cytochrome P450 [PF00067.24, score=306.8]} {Human: ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=259, Expect=6e-80]} {Mouse: ENSMUSG00000030483, Cyp2b10, cytochrome P450, family 2, subfamily b, polypeptide 10, [Score=257, Expect=2e-79]; ENSMUSG00000040660, Cyp2b9, cytochrome P450, family 2, subfamily b, polypeptide 9, [Score=249, Expect=2e-76]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=247, Expect=2e-75]; ENSMUSG00000040650, Cyp2b23, cytochrome P450, family 2, subfamily b, polypeptide 23, [Score=246, Expect=3e-75]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=246, Expect=1e-74]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=246, Expect=1e-74]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=180, Expect=4e-50]} {Celegans: WBGene00018261, cyp-33C5, CYtochrome P450 family, [Score=221, Expect=7e-66]} {Smed: dd_Smed_v6_2351_0_1, dd_Smed_v6_2351_0_1, [RH, Score=279, Expect=4e-88]} {RNA1509_10256, RNA1509_15694, RNA1509_40717} {RNA1310_11391, RNA1509_10256, RNA1509_15694, RNA1509_40717} {RNA1509_10256, RNA1509_15694, RNA1509_40717, RNA815_585.2}
6. MligTC455_34944 1156 24.08 Mlig455_013886, Mlig455_057723, Mlig455_059963

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.200

GRIA4 0.972 - - - 0.972 - -

Mlig455_013886 {REF} {Length: 4037} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=83.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=61.2]; Ligand-gated ion channel [PF00060.28, score=55.9]} {Human: ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=168, Expect=1e-42]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=164, Expect=3e-41]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=160, Expect=6e-40]} {Mouse: ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=169, Expect=8e-43]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=164, Expect=3e-41]} {Dmel: FBgn0039927, CG11155, [Score=158, Expect=1e-39]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=154, Expect=1e-38]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [RH, Score=194, Expect=6e-52]} {RNA1509_6038} {RNA1310_6598.1} {RNA815_2000.1}

Mlig455_057723 {REF} {Length: 4302} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=83.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=61.3]; Ligand-gated ion channel [PF00060.28, score=55.9]} {Human: ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=169, Expect=1e-42]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=164, Expect=3e-41]} {Mouse: ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=169, Expect=8e-43]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=164, Expect=3e-41]} {Dmel: FBgn0039927, CG11155, [Score=158, Expect=1e-39]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=154, Expect=3e-38]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [RH, Score=194, Expect=7e-52]} {RNA1509_6038} {RNA1310_6598.1, RNA1509_6038} {RNA1509_6038, RNA815_2000.1}

Mlig455_059963 {REF} {Length: 3852} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=83.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=61.3]; Ligand-gated ion channel [PF00060.28, score=56.8]} {Human: ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=168, Expect=1e-42]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=167, Expect=4e-42]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=161, Expect=3e-40]} {Mouse: ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=169, Expect=7e-43]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=167, Expect=3e-42]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=161, Expect=1e-40]} {Dmel: FBgn0039927, CG11155, [Score=159, Expect=5e-40]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=154, Expect=1e-38]} {Smed: dd_Smed_v6_22973_0_1, dd_Smed_v6_22973_0_1, [RH, Score=194, Expect=6e-52]} {RNA1509_6038} {RNA1310_6598.1} {RNA815_2000.1}
7. MligTC455_31973 2859 59.57 Mlig455_048134

Neo: -

Age: -

0.964 - - - 0.964 - - Mlig455_048134 {REF} {Length: 1048} {RNA1509_2693} {RNA1310_43252} {RNA815_9946.1}
8. MligTC455_03538 380 7.91 Mlig455_005673

Neo: -

Age: logFC(26M/2M)=-0.275

Region-enriched R4: 2.162/0.04207

TTLL5 0.962 - - - 0.962 - - Mlig455_005673 {REF} {Length: 5576} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=289.7]; YheC/D like ATP-grasp [PF14398.8, score=27.4]; Sugar-transfer associated ATP-grasp [PF14397.8, score=20.3]} {Human: ENSG00000119685, TTLL5, tubulin tyrosine ligase like 5, [RH, Score=624, Expect=0.0]} {Mouse: ENSMUSG00000012609, Ttll5, tubulin tyrosine ligase-like family, member 5, [RH, Score=627, Expect=0.0]} {Dmel: FBgn0051108, CG31108, [RH, Score=448, Expect=3e-141]} {Celegans: WBGene00008331, ttll-5, Tubulin Tyrosine Ligase Like, [RH, Score=331, Expect=5e-100]} {Smed: dd_Smed_v6_6390_0_1, dd_Smed_v6_6390_0_1, [RH, Score=747, Expect=0.0]} {RNA1509_10958} {RNA1310_2819} {RNA815_8454}
9. MligTC455_51163 305 6.36 Mlig455_018635

Neo: Irradiation

Age: logFC(26M/2M)=-0.314

SLC2A3 0.959 - - - 0.959 - - Mlig455_018635 {REF} {Length: 3028} {Pfam: Sugar (and other) transporter [PF00083.26, score=355.8]; Major Facilitator Superfamily [PF07690.18, score=48.0]} {Human: ENSG00000059804, SLC2A3, solute carrier family 2 member 3, [Score=263, Expect=4e-81]; ENSG00000117394, SLC2A1, solute carrier family 2 member 1, [Score=259, Expect=2e-79]; ENSG00000173262, SLC2A14, solute carrier family 2 member 14, [Score=251, Expect=3e-76]} {Mouse: ENSMUSG00000028645, Slc2a1, solute carrier family 2 (facilitated glucose transporter), member 1, [Score=259, Expect=1e-79]; ENSMUSG00000003153, Slc2a3, solute carrier family 2 (facilitated glucose transporter), member 3, [Score=249, Expect=5e-76]} {Dmel: FBgn0264574, Glut1, Glucose transporter 1, [Score=261, Expect=1e-80]} {Celegans: WBGene00019207, fgt-1, Facilitated glucose transporter protein 1, [Score=216, Expect=2e-63]} {Smed: dd_Smed_v6_3190_0_1, dd_Smed_v6_3190_0_1, [RH, Score=506, Expect=2e-175]} {RNA1509_3276} {RNA1310_6347} {RNA815_1667}
10. MligTC455_41701 1374 28.63 Mlig455_055263

Neo: -

Age: -

CYP2C8 0.955 - - - 0.955 - - Mlig455_055263 {REF} {Length: 2238} {Pfam: Cytochrome P450 [PF00067.24, score=239.3]} {Human: ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=217, Expect=3e-64]} {Mouse: ENSMUSG00000030483, Cyp2b10, cytochrome P450, family 2, subfamily b, polypeptide 10, [Score=210, Expect=5e-62]; ENSMUSG00000040660, Cyp2b9, cytochrome P450, family 2, subfamily b, polypeptide 9, [Score=205, Expect=6e-60]; ENSMUSG00000060407, Cyp2a12, cytochrome P450, family 2, subfamily a, polypeptide 12, [Score=201, Expect=1e-58]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=150, Expect=2e-39]} {Celegans: WBGene00018261, cyp-33C5, CYtochrome P450 family, [Score=177, Expect=9e-50]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=244, Expect=7e-75]} {RNA1509_15694} {RNA1310_11391} {RNA815_585.2}
11. MligTC455_22199 446 9.28 Mlig455_054328

Neo: -

Age: logFC(26M/2M)=-0.358

DCDC1 0.951 - - - 0.951 - - Mlig455_054328 {REF} {Length: 7417} {Pfam: Cep120 protein [PF12416.10, score=36.0]; Doublecortin [PF03607.19, score=29.7]} {Human: ENSG00000170959, DCDC1, doublecortin domain containing 1, [Score=132, Expect=7e-32]} {Smed: dd_Smed_v6_11770_0_1, dd_Smed_v6_11770_0_1, [Score=213, Expect=3e-59]} {RNA1509_1192, RNA1509_53568} {RNA1310_347, RNA1509_53568} {RNA1509_53568, RNA815_115}
12. MligTC455_30422 232 4.83 Mlig455_065090

Neo: -

Age: Down-Up-Up

0.951 - - - 0.951 - - Mlig455_065090 {REF} {Length: 1254} {RNA1509_42925} {RNA1310_34216} {RNA815_4396.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA