Data search


search
Exact
Search

Results for MligTC455_30450

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30450 616 12.84 Mlig455_045841

Neo: -

Age: -

TTC5 Mlig455_045841 {REF} {Length: 2648} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat protein 5 OB fold domain [PF16669.7, score=82.6]; Tetratricopeptide repeat [PF07719.19, score=41.6]; Tetratricopeptide repeat [PF00515.30, score=38.5]; Tetratricopeptide repeat [PF14559.8, score=37.1]; Tetratricopeptide repeat [PF13371.8, score=33.0]; TPR repeat [PF13414.8, score=29.8]; Tetratricopeptide repeat [PF13428.8, score=25.7]; Tetratricopeptide repeat [PF13432.8, score=19.9]} {Human: ENSG00000136319, TTC5, tetratricopeptide repeat domain 5, [RH, Score=267, Expect=1e-84]} {Mouse: ENSMUSG00000006288, Ttc5, tetratricopeptide repeat domain 5, [RH, Score=268, Expect=5e-85]} {Smed: dd_Smed_v6_2772_0_1, dd_Smed_v6_2772_0_1, [RH, Score=254, Expect=2e-79]} {RNA1509_10849, RNA1509_45056, RNA1509_59967} {RNA1310_9696.1, RNA1509_10849, RNA1509_45056, RNA1509_59967} {RNA1509_10849, RNA1509_45056, RNA1509_59967, RNA815_3371}

Cumulative graph for MligTC455_30450

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.479 4.007 0.66452 1.00000
RegionR2 0.587 4.007 0.15461 0.49202
RegionR3 0.133 4.007 0.69647 1.00000
RegionR4 0.349 4.007 0.38659 0.71180
RegionR5 0.307 4.007 0.31306 0.65208
RegionR6 -0.322 4.007 0.39109 0.96541
RegionR7 -0.146 4.007 0.75642 1.00000
RegionR8 -0.429 4.007 0.46553 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.423 4.007 0.15161 0.89409
RegenerationR2 -0.112 4.007 0.72324 0.96331
RegenerationR3 0.361 4.007 0.32815 0.75442
RegenerationR4 0.13 4.007 0.73785 0.96705
RegenerationR5 0.017 4.007 0.95865 1.00000
RegenerationR6 0.449 4.007 0.27221 0.62219
RegenerationBL 0.472 4.007 0.34673 0.71405
RegenerationTP -0.002 4.007 0.99767 1.00000


Genes with expression patterns similar to MligTC455_30450

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30450 616 12.84 Mlig455_045841

Neo: -

Age: -

TTC5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_045841 {REF} {Length: 2648} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat protein 5 OB fold domain [PF16669.7, score=82.6]; Tetratricopeptide repeat [PF07719.19, score=41.6]; Tetratricopeptide repeat [PF00515.30, score=38.5]; Tetratricopeptide repeat [PF14559.8, score=37.1]; Tetratricopeptide repeat [PF13371.8, score=33.0]; TPR repeat [PF13414.8, score=29.8]; Tetratricopeptide repeat [PF13428.8, score=25.7]; Tetratricopeptide repeat [PF13432.8, score=19.9]} {Human: ENSG00000136319, TTC5, tetratricopeptide repeat domain 5, [RH, Score=267, Expect=1e-84]} {Mouse: ENSMUSG00000006288, Ttc5, tetratricopeptide repeat domain 5, [RH, Score=268, Expect=5e-85]} {Smed: dd_Smed_v6_2772_0_1, dd_Smed_v6_2772_0_1, [RH, Score=254, Expect=2e-79]} {RNA1509_10849, RNA1509_45056, RNA1509_59967} {RNA1310_9696.1, RNA1509_10849, RNA1509_45056, RNA1509_59967} {RNA1509_10849, RNA1509_45056, RNA1509_59967, RNA815_3371}
2. MligTC455_20456 969 20.18 Mlig455_009820

Neo: -

Age: logFC(26M/2M)=-0.309

Region-enriched R4: 2.126/0.01785

CCDC170 1.77 - - - 0.820 0.950 - Mlig455_009820 {REF} {Length: 4514} {Human: ENSG00000120262, CCDC170, coiled-coil domain containing 170, [Score=186, Expect=6e-49]} {Mouse: ENSMUSG00000019767, Ccdc170, coiled-coil domain containing 170, [Score=194, Expect=7e-52]} {Dmel: FBgn0263079, CG43338, [Score=110, Expect=2e-24]} {Smed: dd_Smed_v6_7992_0_1, dd_Smed_v6_7992_0_1, [RH, Score=311, Expect=1e-93]} {RNA1509_4390, RNA1509_44137} {RNA1310_11987, RNA1509_44137} {RNA1509_44137, RNA815_3101}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA