TomoSeq data search

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Results for MligTC455_30464

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30464	19	0.39	Mlig455_003514	Neo: - Age: -	RORB	Mlig455_003514 {REF} {Length: 3794} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=109.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=35.2]} {Human: ENSG00000198963, RORB, RAR related orphan receptor B, [RH, Score=167, Expect=7e-46]} {Mouse: ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [RH, Score=171, Expect=2e-47]} {Dmel: FBgn0000448, Hr3, Hormone receptor 3, [RH, Score=178, Expect=4e-50]} {Celegans: WBGene00004786, sex-1, Steroid hormone receptor family member cnr14, [RH, Score=136, Expect=2e-34]} {Smed: dd_Smed_v6_32297_0_1, dd_Smed_v6_32297_0_1, [Score=110, Expect=4e-27]} {RNA1509_51319} {RNA1310_4731} {RNA815_13419}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30464

0.39

Mlig455_003514

Neo: -

Age: -

RORB

Mlig455_003514 {REF} {Length: 3794} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=109.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=35.2]} {Human: ENSG00000198963, RORB, RAR related orphan receptor B, [RH, Score=167, Expect=7e-46]} {Mouse: ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [RH, Score=171, Expect=2e-47]} {Dmel: FBgn0000448, Hr3, Hormone receptor 3, [RH, Score=178, Expect=4e-50]} {Celegans: WBGene00004786, sex-1, Steroid hormone receptor family member cnr14, [RH, Score=136, Expect=2e-34]} {Smed: dd_Smed_v6_32297_0_1, dd_Smed_v6_32297_0_1, [Score=110, Expect=4e-27]} {RNA1509_51319} {RNA1310_4731} {RNA815_13419}

Cumulative graph for MligTC455_30464

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_30464

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30464	19	0.39	Mlig455_003514	Neo: - Age: -	RORB	1	-	-	-	-	-	1.000	Mlig455_003514 {REF} {Length: 3794} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=109.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=35.2]} {Human: ENSG00000198963, RORB, RAR related orphan receptor B, [RH, Score=167, Expect=7e-46]} {Mouse: ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [RH, Score=171, Expect=2e-47]} {Dmel: FBgn0000448, Hr3, Hormone receptor 3, [RH, Score=178, Expect=4e-50]} {Celegans: WBGene00004786, sex-1, Steroid hormone receptor family member cnr14, [RH, Score=136, Expect=2e-34]} {Smed: dd_Smed_v6_32297_0_1, dd_Smed_v6_32297_0_1, [Score=110, Expect=4e-27]} {RNA1509_51319} {RNA1310_4731} {RNA815_13419}
2.	MligTC455_35091	135	2.82	Mlig455_063859	Neo: Irradiation Age: Up-Up-Down, logFC(26M/2M)=0.775 Region-specific R5: 5.112 Region-enriched R5: 4.559/0.00000 Region-enriched R2: 4.171/0.04774	ARHGAP19-SLIT1	0.98	-	-	-	-	-	0.980	Mlig455_063859 {REF} {Length: 5232} {Pfam: RhoGAP domain [PF00620.29, score=57.8]} {Human: ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=89.4, Expect=2e-18]; ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=89.0, Expect=3e-18]} {Mouse: ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=90.1, Expect=9e-19]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=63.5, Expect=3e-10]} {Smed: dd_Smed_v6_4332_0_1, dd_Smed_v6_4332_0_1, [Score=49.7, Expect=4e-06]} {RNA1509_40728} {RNA1310_12971.1} {RNA815_13440}
3.	MligTC455_34516	21	0.44	Mlig455_038819	Neo: - Age: -		0.972	-	-	-	-	-	0.972	Mlig455_038819 {REF} {Length: 1422} {NoTransDecoderORF} {RNA1310_38105} {RNA815_46198}
4.	MligTC455_24973	42	0.88	Mlig455_065756	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_065756 {REF} {Length: 759} {RNA1509_29619} {RNA1310_124411} {RNA815_54604}
5.	MligTC455_48963	78	1.63	Mlig455_037799	Neo: - Age: - Region-enriched R5: 2.276/0.03192		0.963	-	-	-	-	-	0.963	Mlig455_037799 {REF} {Length: 3127} {TRANSSPLICED} {RNA1310_29529.1} {RNA815_43682}
6.	MligTC455_13807	36	0.75	Mlig455_038628	Neo: - Age: Down-Down-Up		0.955	-	-	-	-	-	0.955	Mlig455_038628 {REF} {Length: 4304} {RNA1509_41798} {RNA1310_24413} {RNA815_8731.1}
7.	MligTC455_01582	43	0.89	Mlig455_046055	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_046055 {REF} {Length: 504} {NoTransDecoderORF} {RNA1509_284} {RNA1310_24413} {RNA815_6153}
8.	MligTC455_00059	35	0.73	Mlig455_071038	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_071038 {REF} {Length: 828} {NoTransDecoderORF} {RNA1509_284} {RNA1310_24413} {RNA815_6153}