TomoSeq data search

Data search

Results for MligTC455_30531

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30531

56883

1185.06

Mlig455_016601

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.579

DYNLL1

Mlig455_016601 {REF} {Length: 1238} {Pfam: Dynein light chain type 1 [PF01221.20, score=62.8]; EF-hand domain pair [PF13499.8, score=21.2]; EF hand [PF00036.34, score=19.7]; EF-hand domain [PF14658.8, score=19.7]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=48.9, Expect=1e-07]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=48.9, Expect=7e-08]} {Dmel: FBgn0011760, ctp, cut up, [Score=47.0, Expect=3e-07]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=45.1, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=118, Expect=4e-34]} {RNA1509_344, RNA1509_38667} {RNA1310_2699, RNA1509_38667} {RNA1509_38667, RNA815_17450}

Cumulative graph for MligTC455_30531

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.773	10.217	0.03061	0.44752
RegionR2	-0.441	10.217	0.16837	0.51345
RegionR3	-0.071	10.217	0.80536	1.00000
RegionR4	0.264	10.217	0.40038	0.72678
RegionR5	-0.371	10.217	0.19982	0.49005
RegionR6	0.197	10.217	0.47995	1.00000
RegionR7	0.598	10.217	0.02387	0.28897
RegionR8	0.597	10.217	0.03044	0.34077

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.176	10.217	0.66898	1.00000
RegenerationR2	-0.506	10.217	0.17660	0.61729
RegenerationR3	-0.758	10.217	0.04276	0.36178
RegenerationR4	-0.917	10.217	0.01685	0.20334
RegenerationR5	-0.57	10.217	0.12563	0.52913
RegenerationR6	-0.649	10.217	0.08014	0.35354
RegenerationBL	-0.112	10.217	0.71730	1.00000
RegenerationTP	-0.419	10.217	0.21466	0.65743

Genes with expression patterns similar to MligTC455_30531

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30531	56883	1185.06	Mlig455_016601	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.579	DYNLL1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016601 {REF} {Length: 1238} {Pfam: Dynein light chain type 1 [PF01221.20, score=62.8]; EF-hand domain pair [PF13499.8, score=21.2]; EF hand [PF00036.34, score=19.7]; EF-hand domain [PF14658.8, score=19.7]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=48.9, Expect=1e-07]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=48.9, Expect=7e-08]} {Dmel: FBgn0011760, ctp, cut up, [Score=47.0, Expect=3e-07]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=45.1, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=118, Expect=4e-34]} {RNA1509_344, RNA1509_38667} {RNA1310_2699, RNA1509_38667} {RNA1509_38667, RNA815_17450}
2.	MligTC455_30532	56443	1175.89	Mlig455_016544	Neo: - Age: Down-Down-Up, logFC(26M/2M)=4.386	DYNLL1	5.994	1.000	1.000	0.998	0.998	0.998	1.000	Mlig455_016544 {REF} {Length: 2613} {Pfam: Dynein light chain type 1 [PF01221.20, score=62.8]; EF-hand domain pair [PF13499.8, score=21.2]; EF hand [PF00036.34, score=19.7]; EF-hand domain [PF14658.8, score=19.7]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=48.9, Expect=1e-07]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=48.9, Expect=7e-08]} {Dmel: FBgn0011760, ctp, cut up, [Score=47.0, Expect=3e-07]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=45.1, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=118, Expect=4e-34]} {RNA1509_344, RNA1509_6130} {RNA1310_2699, RNA1509_6130} {RNA1509_6130, RNA815_17450}
3.	MligTC455_30530	58508	1218.91	Mlig455_009008	Neo: - Age: logFC(26M/2M)=-0.294	DYNLL1	5.984	0.997	0.998	0.998	0.996	0.995	1.000	Mlig455_009008 {REF} {Length: 1131} {Pfam: Dynein light chain type 1 [PF01221.20, score=62.8]; EF-hand domain pair [PF13499.8, score=21.2]; EF hand [PF00036.34, score=19.7]; EF-hand domain [PF14658.8, score=19.7]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=48.9, Expect=1e-07]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=48.9, Expect=7e-08]} {Dmel: FBgn0011760, ctp, cut up, [Score=47.0, Expect=3e-07]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=45.1, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=118, Expect=4e-34]} {RNA1509_344, RNA1509_65} {RNA1310_2699, RNA1509_344, RNA1509_65} {RNA1509_344, RNA1509_65, RNA815_17450}
4.	MligTC455_27944	82649	1721.85	Mlig455_067360	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.202		5.01	0.829	0.733	0.779	0.794	0.886	0.989	Mlig455_067360 {REF} {Length: 1112} {RNA1509_12399, RNA1509_12758, RNA1509_135, RNA1509_14617, RNA1509_40, RNA1509_5391, RNA1509_56639, RNA1509_6229, RNA1509_9468} {RNA1310_50006.1, RNA1509_12399, RNA1509_12758, RNA1509_135, RNA1509_14617, RNA1509_40, RNA1509_5391, RNA1509_56639, RNA1509_6229, RNA1509_9468} {RNA1509_12399, RNA1509_12758, RNA1509_135, RNA1509_14617, RNA1509_40, RNA1509_5391, RNA1509_56639, RNA1509_6229, RNA1509_9468, RNA815_18818.1}
5.	MligTC455_27943	82204	1712.59	Mlig455_063231	Neo: - Age: logFC(26M/2M)=-0.903		5.005	0.829	0.731	0.776	0.816	0.863	0.990	Mlig455_063231 {REF} {Length: 978} {RNA1509_5391} {RNA1310_50006.1} {RNA815_18818.1}
6.	MligTC455_27941	75529	1573.52	Mlig455_045960	Neo: - Age: logFC(26M/2M)=-1.009		4.988	0.825	0.766	0.763	0.814	0.826	0.994	Mlig455_045960 {REF} {Length: 705} {RNA1509_6876} {RNA1310_53541} {RNA815_18911.1}
7.	MligTC455_27940	75506	1573.05	Mlig455_045909	Neo: - Age: Down-Up-Down		4.987	0.826	0.766	0.762	0.813	0.826	0.994	Mlig455_045909 {REF} {Length: 937} {RNA1509_22026} {RNA1310_53541} {RNA815_18911.1}
8.	MligTC455_27942	82849	1726.02	Mlig455_062028	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.714		4.987	0.825	0.729	0.775	0.804	0.864	0.990	Mlig455_062028 {REF} {Length: 2411} {RNA1509_5391} {RNA1310_50006.1} {RNA815_18818.1}
9.	MligTC455_30608	38765	807.61	Mlig455_053751	Neo: - Age: logFC(26M/2M)=-0.240	DYNLL1	4.259	-	0.913	0.796	0.809	0.789	0.952	Mlig455_053751 {REF} {Length: 1642} {Pfam: Dynein light chain type 1 [PF01221.20, score=80.2]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=77.4, Expect=7e-20]; ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=74.3, Expect=1e-18]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=77.4, Expect=5e-20]; ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=74.3, Expect=8e-19]} {Dmel: FBgn0011760, ctp, cut up, [Score=75.9, Expect=1e-19]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=74.3, Expect=4e-19]} {Smed: dd_Smed_v6_10084_0_5, dd_Smed_v6_10084_0_5, [Score=75.5, Expect=9e-20]} {RNA1509_22401, RNA1509_4157, RNA1509_6984} {RNA1310_21306, RNA1509_22401, RNA1509_4157, RNA1509_6984} {RNA1509_22401, RNA1509_4157, RNA1509_6984, RNA815_24788}
10.	Mlig999013.1						2.562	-	-	-	0.764	0.837	0.961
11.	MligTC455_39343	60294	1256.12	Mlig455_023449	Neo: - Age: Down-Up-Up, logFC(26M/2M)=-0.270 Regeneration-upregulated BL: 1.536 Regeneration-enriched BL: 1.536		2.484	0.757	-	-	0.773	-	0.954	Mlig455_023449 {REF} {Length: 1053} {RNA1509_18953, RNA1509_461, RNA1509_573, RNA1509_6089, RNA1509_97} {RNA1310_57788.1, RNA1509_18953, RNA1509_461, RNA1509_573, RNA1509_6089} {RNA1509_18953, RNA1509_461, RNA1509_573, RNA1509_6089, RNA815_17220.2}
12.	MligTC455_39342	60379	1257.89	Mlig455_023423	Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 1.537 Regeneration-enriched BL: 1.537		2.48	0.757	-	-	0.769	-	0.954	Mlig455_023423 {REF} {Length: 983} {RNA1509_97} {RNA1310_57788.1, RNA1509_97} {RNA1509_97, RNA815_17220.2}
13.	Mlig999027.1						1.786	-	-	-	0.816	-	0.970
14.	MligTC455_07421	19136	398.66	Mlig455_029662	Neo: - Age: Down-Up-Up Region-specific R8: 3.646 Region-enriched R8: 3.196/0.00000 Region-enriched R7: 1.280/0.00593	SLC25A24	1.756	-	-	-	0.965	0.791	-	Mlig455_029662 {REF} {Length: 528} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=52.9]; EF hand [PF13202.8, score=51.2]; EF-hand domain pair [PF13499.8, score=51.0]; EF-hand domain [PF13405.8, score=41.8]; EF-hand domain pair [PF13833.8, score=41.6]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.1]; Family of unknown function (DUF5766) [PF19070.2, score=19.0]} {Human: ENSG00000085491, SLC25A24, solute carrier family 25 member 24, [Score=48.9, Expect=5e-08]; ENSG00000284468, SLC25A24, solute carrier family 25 member 24, [Score=48.9, Expect=5e-08]; ENSG00000114854, TNNC1, troponin C1, slow skeletal and cardiac type, [Score=48.1, Expect=6e-08]} {Mouse: ENSMUSG00000091898, Tnnc1, troponin C, cardiac/slow skeletal, [Score=48.5, Expect=3e-08]; ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [Score=46.2, Expect=4e-07]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [Score=47.0, Expect=1e-07]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [Score=45.4, Expect=3e-07]} {RNA1509_10992, RNA1509_2519, RNA1509_679} {RNA1310_66965, RNA1509_10992, RNA1509_2519, RNA1509_679} {RNA1509_10992, RNA1509_2519, RNA1509_679, RNA815_31569.1}
15.	MligTC455_51213	36024	750.49	Mlig455_002629	Neo: - Age: Up-Down-Up, logFC(26M/2M)=-0.365 Regeneration-enriched R1: 3.440 Regeneration-enriched BL: 3.326 Regeneration-enriched R6: 2.523 Regeneration-enriched R5: 2.440 Regeneration-enriched R2: 2.439 Regeneration-enriched TP: 2.412		0.971	-	-	-	-	-	0.971	Mlig455_002629 {REF} {Length: 2031} {Pfam: Dynein light chain type 1 [PF01221.20, score=50.1]; EF-hand domain pair [PF13499.8, score=32.3]; EF hand [PF00036.34, score=31.9]; EF-hand domain [PF13405.8, score=27.5]; EF-hand domain pair [PF13833.8, score=25.9]} {Smed: dd_Smed_v6_1881_0_1, dd_Smed_v6_1881_0_1, [Score=95.1, Expect=5e-25]} {RNA1509_3609, RNA1509_3840} {RNA1310_42849, RNA1509_3609, RNA1509_3840} {RNA1509_3609, RNA1509_3840, RNA815_10126}

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