TomoSeq data search

Data search

Results for MligTC455_30558

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30558	12	0.25	Mlig455_052099	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.375	TRPM3	Mlig455_052099 {REF} {Length: 6224} {Pfam: GWT1 [PF06423.14, score=77.5]; Ankyrin repeats (3 copies) [PF12796.9, score=68.7]; Ankyrin repeats (many copies) [PF13637.8, score=59.2]; Ankyrin repeat [PF13606.8, score=39.1]; Ankyrin repeats (many copies) [PF13857.8, score=30.2]; Ankyrin repeat [PF00023.32, score=22.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=68.9, Expect=9e-11]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=68.2, Expect=2e-10]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=68.2, Expect=2e-10]; ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=65.9, Expect=4e-10]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=65.9, Expect=4e-10]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=71.6, Expect=5e-12]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=70.5, Expect=2e-11]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=69.3, Expect=5e-11]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=83.6, Expect=5e-16]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=91.3, Expect=2e-18]} {Smed: dd_Smed_v6_11259_0_4, dd_Smed_v6_11259_0_4, [Score=89.4, Expect=1e-17]} {RNA1509_28166} {RNA1310_12190} {RNA815_4044}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30558

0.25

Mlig455_052099

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.375

TRPM3

Mlig455_052099 {REF} {Length: 6224} {Pfam: GWT1 [PF06423.14, score=77.5]; Ankyrin repeats (3 copies) [PF12796.9, score=68.7]; Ankyrin repeats (many copies) [PF13637.8, score=59.2]; Ankyrin repeat [PF13606.8, score=39.1]; Ankyrin repeats (many copies) [PF13857.8, score=30.2]; Ankyrin repeat [PF00023.32, score=22.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=68.9, Expect=9e-11]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=68.2, Expect=2e-10]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=68.2, Expect=2e-10]; ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=65.9, Expect=4e-10]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=65.9, Expect=4e-10]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=71.6, Expect=5e-12]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=70.5, Expect=2e-11]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=69.3, Expect=5e-11]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=83.6, Expect=5e-16]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=91.3, Expect=2e-18]} {Smed: dd_Smed_v6_11259_0_4, dd_Smed_v6_11259_0_4, [Score=89.4, Expect=1e-17]} {RNA1509_28166} {RNA1310_12190} {RNA815_4044}

Cumulative graph for MligTC455_30558

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_30558

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30558	12	0.25	Mlig455_052099	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.375	TRPM3	1	-	-	-	-	1.000	-	Mlig455_052099 {REF} {Length: 6224} {Pfam: GWT1 [PF06423.14, score=77.5]; Ankyrin repeats (3 copies) [PF12796.9, score=68.7]; Ankyrin repeats (many copies) [PF13637.8, score=59.2]; Ankyrin repeat [PF13606.8, score=39.1]; Ankyrin repeats (many copies) [PF13857.8, score=30.2]; Ankyrin repeat [PF00023.32, score=22.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=68.9, Expect=9e-11]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=68.2, Expect=2e-10]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=68.2, Expect=2e-10]; ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=65.9, Expect=4e-10]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=65.9, Expect=4e-10]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=71.6, Expect=5e-12]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=70.5, Expect=2e-11]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=69.3, Expect=5e-11]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=83.6, Expect=5e-16]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=91.3, Expect=2e-18]} {Smed: dd_Smed_v6_11259_0_4, dd_Smed_v6_11259_0_4, [Score=89.4, Expect=1e-17]} {RNA1509_28166} {RNA1310_12190} {RNA815_4044}
2.	MligTC455_01664	15	0.32	Mlig455_052581	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_052581 {REF} {Length: 878} {NoTransDecoderORF} {RNA1310_98700}
3.	MligTC455_51655	303	6.31	Mlig455_015084, Mlig455_015200, Mlig455_027162	Neo: - Age: Up-Up-Up, logFC(26M/2M)=3.423		0.967	-	-	-	-	0.967	-	Mlig455_015084 {REF} {Length: 746} {TRANSSPLICED} {RNA1310_65067} {RNA815_34678} Mlig455_015200 {REF} {Length: 788} {TRANSSPLICED} {RNA1310_65067} {RNA815_34678} Mlig455_027162 {REF} {Length: 788} {TRANSSPLICED} {RNA1310_65067} {RNA815_34678}
4.	MligTC455_16355	655	13.66	Mlig455_041456, Mlig455_041501	Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.263 Region-specific R4: 6.567		0.962	-	-	-	-	0.962	-	Mlig455_041456 {REF} {Length: 1804} {RNA1509_16681, RNA1509_8649} {RNA1310_29365, RNA1509_16681} {RNA1509_16681, RNA815_14507.1} Mlig455_041501 {REF} {Length: 1895} {RNA1509_8649} {RNA1310_29365} {RNA815_14507.1}
5.	MligTC455_09930	62	1.28	Mlig455_007950, Mlig455_008051	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_007950 {REF} {Length: 561} {NoTransDecoderORF} {RNA1310_28876.2} {RNA815_33150} Mlig455_008051 {REF} {Length: 1404} {RNA1509_11045} {RNA1310_28876.2} {RNA815_37437}
6.	MligTC455_55993	15	0.32	Mlig455_028096	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_028096 {REF} {Length: 20} {TRANSSPLICED} {NoTransDecoderORF}
7.	MligTC455_11479	25	0.52	Mlig455_038924	Neo: - Age: - Regeneration-enriched R3: 7.663 Regeneration-enriched R4: 7.225	AVP	0.95	-	-	-	-	0.950	-	Mlig455_038924 {REF} {Length: 1513} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=54.9]} {Human: ENSG00000101200, AVP, arginine vasopressin, [Score=43.5, Expect=7e-06]} {Mouse: ENSMUSG00000037727, Avp, arginine vasopressin, [Score=45.4, Expect=1e-06]} {RNA1509_55830} {RNA1310_49297} {RNA815_9217}
8.	MligTC455_25728	126	2.62	Mlig455_033609, Mlig455_050117	Neo: - Age: logFC(26M/2M)=1.218		0.95	-	-	-	-	0.950	-	Mlig455_033609 {REF} {Length: 1672} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=84.6]; HSP20-like domain found in ArsA [PF17886.3, score=27.8]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.4, Expect=1e-09]} {Smed: dd_Smed_v6_5406_0_1, dd_Smed_v6_5406_0_1, [RH, Score=110, Expect=9e-29]} {RNA1509_26837} {RNA1310_32639} {RNA815_36629} Mlig455_050117 {REF} {Length: 1185} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=84.6]; HSP20-like domain found in ArsA [PF17886.3, score=27.8]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=57.4, Expect=1e-09]} {Smed: dd_Smed_v6_5406_0_1, dd_Smed_v6_5406_0_1, [RH, Score=110, Expect=9e-29]} {RNA1509_26837} {RNA1310_32639, RNA1509_26837} {RNA1509_26837, RNA815_36629}