TomoSeq data search

Data search

Results for MligTC455_30607

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30607

18257

380.36

Mlig455_017709

Neo: -

Age: logFC(26M/2M)=0.768

DYNLL1

Mlig455_017709 {REF} {Length: 829} {Pfam: Dynein light chain type 1 [PF01221.20, score=79.7]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=79.0, Expect=2e-19]; ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=75.9, Expect=3e-18]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=79.0, Expect=2e-19]; ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=75.9, Expect=2e-18]} {Dmel: FBgn0011760, ctp, cut up, [Score=77.4, Expect=4e-19]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=75.9, Expect=1e-18]} {Smed: dd_Smed_v6_10084_0_5, dd_Smed_v6_10084_0_5, [Score=77.4, Expect=2e-19]} {RNA1509_2029} {RNA1310_21306} {RNA815_24788}

Cumulative graph for MligTC455_30607

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.801	8.604	0.03291	0.45941
RegionR2	0.304	8.604	0.28275	0.66928
RegionR3	0.387	8.604	0.11773	0.59430
RegionR4	0.127	8.604	0.65052	0.95333
RegionR5	-0.379	8.604	0.13567	0.37689
RegionR6	0.19	8.604	0.44085	1.00000
RegionR7	0.211	8.604	0.39040	1.00000
RegionR8	-0.039	8.604	0.88191	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.071	8.604	0.87848	1.00000
RegenerationR2	-0.359	8.604	0.26118	0.70780
RegenerationR3	-0.257	8.604	0.42882	0.82053
RegenerationR4	0.028	8.604	0.93397	1.00000
RegenerationR5	0.298	8.604	0.36241	0.77362
RegenerationR6	-0.484	8.604	0.13767	0.45528
RegenerationBL	0.196	8.604	0.47661	0.84239
RegenerationTP	0.075	8.604	0.80364	1.00000

Genes with expression patterns similar to MligTC455_30607

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30607	18257	380.36	Mlig455_017709	Neo: - Age: logFC(26M/2M)=0.768	DYNLL1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017709 {REF} {Length: 829} {Pfam: Dynein light chain type 1 [PF01221.20, score=79.7]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=79.0, Expect=2e-19]; ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=75.9, Expect=3e-18]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=79.0, Expect=2e-19]; ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=75.9, Expect=2e-18]} {Dmel: FBgn0011760, ctp, cut up, [Score=77.4, Expect=4e-19]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=75.9, Expect=1e-18]} {Smed: dd_Smed_v6_10084_0_5, dd_Smed_v6_10084_0_5, [Score=77.4, Expect=2e-19]} {RNA1509_2029} {RNA1310_21306} {RNA815_24788}
2.	MligTC455_30609	14296	297.84	Mlig455_017761	Neo: - Age: Down-Up-Down, logFC(26M/2M)=1.080		5.726	0.976	0.979	0.952	0.951	0.924	0.944	Mlig455_017761 {REF} {Length: 707} {Pfam: Dynein light chain type 1 [PF01221.20, score=23.5]} {RNA1509_663} {RNA1310_21306, RNA1509_663} {RNA1509_663, RNA815_24788}
3.	MligTC455_30608	38765	807.61	Mlig455_053751	Neo: - Age: logFC(26M/2M)=-0.240	DYNLL1	5.29	0.953	0.953	0.738	0.941	0.756	0.949	Mlig455_053751 {REF} {Length: 1642} {Pfam: Dynein light chain type 1 [PF01221.20, score=80.2]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=77.4, Expect=7e-20]; ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=74.3, Expect=1e-18]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=77.4, Expect=5e-20]; ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=74.3, Expect=8e-19]} {Dmel: FBgn0011760, ctp, cut up, [Score=75.9, Expect=1e-19]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=74.3, Expect=4e-19]} {Smed: dd_Smed_v6_10084_0_5, dd_Smed_v6_10084_0_5, [Score=75.5, Expect=9e-20]} {RNA1509_22401, RNA1509_4157, RNA1509_6984} {RNA1310_21306, RNA1509_22401, RNA1509_4157, RNA1509_6984} {RNA1509_22401, RNA1509_4157, RNA1509_6984, RNA815_24788}
4.	MligTC455_03039	10327	215.14	Mlig455_066095	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.128 Regeneration-enriched TP: 2.903 Regeneration-enriched R5: 2.131 Regeneration-enriched R2: 2.029 Regeneration-enriched R4: 2.007 Regeneration-enriched R3: 1.692	CYP2J2	0.953	-	-	0.953	-	-	-	Mlig455_066095 {REF} {Length: 2491} {Pfam: Cytochrome P450 [PF00067.24, score=315.3]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=246, Expect=4e-75]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=239, Expect=2e-72]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=234, Expect=1e-70]} {Mouse: ENSMUSG00000060407, Cyp2a12, cytochrome P450, family 2, subfamily a, polypeptide 12, [RH, Score=258, Expect=4e-80]; ENSMUSG00000091867, Cyp2a22, cytochrome P450, family 2, subfamily a, polypeptide 22, [RH, Score=248, Expect=3e-76]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=190, Expect=5e-54]} {Celegans: WBGene00018261, cyp-33C5, CYtochrome P450 family, [Score=213, Expect=8e-63]} {Smed: dd_Smed_v6_2351_0_1, dd_Smed_v6_2351_0_1, [Score=270, Expect=8e-85]} {RNA1509_3486, RNA1509_35776} {RNA1310_10619, RNA1509_3486, RNA1509_35776} {RNA1509_3486, RNA1509_35776, RNA815_3593}
5.	MligTC455_47966	2993	62.36	Mlig455_064676	Neo: - Age: logFC(26M/2M)=-0.223 Regeneration-upregulated BL: 1.199 Regeneration-enriched BL: 1.199	C17orf97	0.953	-	-	-	-	-	0.953	Mlig455_064676 {REF} {Length: 1836} {Pfam: ATP:guanido phosphotransferase, N-terminal domain [PF02807.17, score=21.5]} {Human: ENSG00000283985, C17orf97, chromosome 17 open reading frame 97, [Score=57.8, Expect=2e-08]; ENSG00000187624, C17orf97, chromosome 17 open reading frame 97, [Score=57.8, Expect=2e-08]} {RNA1509_22581, RNA1509_52369, RNA1509_8425} {RNA1310_16794, RNA1509_22581, RNA1509_52369, RNA1509_8425} {RNA1509_22581, RNA1509_52369, RNA1509_8425, RNA815_9653}

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