Data search
Results for MligTC455_30626
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_30626 | 1105 | 23.03 | Mlig455_057829 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.670/0.00000 |
SURF2 | Mlig455_057829 {REF} {Length: 1241} {Pfam: Surfeit locus protein 2 (SURF2) [PF05477.13, score=79.8]} {Human: ENSG00000281024, SURF2, surfeit 2, [RH, Score=63.2, Expect=3e-11]; ENSG00000148291, SURF2, surfeit 2, [RH, Score=63.2, Expect=3e-11]} {Mouse: ENSMUSG00000014873, Surf2, surfeit gene 2, [RH, Score=66.2, Expect=1e-12]} {Smed: dd_Smed_v6_4458_0_1, dd_Smed_v6_4458_0_1, [RH, Score=71.6, Expect=4e-15]} {RNA1509_13815, RNA1509_22158} {RNA1310_31608, RNA1509_13815, RNA1509_22158} {RNA1509_13815, RNA1509_22158, RNA815_14115} |
Cumulative graph for MligTC455_30626
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.19 | 4.812 | 0.07526 | 0.60655 | |
| RegionR2 | 0.105 | 4.812 | 0.81022 | 1.00000 | |
| RegionR3 | -0.098 | 4.812 | 0.80577 | 1.00000 | |
| RegionR4 | 0.662 | 4.812 | 0.09047 | 0.28758 | |
| RegionR5 | 1.67 | 4.812 | 0.00000 | 0.00000 | |
| RegionR6 | 0.369 | 4.812 | 0.31705 | 0.90483 | |
| RegionR7 | 0.646 | 4.812 | 0.14110 | 0.70213 | |
| RegionR8 | -1.165 | 4.812 | 0.10427 | 0.60326 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.852 | 4.812 | 0.24054 | 0.96582 | |
| RegenerationR2 | 0.321 | 4.812 | 0.34413 | 0.77802 | |
| RegenerationR3 | 0.597 | 4.812 | 0.11335 | 0.52709 | |
| RegenerationR4 | 0.34 | 4.812 | 0.34974 | 0.78028 | |
| RegenerationR5 | -0.113 | 4.812 | 0.71593 | 0.95811 | |
| RegenerationR6 | 1.111 | 4.812 | 0.00164 | 0.04501 | |
| RegenerationBL | 1.288 | 4.812 | 0.00173 | 0.03280 | |
| RegenerationTP | 0.409 | 4.812 | 0.44752 | 0.86564 |
Genes with expression patterns similar to MligTC455_30626
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_30626 | 1105 | 23.03 | Mlig455_057829 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.670/0.00000 |
SURF2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_057829 {REF} {Length: 1241} {Pfam: Surfeit locus protein 2 (SURF2) [PF05477.13, score=79.8]} {Human: ENSG00000281024, SURF2, surfeit 2, [RH, Score=63.2, Expect=3e-11]; ENSG00000148291, SURF2, surfeit 2, [RH, Score=63.2, Expect=3e-11]} {Mouse: ENSMUSG00000014873, Surf2, surfeit gene 2, [RH, Score=66.2, Expect=1e-12]} {Smed: dd_Smed_v6_4458_0_1, dd_Smed_v6_4458_0_1, [RH, Score=71.6, Expect=4e-15]} {RNA1509_13815, RNA1509_22158} {RNA1310_31608, RNA1509_13815, RNA1509_22158} {RNA1509_13815, RNA1509_22158, RNA815_14115} |
| 2. | MligTC455_39646 | 934 | 19.46 | Mlig455_021914 | Neo: Neoblast, stringent |
SF3A3 | 1.693 | - | - | - | 0.739 | - | 0.954 | Mlig455_021914 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: SF3a60/Prp9 C-terminal [PF11931.10, score=144.3]} {Human: ENSG00000183431, SF3A3, splicing factor 3a subunit 3, [Score=243, Expect=9e-77]} {Mouse: ENSMUSG00000028902, Sf3a3, splicing factor 3a, subunit 3, [Score=243, Expect=3e-77]} {Dmel: FBgn0014366, noi, noisette, [Score=253, Expect=9e-81]} {Celegans: WBGene00011758, T13H5.4, [Score=206, Expect=3e-63]} {Smed: dd_Smed_v6_2653_0_1, dd_Smed_v6_2653_0_1, [Score=207, Expect=3e-63]} {RNA1509_27195} {RNA1310_12410} {RNA815_13038} |
| 3. | MligTC455_39647 | 1875 | 39.07 | Mlig455_021993, Mlig455_022046 | Neo: - Age: logFC(26M/2M)=0.652 |
SF3A3 | 1.689 | - | - | - | 0.736 | - | 0.953 | Mlig455_021993 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: SF3a60/Prp9 C-terminal [PF11931.10, score=183.7]; Replication stress response SDE2 C-terminal [PF13297.8, score=96.5]; Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 [PF16837.7, score=60.7]; Splicing factor SF3a60 binding domain [PF12108.10, score=28.6]} {Human: ENSG00000183431, SF3A3, splicing factor 3a subunit 3, [RH, Score=629, Expect=0.0]} {Mouse: ENSMUSG00000028902, Sf3a3, splicing factor 3a, subunit 3, [RH, Score=628, Expect=0.0]} {Dmel: FBgn0014366, noi, noisette, [RH, Score=609, Expect=0.0]} {Celegans: WBGene00011758, T13H5.4, [RH, Score=524, Expect=0.0]} {Smed: dd_Smed_v6_2653_0_1, dd_Smed_v6_2653_0_1, [RH, Score=551, Expect=0.0]} {RNA1509_27195} {RNA1310_12410} {RNA815_13038} Mlig455_022046 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: SF3a60/Prp9 C-terminal [PF11931.10, score=183.7]; Replication stress response SDE2 C-terminal [PF13297.8, score=96.5]; Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 [PF16837.7, score=60.7]; Splicing factor SF3a60 binding domain [PF12108.10, score=28.6]} {Human: ENSG00000183431, SF3A3, splicing factor 3a subunit 3, [RH, Score=629, Expect=0.0]} {Mouse: ENSMUSG00000028902, Sf3a3, splicing factor 3a, subunit 3, [RH, Score=628, Expect=0.0]} {Dmel: FBgn0014366, noi, noisette, [RH, Score=609, Expect=0.0]} {Celegans: WBGene00011758, T13H5.4, [RH, Score=524, Expect=0.0]} {Smed: dd_Smed_v6_2653_0_1, dd_Smed_v6_2653_0_1, [RH, Score=551, Expect=0.0]} {RNA1509_26009, RNA1509_27195, RNA1509_35084, RNA1509_58691, RNA1509_9315} {RNA1310_12410, RNA1509_26009, RNA1509_27195, RNA1509_35084, RNA1509_58691, RNA1509_9315} {RNA1509_26009, RNA1509_27195, RNA1509_35084, RNA1509_58691, RNA1509_9315, RNA815_13038} |
| 4. | MligTC455_33269 | 864 | 18 | Mlig455_031609 | Neo: - Age: - Region-specific R4: 2.043 Region-enriched R4: 1.624/0.00001 |
TMEM161B | 0.976 | - | - | - | - | - | 0.976 | Mlig455_031609 {REF} {Length: 3778} {TRANSSPLICED} {Pfam: Predicted transmembrane protein 161AB [PF10268.11, score=309.8]} {Human: ENSG00000164180, TMEM161B, transmembrane protein 161B, [RH, Score=191, Expect=9e-55]} {Mouse: ENSMUSG00000035762, Tmem161b, transmembrane protein 161B, [RH, Score=208, Expect=3e-61]} {Dmel: FBgn0036133, CG7638, [RH, Score=184, Expect=2e-52]} {Celegans: WBGene00013601, Y87G2A.13, [RH, Score=65.5, Expect=3e-11]} {Smed: dd_Smed_v6_9540_0_1, dd_Smed_v6_9540_0_1, [RH, Score=218, Expect=1e-65]} {RNA1509_12155} {RNA1310_14152.1, RNA1509_12155} {RNA1509_12155, RNA815_5969} |
| 5. | MligTC455_39702 | 1293 | 26.94 | Mlig455_010974 | Neo: - Age: - |
TMEM143 | 0.976 | - | - | - | 0.976 | - | - | Mlig455_010974 {REF} {Length: 2549} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3754) [PF12576.10, score=33.3]} {Human: ENSG00000161558, TMEM143, transmembrane protein 143, [RH, Score=119, Expect=2e-28]} {Mouse: ENSMUSG00000002781, Tmem143, transmembrane protein 143, [RH, Score=108, Expect=6e-25]} {Smed: dd_Smed_v6_3158_0_1, dd_Smed_v6_3158_0_1, [RH, Score=134, Expect=3e-34]} {RNA1509_26092, RNA1509_59521, RNA1509_9391} {RNA1310_8676.1, RNA1509_26092, RNA1509_59521} {RNA1509_26092, RNA1509_59521, RNA815_6851} |
| 6. | MligTC455_33023 | 431 | 8.97 | Mlig455_052682 | Neo: - Age: - |
RSU1 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_052682 {REF} {Length: 1870} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=67.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.3]; Leucine Rich Repeat [PF00560.35, score=26.6]} {Human: ENSG00000148484, RSU1, Ras suppressor protein 1, [Score=245, Expect=2e-80]} {Mouse: ENSMUSG00000026727, Rsu1, Ras suppressor protein 1, [Score=241, Expect=3e-79]} {Dmel: FBgn0028546, ics, icarus, [Score=226, Expect=3e-73]} {Celegans: WBGene00007924, rsu-1, Ras SUppressor homolog, [Score=221, Expect=1e-71]} {Smed: dd_Smed_v6_2259_0_1, dd_Smed_v6_2259_0_1, [Score=243, Expect=2e-80]} {RNA1509_24872, RNA1509_31492, RNA1509_48073} {RNA1310_35307, RNA1509_24872, RNA1509_31492, RNA1509_48073} {RNA1509_24872, RNA1509_31492, RNA1509_48073, RNA815_12788.1} |
Berezikov Lab - 2020-2021 © ERIBA