Data search
Results for MligTC455_30655
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_30655 | 16 | 0.33 | Mlig455_010998 | Neo: - Age: - |
NYNRIN | Mlig455_010998 {REF} {Length: 2999} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=125.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=120.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.7]; Integrase zinc binding domain [PF17921.3, score=66.7]; Integrase core domain [PF00665.28, score=30.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=5e-14]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=352, Expect=5e-107]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} |
Cumulative graph for MligTC455_30655
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_30655
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_30655 | 16 | 0.33 | Mlig455_010998 | Neo: - Age: - |
NYNRIN | 1 | - | - | 1.000 | - | - | - | Mlig455_010998 {REF} {Length: 2999} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=125.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=120.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=71.7]; Integrase zinc binding domain [PF17921.3, score=66.7]; Integrase core domain [PF00665.28, score=30.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=5e-14]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=352, Expect=5e-107]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} |
| 2. | MligTC455_06948 | 11 | 0.23 | Mlig455_043252 | Neo: - Age: - |
0.976 | - | - | 0.976 | - | - | - | Mlig455_043252 {REF} {Length: 734} {TRANSSPLICED} {RNA1509_49118} {RNA1310_24738.1} {RNA815_3785.1} | |
| 3. | MligTC455_41835 | 128 | 2.68 | Mlig455_069829 | Neo: - Age: logFC(26M/2M)=-0.439 Region-enriched R2: 5.561/0.00354 |
CC2D2A | 0.957 | - | - | 0.957 | - | - | - | Mlig455_069829 {REF} {Length: 6012} {TRANSSPLICED} {Pfam: CC2D2A N-terminal C2 domain [PF15625.8, score=70.6]; Family of unknown function (DUF5523) [PF17661.3, score=35.0]; C2 domain [PF00168.32, score=22.3]} {Human: ENSG00000048342, CC2D2A, coiled-coil and C2 domain containing 2A, [RH, Score=370, Expect=1e-104]} {Mouse: ENSMUSG00000039765, Cc2d2a, coiled-coil and C2 domain containing 2A, [Score=358, Expect=9e-101]} {Smed: dd_Smed_v6_11189_0_1, dd_Smed_v6_11189_0_1, [RH, Score=444, Expect=3e-130]} {RNA1509_32075, RNA1509_7543} {RNA1310_1060.1, RNA1509_32075, RNA1509_7543} {RNA1509_32075, RNA1509_7543, RNA815_605.1} |
| 4. | MligTC455_11155 | 85 | 1.77 | Mlig455_042600, Mlig455_042613, Mlig455_042644, Mlig455_042679 | Neo: - Age: - |
TRIM45 | 0.955 | - | - | 0.955 | - | - | - | Mlig455_042600 {REF} {Length: 1715} {RNA1310_18709} {RNA815_48235} Mlig455_042613 {REF} {Length: 2452} {RNA1310_18709} {RNA815_48235} Mlig455_042644 {REF} {Length: 3624} {Pfam: B-box zinc finger [PF00643.26, score=45.9]; zinc-RING finger domain [PF14634.8, score=21.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.5]} {Human: ENSG00000134253, TRIM45, tripartite motif containing 45, [RH, Score=92.0, Expect=1e-18]} {Mouse: ENSMUSG00000033233, Trim45, tripartite motif-containing 45, [RH, Score=83.6, Expect=4e-16]} {Dmel: FBgn0031999, CG8419, [Score=61.6, Expect=3e-09]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [Score=167, Expect=9e-44]} {RNA1310_18709} {RNA815_32411} Mlig455_042679 {REF} {Length: 3519} {Pfam: B-box zinc finger [PF00643.26, score=46.5]; zinc-RING finger domain [PF14634.8, score=22.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.8]; RING-type zinc-finger [PF13445.8, score=19.4]} {Human: ENSG00000134253, TRIM45, tripartite motif containing 45, [RH, Score=91.7, Expect=2e-18]} {Mouse: ENSMUSG00000033233, Trim45, tripartite motif-containing 45, [RH, Score=85.5, Expect=1e-16]} {Dmel: FBgn0031999, CG8419, [RH, Score=64.7, Expect=2e-10]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [Score=169, Expect=2e-44]} {RNA1310_18709} {RNA815_32411} |
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