TomoSeq data search

Data search

Results for MligTC455_30766

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30766

539

11.22

Mlig455_013238

Neo: -

Age: -

PIEZO1

Mlig455_013238 {REF} {Length: 9234} {TRANSSPLICED} {Pfam: Piezo non-specific cation channel, R-Ras-binding domain [PF12166.10, score=284.5]; Piezo [PF15917.7, score=59.2]} {Human: ENSG00000103335, PIEZO1, piezo type mechanosensitive ion channel component 1, [Score=313, Expect=6e-85]; ENSG00000154864, PIEZO2, piezo type mechanosensitive ion channel component 2, [Score=298, Expect=3e-80]} {Mouse: ENSMUSG00000014444, Piezo1, piezo-type mechanosensitive ion channel component 1, [Score=300, Expect=8e-81]} {Dmel: FBgn0264953, Piezo, [Score=328, Expect=1e-89]} {Celegans: WBGene00007505, pezo-1, Piezo-type mechanosensitive ion channel component, [Score=322, Expect=3e-88]} {Smed: dd_Smed_v6_7182_0_3, dd_Smed_v6_7182_0_3, [Score=463, Expect=3e-131]} {RNA1509_28229} {RNA1310_145.1} {RNA815_2680}

Cumulative graph for MligTC455_30766

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.425	3.919	0.36820	1.00000
RegionR2	0.252	3.919	0.62156	0.96553
RegionR3	-0.003	3.919	0.99938	1.00000
RegionR4	0.751	3.919	0.13154	0.36768
RegionR5	0.335	3.919	0.38042	0.73460
RegionR6	0.02	3.919	0.95876	1.00000
RegionR7	-0.645	3.919	0.30358	0.93870
RegionR8	0.715	3.919	0.22690	0.83770

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.269	3.919	0.35643	1.00000
RegenerationR2	0.224	3.919	0.53512	0.88646
RegenerationR3	-0.06	3.919	0.88841	1.00000
RegenerationR4	-0.041	3.919	0.92459	1.00000
RegenerationR5	-0.044	3.919	0.91006	1.00000
RegenerationR6	0.007	3.919	0.98802	1.00000
RegenerationBL	-0.295	3.919	0.60999	0.95527
RegenerationTP	-0.615	3.919	0.31876	0.76414

Genes with expression patterns similar to MligTC455_30766

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30766	539	11.22	Mlig455_013238	Neo: - Age: -	PIEZO1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013238 {REF} {Length: 9234} {TRANSSPLICED} {Pfam: Piezo non-specific cation channel, R-Ras-binding domain [PF12166.10, score=284.5]; Piezo [PF15917.7, score=59.2]} {Human: ENSG00000103335, PIEZO1, piezo type mechanosensitive ion channel component 1, [Score=313, Expect=6e-85]; ENSG00000154864, PIEZO2, piezo type mechanosensitive ion channel component 2, [Score=298, Expect=3e-80]} {Mouse: ENSMUSG00000014444, Piezo1, piezo-type mechanosensitive ion channel component 1, [Score=300, Expect=8e-81]} {Dmel: FBgn0264953, Piezo, [Score=328, Expect=1e-89]} {Celegans: WBGene00007505, pezo-1, Piezo-type mechanosensitive ion channel component, [Score=322, Expect=3e-88]} {Smed: dd_Smed_v6_7182_0_3, dd_Smed_v6_7182_0_3, [Score=463, Expect=3e-131]} {RNA1509_28229} {RNA1310_145.1} {RNA815_2680}
2.	MligTC455_30767	538	11.21	Mlig455_013310	Neo: - Age: Down-Up-Down	PIEZO1	5.996	1.000	1.000	1.000	1.000	0.996	1.000	Mlig455_013310 {REF} {Length: 9219} {TRANSSPLICED} {Pfam: Piezo [PF15917.7, score=63.3]} {Human: ENSG00000103335, PIEZO1, piezo type mechanosensitive ion channel component 1, [Score=224, Expect=6e-59]} {Mouse: ENSMUSG00000041482, Piezo2, piezo-type mechanosensitive ion channel component 2, [Score=203, Expect=2e-52]; ENSMUSG00000014444, Piezo1, piezo-type mechanosensitive ion channel component 1, [Score=202, Expect=2e-52]} {Dmel: FBgn0264953, Piezo, [Score=149, Expect=9e-36]} {Celegans: WBGene00007505, pezo-1, Piezo-type mechanosensitive ion channel component, [Score=180, Expect=1e-45]} {Smed: dd_Smed_v6_7182_0_3, dd_Smed_v6_7182_0_3, [Score=312, Expect=6e-88]} {RNA1509_14155} {RNA1310_145.1} {RNA815_2680}
3.	MligTC455_30765	539	11.22	Mlig455_013215	Neo: - Age: Up-Down-Down	PIEZO1	5.994	1.000	1.000	1.000	1.000	0.995	0.999	Mlig455_013215 {REF} {Length: 9245} {TRANSSPLICED} {Pfam: Piezo non-specific cation channel, R-Ras-binding domain [PF12166.10, score=284.5]; Piezo [PF15917.7, score=59.8]} {Human: ENSG00000103335, PIEZO1, piezo type mechanosensitive ion channel component 1, [Score=316, Expect=1e-85]; ENSG00000154864, PIEZO2, piezo type mechanosensitive ion channel component 2, [Score=301, Expect=3e-81]} {Mouse: ENSMUSG00000014444, Piezo1, piezo-type mechanosensitive ion channel component 1, [RH, Score=303, Expect=9e-82]} {Dmel: FBgn0264953, Piezo, [Score=327, Expect=3e-89]} {Celegans: WBGene00007505, pezo-1, Piezo-type mechanosensitive ion channel component, [Score=310, Expect=1e-84]} {Smed: dd_Smed_v6_7182_0_5, dd_Smed_v6_7182_0_5, [Score=445, Expect=1e-125]} {RNA1509_3592} {RNA1310_145.1, RNA1509_3592} {RNA1509_3592, RNA815_2680}
4.	MligTC455_43970	595	12.39	Mlig455_055475	Neo: - Age: -	CNBP	1.735	-	-	-	0.776	-	0.959	Mlig455_055475 {REF} {Length: 2082} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=152.7]; Zinc knuckle [PF14392.8, score=40.9]; GAG-polyprotein viral zinc-finger [PF14787.8, score=31.5]; Zinc knuckle [PF13917.8, score=22.9]} {Human: ENSG00000169714, CNBP, CCHC-type zinc finger nucleic acid binding protein, [RH, Score=91.7, Expect=9e-23]} {Mouse: ENSMUSG00000030057, Cnbp, cellular nucleic acid binding protein, [RH, Score=91.7, Expect=6e-23]} {Dmel: FBgn0034802, CNBP, CCHC-type zinc finger nucleic acid binding protein, [RH, Score=80.5, Expect=7e-19]} {Celegans: WBGene00019537, K08D12.3, [Score=62.0, Expect=3e-12]} {Smed: dd_Smed_v6_947_0_1, dd_Smed_v6_947_0_1, [RH, Score=115, Expect=2e-32]} {RNA1509_36940, RNA1509_42112} {RNA1310_29194, RNA1509_36940, RNA1509_42112} {RNA1509_36940, RNA1509_42112, RNA815_13634}
5.	MligTC455_05942	312	6.51	Mlig455_028091	Neo: Int S/G2/M Age: Up-Down-Up, logFC(26M/2M)=0.597	TBL3	0.955	-	-	-	-	0.955	-	Mlig455_028091 {REF} {Length: 4030} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=104.1]; Utp13 specific WD40 associated domain [PF08625.13, score=82.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=43.0]} {Human: ENSG00000183751, TBL3, transducin beta like 3, [RH, Score=314, Expect=2e-94]} {Mouse: ENSMUSG00000040688, Tbl3, transducin (beta)-like 3, [RH, Score=314, Expect=2e-94]} {Dmel: FBgn0033454, CG1671, [RH, Score=187, Expect=3e-49]} {Celegans: WBGene00013143, Y53C12B.1, [RH, Score=197, Expect=5e-53]} {Smed: dd_Smed_v6_10336_0_1, dd_Smed_v6_10336_0_1, [RH, Score=242, Expect=2e-68]} {RNA1509_9098} {RNA1310_6115} {RNA815_12794}
6.	MligTC455_45527	2426	50.54	Mlig455_045403	Neo: - Age: logFC(26M/2M)=-0.359	GGT1	0.95	-	-	-	-	-	0.950	Mlig455_045403 {REF} {Length: 2378} {Pfam: Gamma-glutamyltranspeptidase [PF01019.23, score=514.6]} {Human: ENSG00000100031, GGT1, gamma-glutamyltransferase 1, [RH, Score=403, Expect=2e-133]} {Mouse: ENSMUSG00000006345, Ggt1, gamma-glutamyltransferase 1, [RH, Score=389, Expect=5e-128]} {Dmel: FBgn0030796, CG4829, [RH, Score=332, Expect=1e-104]} {Celegans: WBGene00016906, C53D5.5, [RH, Score=372, Expect=7e-121]} {Smed: dd_Smed_v6_4591_0_1, dd_Smed_v6_4591_0_1, [RH, Score=425, Expect=6e-142]} {RNA1509_21080, RNA1509_24704, RNA1509_35437} {RNA1310_10883.2, RNA1509_21080, RNA1509_24704, RNA1509_35437} {RNA1509_21080, RNA1509_24704, RNA1509_35437, RNA815_3555.1}

Berezikov Lab - 2020-2021 © ERIBA