Data search
Results for MligTC455_30790
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_30790 | 1029 | 21.43 | Mlig455_059628 | Neo: - Age: - |
EIF2S2 | Mlig455_059628 {REF} {Length: 2840} {Pfam: Domain found in IF2B/IF5 [PF01873.19, score=133.8]} {Human: ENSG00000125977, EIF2S2, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=252, Expect=6e-83]} {Mouse: ENSMUSG00000074656, Eif2s2, eukaryotic translation initiation factor 2, subunit 2 (beta), [RH, Score=257, Expect=2e-85]} {Dmel: FBgn0004926, eIF2beta, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=240, Expect=5e-79]} {Celegans: WBGene00010560, eif-2beta, Eukaryotic translation initiation factor 2 subunit 2, [RH, Score=216, Expect=1e-70]} {Smed: dd_Smed_v6_3764_0_1, dd_Smed_v6_3764_0_1, [RH, Score=182, Expect=1e-57]} {RNA1509_24918} {RNA1310_27097} {RNA815_5088.1} |
Cumulative graph for MligTC455_30790
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.444 | 4.685 | 0.66145 | 1.00000 | |
| RegionR2 | -0.371 | 4.685 | 0.37043 | 0.76510 | |
| RegionR3 | -0.181 | 4.685 | 0.59995 | 1.00000 | |
| RegionR4 | 0.809 | 4.685 | 0.03690 | 0.15709 | |
| RegionR5 | 0.851 | 4.685 | 0.00414 | 0.03005 | |
| RegionR6 | 0.03 | 4.685 | 0.93198 | 1.00000 | |
| RegionR7 | -0.147 | 4.685 | 0.74332 | 1.00000 | |
| RegionR8 | -0.547 | 4.685 | 0.34720 | 0.98097 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.113 | 4.685 | 0.08161 | 0.77869 | |
| RegenerationR2 | 0.324 | 4.685 | 0.34139 | 0.77585 | |
| RegenerationR3 | 0.593 | 4.685 | 0.11775 | 0.53464 | |
| RegenerationR4 | 0.252 | 4.685 | 0.49654 | 0.86728 | |
| RegenerationR5 | 0.295 | 4.685 | 0.37476 | 0.78371 | |
| RegenerationR6 | 0.991 | 4.685 | 0.00765 | 0.10722 | |
| RegenerationBL | 0.683 | 4.685 | 0.10979 | 0.39108 | |
| RegenerationTP | 0.672 | 4.685 | 0.16589 | 0.59655 |
Genes with expression patterns similar to MligTC455_30790
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_30790 | 1029 | 21.43 | Mlig455_059628 | Neo: - Age: - |
EIF2S2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059628 {REF} {Length: 2840} {Pfam: Domain found in IF2B/IF5 [PF01873.19, score=133.8]} {Human: ENSG00000125977, EIF2S2, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=252, Expect=6e-83]} {Mouse: ENSMUSG00000074656, Eif2s2, eukaryotic translation initiation factor 2, subunit 2 (beta), [RH, Score=257, Expect=2e-85]} {Dmel: FBgn0004926, eIF2beta, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=240, Expect=5e-79]} {Celegans: WBGene00010560, eif-2beta, Eukaryotic translation initiation factor 2 subunit 2, [RH, Score=216, Expect=1e-70]} {Smed: dd_Smed_v6_3764_0_1, dd_Smed_v6_3764_0_1, [RH, Score=182, Expect=1e-57]} {RNA1509_24918} {RNA1310_27097} {RNA815_5088.1} |
| 2. | MligTC455_30793 | 762 | 15.88 | Mlig455_059642 | Neo: - Age: - |
4.361 | 0.827 | 0.920 | 0.875 | 0.950 | 0.789 | - | Mlig455_059642 {REF} {Length: 1026} {TRANSSPLICED} {RNA1509_28236, RNA1509_42229} {RNA1310_46418, RNA1509_28236, RNA1509_42229} {RNA1509_28236, RNA1509_42229, RNA815_5088.1} | |
| 3. | MligTC455_48326 | 2328 | 48.51 | Mlig455_016492 | Neo: Int S/G2/M Age: logFC(26M/2M)=1.013 Regeneration-enriched BL: 1.725 |
EIF2S3B | 2.497 | - | - | 0.770 | 0.758 | - | 0.969 | Mlig455_016492 {REF} {Length: 2643} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=78.9]; Initiation factor eIF2 gamma, C terminal [PF09173.13, score=73.2]; Elongation factor Tu domain 2 [PF03144.27, score=45.3]} {Human: ENSG00000180574, EIF2S3B, eukaryotic translation initiation factor 2 subunit gamma B, [RH, Score=686, Expect=0.0]} {Mouse: ENSMUSG00000069049, Eif2s3y, eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, [Score=701, Expect=0.0]; ENSMUSG00000035150, Eif2s3x, eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, [Score=697, Expect=0.0]} {Dmel: FBgn0263740, eIF2gamma, eukaryotic translation initiation factor 2 subunit gamma, [Score=677, Expect=0.0]} {Celegans: WBGene00021466, eif-2gamma, Eukaryotic Initiation Factor, [RH, Score=677, Expect=0.0]} {Smed: dd_Smed_v6_980_0_1, dd_Smed_v6_980_0_1, [Score=634, Expect=0.0]} {RNA1509_3210} {RNA1310_16815.1} {RNA815_7319} |
| 4. | MligTC455_48327 | 2347 | 48.9 | Mlig455_046907 | Neo: - Age: Up-Down-Up Regeneration-enriched BL: 1.482 |
EIF2S3 | 2.463 | - | - | 0.712 | 0.798 | - | 0.953 | Mlig455_046907 {REF} {Length: 2665} {TRANSSPLICED} {Pfam: Initiation factor eIF2 gamma, C terminal [PF09173.13, score=114.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=78.7]; Elongation factor Tu domain 2 [PF03144.27, score=44.1]} {Human: ENSG00000130741, EIF2S3, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=741, Expect=0.0]; ENSG00000180574, EIF2S3B, eukaryotic translation initiation factor 2 subunit gamma B, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000069049, Eif2s3y, eukaryotic translation initiation factor 2, subunit 3, structural gene Y-linked, [RH, Score=745, Expect=0.0]; ENSMUSG00000035150, Eif2s3x, eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0263740, eIF2gamma, eukaryotic translation initiation factor 2 subunit gamma, [RH, Score=713, Expect=0.0]} {Celegans: WBGene00021466, eif-2gamma, Eukaryotic Initiation Factor, [RH, Score=712, Expect=0.0]} {Smed: dd_Smed_v6_980_0_1, dd_Smed_v6_980_0_1, [RH, Score=678, Expect=0.0]} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1310_16815.1, RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895} {RNA1509_13308, RNA1509_3210, RNA1509_32670, RNA1509_43746, RNA1509_58895, RNA815_7319} |
| 5. | MligTC455_41031 | 556 | 11.58 | Mlig455_004806 | Neo: - Age: - |
TFG | 2.419 | 0.709 | - | - | 0.733 | - | 0.977 | Mlig455_004806 {REF} {Length: 2997} {TRANSSPLICED} {Pfam: PB1 domain [PF00564.26, score=45.2]} {Human: ENSG00000114354, TFG, TRK-fused gene, [RH, Score=144, Expect=5e-39]} {Mouse: ENSMUSG00000022757, Tfg, Trk-fused gene, [RH, Score=145, Expect=9e-40]} {Celegans: WBGene00006565, tfg-1, TFG related, [RH, Score=63.5, Expect=7e-11]} {Smed: dd_Smed_v6_1813_0_1, dd_Smed_v6_1813_0_1, [RH, Score=136, Expect=4e-37]} {RNA1509_26546, RNA1509_36302, RNA1509_42234, RNA1509_43758} {RNA1310_16127, RNA1509_26546, RNA1509_36302, RNA1509_42234, RNA1509_43758} {RNA1509_26546, RNA1509_36302, RNA1509_42234, RNA1509_43758, RNA815_18306} |
| 6. | MligTC455_46938 | 1850 | 38.54 | Mlig455_008582 | Neo: - Age: - |
TMEM45B | 1.681 | - | - | 0.954 | - | - | 0.727 | Mlig455_008582 {REF} {Length: 3037} {TRANSSPLICED} {Pfam: Family of unknown function (DUF716) [PF04819.14, score=94.1]} {Human: ENSG00000151715, TMEM45B, transmembrane protein 45B, [RH, Score=122, Expect=4e-32]} {Mouse: ENSMUSG00000041737, Tmem45b, transmembrane protein 45b, [RH, Score=123, Expect=8e-33]} {Smed: dd_Smed_v6_1542_0_1, dd_Smed_v6_1542_0_1, [RH, Score=133, Expect=8e-37]} {RNA1509_5243} {RNA1310_25344} {RNA815_10825} |
| 7. | MligTC455_06739 | 584 | 12.16 | Mlig455_043661, Mlig455_047495 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_043661 {REF} {Length: 2690} {TRANSSPLICED} {RNA1509_39357} {RNA1310_22610.2} {RNA815_24494} Mlig455_047495 {REF} {Length: 2418} {TRANSSPLICED} {RNA1509_39357} {RNA1310_22610.2} {RNA815_24494} |
Berezikov Lab - 2020-2021 © ERIBA