Data search


search
Exact
Search

Results for MligTC455_30825

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30825 29 0.60 Mlig455_047611

Neo: -

Age: -

CUBN Mlig455_047611 {REF} {Length: 4561} {Pfam: CUB domain [PF00431.22, score=147.9]} {Human: ENSG00000107611, CUBN, cubilin, [Score=66.6, Expect=2e-10]; ENSG00000095587, TLL2, tolloid like 2, [Score=64.7, Expect=6e-10]} {Mouse: ENSMUSG00000025013, Tll2, tolloid-like 2, [Score=67.0, Expect=8e-11]} {Dmel: FBgn0261262, CG42613, [Score=97.4, Expect=2e-20]} {Celegans: WBGene00004944, sol-1, Suppressor of lurcher protein 1, [Score=68.9, Expect=8e-12]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=253, Expect=3e-72]} {RNA1509_30788} {RNA1310_1910} {RNA815_5892}

Cumulative graph for MligTC455_30825

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.651 0.909 0.99994 1.00000
RegionR2 1 0.909 0.39949 0.79390
RegionR3 0.472 0.909 0.53181 1.00000
RegionR4 0.895 0.909 0.99963 1.00000
RegionR5 1.434 0.909 0.27935 0.60700
RegionR6 3.465 0.909 0.00242 0.06903
RegionR7 -2.587 0.909 0.99970 1.00000
RegionR8 0.973 0.909 0.43909 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.418 0.909 1.00000 1.00000
RegenerationR2 -0.694 0.909 0.37766 0.80028
RegenerationR3 0.542 0.909 0.67865 0.93987
RegenerationR4 0.797 0.909 0.29999 0.74166
RegenerationR5 -0.398 0.909 0.78657 0.98373
RegenerationR6 -5.567 0.909 0.00060 0.02584
RegenerationBL -4.354 0.909 0.99970 1.00000
RegenerationTP 0.214 0.909 0.79108 1.00000


Genes with expression patterns similar to MligTC455_30825

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30825 29 0.6 Mlig455_047611

Neo: -

Age: -

CUBN 3 - - 1.000 1.000 - 1.000 Mlig455_047611 {REF} {Length: 4561} {Pfam: CUB domain [PF00431.22, score=147.9]} {Human: ENSG00000107611, CUBN, cubilin, [Score=66.6, Expect=2e-10]; ENSG00000095587, TLL2, tolloid like 2, [Score=64.7, Expect=6e-10]} {Mouse: ENSMUSG00000025013, Tll2, tolloid-like 2, [Score=67.0, Expect=8e-11]} {Dmel: FBgn0261262, CG42613, [Score=97.4, Expect=2e-20]} {Celegans: WBGene00004944, sol-1, Suppressor of lurcher protein 1, [Score=68.9, Expect=8e-12]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=253, Expect=3e-72]} {RNA1509_30788} {RNA1310_1910} {RNA815_5892}
2. MligTC455_36571 225 4.68 Mlig455_018019

Neo: -

Age: Up-Down-Down

Region-enriched R4: 2.466/0.03928

0.963 - - - - - 0.963 Mlig455_018019 {REF} {Length: 3541} {RNA1509_41400} {RNA1310_4515.1} {RNA815_3928}
3. MligTC455_17224 155 3.22 Mlig455_069916

Neo: -

Age: -

TBPL2 0.955 - - - - - 0.955 Mlig455_069916 {REF} {Length: 699} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=46.0]} {Human: ENSG00000182521, TBPL2, TATA-box binding protein like 2, [Score=47.0, Expect=1e-06]; ENSG00000112592, TBP, TATA-box binding protein, [Score=45.1, Expect=5e-06]} {Mouse: ENSMUSG00000061809, Tbpl2, TATA box binding protein like 2, [Score=48.1, Expect=3e-07]} {Dmel: FBgn0003687, Tbp, TATA binding protein, [Score=48.1, Expect=2e-07]} {Celegans: WBGene00006577, tlf-1, TBP-Like Factor; TBP-like factor, [Score=45.8, Expect=1e-06]} {RNA1509_12203} {RNA1310_37970} {RNA815_7432}
4. MligTC455_48629 28 0.59 Mlig455_025011

Neo: -

Age: -

TRHR 0.954 - - - - - 0.954 Mlig455_025011 {REF} {Length: 3554} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=158.8]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=22.7]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [RH, Score=248, Expect=9e-78]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [RH, Score=248, Expect=3e-78]} {Dmel: FBgn0038874, ETHR, [Score=141, Expect=4e-37]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=218, Expect=5e-67]} {Smed: dd_Smed_v6_16834_0_1, dd_Smed_v6_16834_0_1, [Score=246, Expect=5e-78]} {RNA1310_37398} {RNA815_29942}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA