M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_30861

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30861 59 1.23 Mlig455_059659

Neo: -

Age: -

 TRIP12 Mlig455_059659 {REF} {Length: 5966} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=250.2]; WWE domain [PF02825.22, score=62.8]} {Human: ENSG00000153827, TRIP12, thyroid hormone receptor interactor 12, [RH, Score=999, Expect=0.0]} {Mouse: ENSMUSG00000026219, Trip12, thyroid hormone receptor interactor 12, [RH, Score=995, Expect=0.0]} {Dmel: FBgn0260794, ctrip, circadian trip, [RH, Score=338, Expect=5e-93]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [Score=253, Expect=2e-67]} {Smed: dd_Smed_v6_2525_0_1, dd_Smed_v6_2525_0_1, [RH, Score=420, Expect=2e-119]} {RNA1509_44088} {RNA1310_351.1} {RNA815_5070}

Cumulative graph for MligTC455_30861

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.026 1.515 0.99970 1.00000
RegionR2 1.777 1.515 0.19095 0.54677
RegionR3 0.089 1.515 0.74887 1.00000
RegionR4 0.493 1.515 0.62689 0.93585
RegionR5 0.214 1.515 0.70500 1.00000
RegionR6 0.982 1.515 0.42509 0.99154
RegionR7 3.14 1.515 0.00788 0.14799
RegionR8 -3.669 1.515 0.99957 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.186 1.515 0.99999 1.00000
RegenerationR2 -0.124 1.515 0.85540 1.00000
RegenerationR3 1.924 1.515 0.05046 0.38954
RegenerationR4 0.016 1.515 0.99189 1.00000
RegenerationR5 0.604 1.515 0.49664 0.85705
RegenerationR6 0.351 1.515 0.72150 0.93642
RegenerationBL -0.671 1.515 0.90892 1.00000
RegenerationTP 0.399 1.515 0.73497 1.00000


Genes with expression patterns similar to MligTC455_30861

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30861 59 1.23 Mlig455_059659

Neo: -

Age: -

 TRIP12 4 - - 1.000 1.000 1.000 1.000 Mlig455_059659 {REF} {Length: 5966} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=250.2]; WWE domain [PF02825.22, score=62.8]} {Human: ENSG00000153827, TRIP12, thyroid hormone receptor interactor 12, [RH, Score=999, Expect=0.0]} {Mouse: ENSMUSG00000026219, Trip12, thyroid hormone receptor interactor 12, [RH, Score=995, Expect=0.0]} {Dmel: FBgn0260794, ctrip, circadian trip, [RH, Score=338, Expect=5e-93]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [Score=253, Expect=2e-67]} {Smed: dd_Smed_v6_2525_0_1, dd_Smed_v6_2525_0_1, [RH, Score=420, Expect=2e-119]} {RNA1509_44088} {RNA1310_351.1} {RNA815_5070}
2. MligTC455_19795 50 1.05 Mlig455_015163, Mlig455_015285

Neo: -

Age: Up-Down-Down

 1.873 - - 0.917 - 0.956 -

Mlig455_015163 {REF} {Length: 4537} {TRANSSPLICED} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=183.2]} {Smed: dd_Smed_v6_23771_0_1, dd_Smed_v6_23771_0_1, [RH, Score=366, Expect=7e-119]} {RNA1509_44797} {RNA1310_13221} {RNA815_45407}

Mlig455_015285 {REF} {Length: 4094} {TRANSSPLICED} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=183.3]} {Smed: dd_Smed_v6_23771_0_1, dd_Smed_v6_23771_0_1, [RH, Score=366, Expect=9e-119]} {RNA1509_57431} {RNA1310_13221} {RNA815_45407}
3. MligTC455_16243 108 2.26 Mlig455_063048

Neo: -

Age: -

 1.851 - - 0.973 0.878 - - Mlig455_063048 {REF} {Length: 2934} {TRANSSPLICED} {RNA1509_56072} {RNA1310_35648.1, RNA1509_56072} {RNA1509_56072, RNA815_22277}
4. MligTC455_51176 71 1.48 Mlig455_024765

Neo: -

Age: -

 SAXO1 1.793 - - 0.842 - 0.951 - Mlig455_024765 {REF} {Length: 1803} {Human: ENSG00000155875, SAXO1, stabilizer of axonemal microtubules 1, [Score=48.5, Expect=9e-06]} {Smed: dd_Smed_v6_5551_0_1, dd_Smed_v6_5551_0_1, [Score=55.5, Expect=2e-08]} {RNA1509_36492} {RNA1310_14560} {RNA815_5366}
5. MligTC455_35802 114 2.38 Mlig455_051876, Mlig455_051902, Mlig455_053140

Neo: -

Age: -

 CACNA2D1 1.772 - - 0.963 - 0.809 -

Mlig455_051876 {REF} {Length: 3144} {Pfam: Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=89.1]} {Human: ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [Score=84.7, Expect=2e-16]} {RNA1509_55590} {RNA1310_60852} {RNA815_15380}

Mlig455_051902 {REF} {Length: 4662} {Pfam: VWA N-terminal [PF08399.13, score=90.4]; Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=87.6]; von Willebrand factor type A domain [PF00092.30, score=38.6]; Cache domain [PF02743.20, score=27.5]; von Willebrand factor type A domain [PF13519.8, score=26.5]} {Human: ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [RH, Score=326, Expect=8e-94]} {Mouse: ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [RH, Score=326, Expect=7e-94]} {Dmel: FBgn0261041, stj, straightjacket, [Score=229, Expect=7e-61]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=141, Expect=9e-34]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [Score=153, Expect=1e-37]} {RNA1509_55590} {RNA1310_7325.1, RNA1509_55590} {RNA1509_55590, RNA815_14878}

Mlig455_053140 {REF} {Length: 3265} {Pfam: Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=87.9]} {Human: ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [Score=87.0, Expect=8e-17]} {Mouse: ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=50.4, Expect=9e-06]} {RNA1509_55590} {RNA1310_7325.1} {RNA815_14878}
6. MligTC455_17932 22 0.45 Mlig455_002921, Mlig455_002939

Neo: -

Age: -

 KCP 1.746 - - 0.764 - 0.982 -

Mlig455_002921 {REF} {Length: 969} {Pfam: von Willebrand factor type C domain [PF00093.20, score=44.3]; EGF domain [PF12947.9, score=28.3]; MSP1 EGF domain 1 [PF12946.9, score=18.9]} {Human: ENSG00000135253, KCP, kielin/chordin-like protein, [Score=55.5, Expect=2e-07]} {Mouse: ENSMUSG00000026042, Col5a2, collagen, type V, alpha 2, [Score=58.5, Expect=1e-08]} {Celegans: WBGene00008952, F19C6.3, [Score=51.2, Expect=1e-06]} {Smed: dd_Smed_v6_11653_0_1, dd_Smed_v6_11653_0_1, [Score=58.5, Expect=5e-09]} {RNA1310_81278}

Mlig455_002939 {REF} {Length: 884} {Pfam: von Willebrand factor type C domain [PF00093.20, score=44.7]; EGF domain [PF12947.9, score=28.9]; MSP1 EGF domain 1 [PF12946.9, score=20.4]} {Human: ENSG00000135253, KCP, kielin/chordin-like protein, [Score=55.5, Expect=1e-07]} {Mouse: ENSMUSG00000026042, Col5a2, collagen, type V, alpha 2, [Score=57.8, Expect=2e-08]} {Celegans: WBGene00008952, F19C6.3, [Score=51.2, Expect=8e-07]} {Smed: dd_Smed_v6_11653_0_1, dd_Smed_v6_11653_0_1, [Score=51.6, Expect=5e-07]} {RNA1310_81278}
7. MligTC455_51395 121 2.52 Mlig455_005756

Neo: -

Age: -

 IGFALS 1.739 - - 0.966 - 0.773 - Mlig455_005756 {REF} {Length: 3785} {Pfam: Leucine rich repeat [PF13855.8, score=285.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=116.4]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=90.8]; Leucine-rich repeat [PF14580.8, score=72.0]; Leucine Rich Repeat [PF00560.35, score=37.6]} {Human: ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [RH, Score=160, Expect=8e-41]} {Mouse: ENSMUSG00000046070, Igfals, insulin-like growth factor binding protein, acid labile subunit, [RH, Score=152, Expect=3e-38]} {Dmel: FBgn0259677, CG42346, [RH, Score=140, Expect=1e-33]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=129, Expect=3e-30]} {Smed: dd_Smed_v6_3513_0_1, dd_Smed_v6_3513_0_1, [RH, Score=80.1, Expect=1e-15]} {RNA1509_59023} {RNA1310_6354} {RNA815_7087}
8. MligTC455_47641 250 5.21 Mlig455_007026, Mlig455_069139

Neo: -

Age: Down-Up-Up

 0.981 - - 0.981 - - -

Mlig455_007026 {REF} {Length: 2110} {RNA1509_55500} {RNA1310_26431} {RNA815_24412}

Mlig455_069139 {REF} {Length: 2221} {RNA1509_55500} {RNA1310_26431, RNA1509_55500} {RNA1509_55500, RNA815_24412}
9. MligTC455_42780 194 4.05 Mlig455_053699

Neo: -

Age: -

 TIA1 0.98 - - 0.980 - - - Mlig455_053699 {REF} {Length: 2917} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=137.6]; RNA binding motif [PF08777.13, score=27.7]; RNA recognition motif [PF16367.7, score=27.3]; Cytosolic domain of 10TM putative phosphate transporter [PF14703.8, score=22.0]; Nup53/35/40-type RNA recognition motif [PF05172.15, score=19.3]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=19.0]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [RH, Score=237, Expect=3e-74]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [RH, Score=234, Expect=2e-73]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [RH, Score=225, Expect=2e-70]} {Dmel: FBgn0085391, trv, trivet, [RH, Score=240, Expect=2e-74]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [RH, Score=231, Expect=6e-72]} {Smed: dd_Smed_v6_10924_0_1, dd_Smed_v6_10924_0_1, [RH, Score=360, Expect=8e-123]} {RNA1509_20262} {RNA1310_6771, RNA1509_20262} {RNA1509_20262, RNA815_11494}
10. MligTC455_46418 178 3.71 Mlig455_056428

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_056428 {REF} {Length: 3626} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=49.8]} {RNA1509_14623} {RNA1310_25579, RNA1509_14623} {RNA1509_14623, RNA815_35028}
11. MligTC455_52776 568 11.83 Mlig455_014951, Mlig455_045141, Mlig455_045176

Neo: -

Age: -

 FUT6 0.971 - - - 0.971 - -

Mlig455_014951 {REF} {Length: 3156} {Pfam: Glycosyltransferase family 10 (fucosyltransferase) C-term [PF00852.21, score=171.0]; Fucosyltransferase, N-terminal [PF17039.7, score=43.2]} {Human: ENSG00000156413, FUT6, fucosyltransferase 6, [Score=123, Expect=4e-31]; ENSG00000130383, FUT5, fucosyltransferase 5, [Score=121, Expect=4e-30]; ENSG00000180549, FUT7, fucosyltransferase 7, [Score=120, Expect=4e-30]; ENSG00000171124, FUT3, fucosyltransferase 3 (Lewis blood group), [Score=117, Expect=6e-29]} {Mouse: ENSMUSG00000036587, Fut7, fucosyltransferase 7, [Score=123, Expect=3e-31]} {Dmel: FBgn0036485, FucTA, [Score=140, Expect=2e-36]} {Celegans: WBGene00001505, fut-1, Alpha-(1,3)-fucosyltransferase fut-1, [Score=110, Expect=3e-26]} {Smed: dd_Smed_v6_8368_0_1, dd_Smed_v6_8368_0_1, [Score=140, Expect=6e-37]} {RNA1509_53629} {RNA1310_21454.2, RNA1509_53629} {RNA1509_53629, RNA815_20125}

Mlig455_045141 {REF} {Length: 2058} {Pfam: Glycosyltransferase family 10 (fucosyltransferase) C-term [PF00852.21, score=171.7]; Fucosyltransferase, N-terminal [PF17039.7, score=44.3]} {Human: ENSG00000156413, FUT6, fucosyltransferase 6, [Score=125, Expect=6e-32]; ENSG00000180549, FUT7, fucosyltransferase 7, [Score=124, Expect=2e-31]; ENSG00000130383, FUT5, fucosyltransferase 5, [Score=123, Expect=5e-31]; ENSG00000171124, FUT3, fucosyltransferase 3 (Lewis blood group), [Score=120, Expect=7e-30]} {Mouse: ENSMUSG00000036587, Fut7, fucosyltransferase 7, [Score=127, Expect=1e-32]} {Dmel: FBgn0036485, FucTA, [Score=137, Expect=1e-35]} {Celegans: WBGene00001505, fut-1, Alpha-(1,3)-fucosyltransferase fut-1, [Score=109, Expect=3e-26]} {Smed: dd_Smed_v6_8368_0_1, dd_Smed_v6_8368_0_1, [Score=140, Expect=5e-37]} {RNA1509_53629} {RNA1310_21454.2} {RNA815_20125}

Mlig455_045176 {REF} {Length: 3201} {Pfam: Glycosyltransferase family 10 (fucosyltransferase) C-term [PF00852.21, score=171.7]; Fucosyltransferase, N-terminal [PF17039.7, score=44.3]} {Human: ENSG00000156413, FUT6, fucosyltransferase 6, [Score=125, Expect=6e-32]; ENSG00000180549, FUT7, fucosyltransferase 7, [Score=124, Expect=2e-31]; ENSG00000130383, FUT5, fucosyltransferase 5, [Score=123, Expect=5e-31]; ENSG00000171124, FUT3, fucosyltransferase 3 (Lewis blood group), [Score=120, Expect=7e-30]} {Mouse: ENSMUSG00000036587, Fut7, fucosyltransferase 7, [Score=127, Expect=1e-32]} {Dmel: FBgn0036485, FucTA, [Score=137, Expect=1e-35]} {Celegans: WBGene00001505, fut-1, Alpha-(1,3)-fucosyltransferase fut-1, [Score=109, Expect=3e-26]} {Smed: dd_Smed_v6_8368_0_1, dd_Smed_v6_8368_0_1, [Score=140, Expect=5e-37]} {RNA1509_53629} {RNA1310_21454.2} {RNA815_20125}
12. MligTC455_37269 173 3.61 Mlig455_020047

Neo: -

Age: -

 CASP3 0.97 - - 0.970 - - - Mlig455_020047 {REF} {Length: 2828} {Pfam: Caspase domain [PF00656.24, score=94.7]; Ankyrin repeats (3 copies) [PF12796.9, score=79.1]; Ankyrin repeats (many copies) [PF13857.8, score=62.0]; Ankyrin repeats (many copies) [PF13637.8, score=58.0]; Ankyrin repeat [PF13606.8, score=40.7]; Ankyrin repeat [PF00023.32, score=31.7]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=111, Expect=1e-26]; ENSG00000003400, CASP10, caspase 10, [Score=107, Expect=9e-24]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=106, Expect=5e-25]; ENSMUSG00000025076, Casp7, caspase 7, [Score=106, Expect=7e-25]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=96.3, Expect=2e-21]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=81.6, Expect=9e-17]} {Smed: dd_Smed_v6_10883_0_1, dd_Smed_v6_10883_0_1, [Score=107, Expect=1e-24]} {RNA1509_54818} {RNA1310_7187} {RNA815_8712}
13. MligTC455_38427 10 0.22 Mlig455_044444

Neo: -

Age: -

 KYAT1 0.969 - - - - 0.969 - Mlig455_044444 {REF} {Length: 1698} {Pfam: Aminotransferase class I and II [PF00155.23, score=108.8]} {Human: ENSG00000171097, KYAT1, kynurenine aminotransferase 1, [Score=90.1, Expect=7e-19]} {Mouse: ENSMUSG00000039648, Kyat1, kynurenine aminotransferase 1, [Score=87.0, Expect=4e-18]}
14. MligTC455_49338 92 1.92 Mlig455_019714

Neo: -

Age: -

Region-enriched R2: 3.827/0.02214
Region-enriched R7: 3.806/0.00162
Region-enriched R6: 3.186/0.02925

 CA7 0.968 - - 0.968 - - - Mlig455_019714 {REF} {Length: 2496} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=207.6]} {Human: ENSG00000168748, CA7, carbonic anhydrase 7, [Score=157, Expect=2e-45]} {Mouse: ENSMUSG00000031883, Car7, carbonic anhydrase 7, [Score=156, Expect=3e-45]} {Dmel: FBgn0027844, CAH1, Carbonic anhydrase 1, [Score=129, Expect=8e-35]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=89.0, Expect=6e-20]} {Smed: dd_Smed_v6_11683_0_1, dd_Smed_v6_11683_0_1, [Score=159, Expect=4e-46]} {RNA1509_43765} {RNA1310_22186, RNA1509_43765} {RNA1509_43765, RNA815_18428}
15. MligTC455_13082 8 0.17 Mlig455_048429

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_048429 {REF} {Length: 2938} {Pfam: Peptidase family M13 [PF05649.15, score=24.6]}
16. MligTC455_17729 11 0.22 Mlig455_005654

Neo: -

Age: -

 CALML3 0.965 - - 0.965 - - - Mlig455_005654 {REF} {Length: 1583} {Pfam: EF hand [PF00036.34, score=110.5]; EF-hand domain pair [PF13499.8, score=105.1]; EF hand [PF13202.8, score=91.2]; EF-hand domain [PF13405.8, score=79.3]; EF-hand domain pair [PF13833.8, score=78.4]; EF-hand domain [PF14658.8, score=37.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=33.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.8]; Dockerin type I domain [PF00404.20, score=25.0]; EF-hand domain [PF08976.13, score=22.6]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=105, Expect=4e-29]; ENSG00000143933, CALM2, calmodulin 2, [Score=103, Expect=1e-27]; ENSG00000160014, CALM3, calmodulin 3, [Score=102, Expect=9e-28]; ENSG00000198668, CALM1, calmodulin 1, [Score=102, Expect=8e-28]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=110, Expect=3e-31]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=105, Expect=4e-29]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=104, Expect=6e-29]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=104, Expect=4e-29]} {RNA1310_77551} {RNA815_27181}
17. MligTC455_19059 32 0.66 Mlig455_001467

Neo: -

Age: -

 INSC 0.963 - - 0.963 - - - Mlig455_001467 {REF} {Length: 2215} {Pfam: Protein inscuteable C-terminal [PF19427.1, score=199.4]} {Human: ENSG00000188487, INSC, INSC, spindle orientation adaptor protein, [Score=183, Expect=1e-50]} {Mouse: ENSMUSG00000048782, Insc, INSC spindle orientation adaptor protein, [Score=180, Expect=9e-50]} {Smed: dd_Smed_v6_13059_0_1, dd_Smed_v6_13059_0_1, [Score=118, Expect=5e-28]} {RNA1310_37397}
18. MligTC455_11660 8 0.17 Mlig455_064306

Neo: -

Age: Up-Down-Down

 0.962 - - - - 0.962 - Mlig455_064306 {REF} {Length: 789} {Pfam: Integrase core domain [PF00665.28, score=46.4]; Integrase zinc binding domain [PF17921.3, score=28.1]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=132, Expect=1e-35]} {RNA1509_2485} {RNA1310_391} {RNA815_131.1}
19. MligTC455_19025 86 1.79 Mlig455_037631

Neo: Int S/G2/M

Age: Up-Down-Down

 0.96 - - - - 0.960 - Mlig455_037631 {REF} {Length: 2219} {RNA1509_32306} {RNA1310_31823.1} {RNA815_14423}
20. MligTC455_40341 106 2.2 Mlig455_060207, Mlig455_070456

Neo: -

Age: Down-Down-Up

Region-enriched R2: 6.703/0.00648
Region-enriched R3: 4.045/0.03110

 NPY2R 0.96 - - - - 0.960 -

Mlig455_060207 {REF} {Length: 3062} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=177.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=47.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=29.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.6]} {Human: ENSG00000185149, NPY2R, neuropeptide Y receptor Y2, [RH, Score=178, Expect=9e-51]} {Mouse: ENSMUSG00000028004, Npy2r, neuropeptide Y receptor Y2, [RH, Score=176, Expect=3e-50]; ENSMUSG00000031932, Gpr83, G protein-coupled receptor 83, [RH, Score=176, Expect=1e-49]} {Dmel: FBgn0036934, sNPF-R, short neuropeptide F receptor, [Score=245, Expect=4e-74]} {Celegans: WBGene00009619, npr-6, NeuroPeptide Receptor family, [RH, Score=215, Expect=5e-65]} {Smed: dd_Smed_v6_15335_0_1, dd_Smed_v6_15335_0_1, [RH, Score=313, Expect=2e-103]} {RNA1310_18147.1} {RNA815_7986}

Mlig455_070456 {REF} {Length: 3569} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=176.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=46.8]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=29.2]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.3]} {Human: ENSG00000185149, NPY2R, neuropeptide Y receptor Y2, [RH, Score=177, Expect=8e-50]} {Mouse: ENSMUSG00000028004, Npy2r, neuropeptide Y receptor Y2, [RH, Score=175, Expect=3e-49]; ENSMUSG00000031932, Gpr83, G protein-coupled receptor 83, [RH, Score=174, Expect=2e-48]} {Dmel: FBgn0035610, Lkr, Leucokinin receptor, [RH, Score=166, Expect=2e-44]} {Celegans: WBGene00009619, npr-6, NeuroPeptide Receptor family, [Score=215, Expect=4e-64]} {Smed: dd_Smed_v6_15335_0_1, dd_Smed_v6_15335_0_1, [RH, Score=315, Expect=8e-103]} {RNA1310_18147.1} {RNA815_7986}
21. MligTC455_44883 146 3.04 Mlig455_045714

Neo: -

Age: Up-Down-Down

Region-enriched R2: 3.068/0.02935

 OGFR 0.96 - - 0.960 - - - Mlig455_045714 {REF} {Length: 5397} {Pfam: PT repeat [PF04886.14, score=183.6]} {Human: ENSG00000060491, OGFR, opioid growth factor receptor, [Score=75.1, Expect=7e-13]} {Mouse: ENSMUSG00000053198, Prx, periaxin, [RH, Score=56.2, Expect=4e-07]} {Dmel: FBgn0029807, CG3108, [Score=96.3, Expect=2e-19]} {Smed: dd_Smed_v6_5981_0_1, dd_Smed_v6_5981_0_1, [Score=50.8, Expect=2e-06]} {RNA1509_58926} {RNA1310_37131} {RNA815_16145}
22. MligTC455_07100 97 2.02 Mlig455_003124, Mlig455_014179

Neo: -

Age: -

 POU4F1 0.959 - - 0.959 - - -

Mlig455_003124 {REF} {Length: 2773} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=109.3]; Homeodomain [PF00046.31, score=67.1]; Helix-turn-helix domain [PF13560.8, score=22.0]} {Human: ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=271, Expect=6e-87]; ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=269, Expect=4e-86]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=267, Expect=2e-86]} {Mouse: ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=271, Expect=6e-87]; ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=268, Expect=3e-86]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=267, Expect=2e-86]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=264, Expect=4e-85]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=236, Expect=2e-74]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=305, Expect=7e-101]} {RNA1509_57422} {RNA1310_8139.2} {RNA815_32659}

Mlig455_014179 {REF} {Length: 532} {NoTransDecoderORF} {RNA1310_72815} {RNA815_37705}
23. MligTC455_41840 89 1.86 Mlig455_070879

Neo: -

Age: logFC(26M/2M)=1.973

 KCNT2 0.958 - - 0.958 - - - Mlig455_070879 {REF} {Length: 2497} {Human: ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [Score=385, Expect=1e-121]; ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [Score=385, Expect=1e-120]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [Score=384, Expect=2e-121]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [Score=382, Expect=1e-119]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [Score=455, Expect=5e-146]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [Score=347, Expect=6e-108]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [Score=476, Expect=5e-156]} {RNA1509_17871} {RNA1310_1587.3} {RNA815_1330}
24. MligTC455_44998 385 8.02 Mlig455_041387

Neo: -

Age: logFC(26M/2M)=-0.278

Region-enriched R3: 5.457/0.00000
Region-enriched R2: 4.938/0.00139

 FZD4 0.957 - - - - 0.957 - Mlig455_041387 {REF} {Length: 3889} {Pfam: Frizzled/Smoothened family membrane region [PF01534.19, score=311.1]; Fz domain [PF01392.24, score=97.0]} {Human: ENSG00000174804, FZD4, frizzled class receptor 4, [Score=416, Expect=2e-138]} {Mouse: ENSMUSG00000049791, Fzd4, frizzled class receptor 4, [Score=414, Expect=4e-138]} {Dmel: FBgn0001085, fz, frizzled, [Score=284, Expect=2e-87]} {Celegans: WBGene00003006, lin-17, Transmembrane receptor LIN-17, [RH, Score=263, Expect=9e-80]} {Smed: dd_Smed_v6_7210_0_1, dd_Smed_v6_7210_0_1, [Score=435, Expect=8e-146]} {RNA1509_26315} {RNA1310_7806, RNA1509_26315} {RNA1509_26315, RNA815_21086}
25. MligTC455_24384 1090 22.71 Mlig455_012512, Mlig455_012598

Neo: -

Age: -

Region-enriched R7: 3.344/0.00000

Regeneration-downregulated BL: -2.703

Regeneration-depleted BL: -2.703

 CPNE8 0.955 - - 0.955 - - -

Mlig455_012512 {REF} {Length: 3415} {Pfam: Copine [PF07002.18, score=240.3]; C2 domain [PF00168.32, score=47.4]; vWA found in TerF C terminus [PF10138.11, score=20.9]} {Human: ENSG00000139117, CPNE8, copine 8, [Score=405, Expect=3e-133]; ENSG00000144550, CPNE9, copine family member 9, [Score=402, Expect=6e-132]; ENSG00000124772, CPNE5, copine 5, [Score=394, Expect=2e-128]} {Mouse: ENSMUSG00000030270, Cpne9, copine family member IX, [Score=408, Expect=2e-134]; ENSMUSG00000052560, Cpne8, copine VIII, [Score=404, Expect=7e-133]; ENSMUSG00000024008, Cpne5, copine V, [Score=393, Expect=4e-128]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=297, Expect=3e-91]} {Smed: dd_Smed_v6_13873_0_1, dd_Smed_v6_13873_0_1, [Score=542, Expect=0.0]} {RNA1509_11237, RNA1509_41315} {RNA1310_10456.2, RNA1509_11237, RNA1509_41315} {RNA1509_11237, RNA1509_41315, RNA815_15820.1}

Mlig455_012598 {REF} {Length: 3852} {Pfam: Copine [PF07002.18, score=243.3]; C2 domain [PF00168.32, score=50.6]; vWA found in TerF C terminus [PF10138.11, score=24.1]} {Human: ENSG00000139117, CPNE8, copine 8, [Score=402, Expect=1e-132]; ENSG00000144550, CPNE9, copine family member 9, [Score=397, Expect=6e-131]; ENSG00000124772, CPNE5, copine 5, [Score=389, Expect=5e-127]; ENSG00000140848, CPNE2, copine 2, [Score=386, Expect=2e-126]} {Mouse: ENSMUSG00000030270, Cpne9, copine family member IX, [Score=404, Expect=2e-133]; ENSMUSG00000052560, Cpne8, copine VIII, [Score=401, Expect=3e-132]; ENSMUSG00000024008, Cpne5, copine V, [Score=387, Expect=2e-126]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=296, Expect=3e-91]} {Smed: dd_Smed_v6_13873_0_1, dd_Smed_v6_13873_0_1, [Score=545, Expect=0.0]} {RNA1509_11237} {RNA1310_10456.1} {RNA815_15820.1}
26. MligTC455_43932 60 1.25 Mlig455_005368, Mlig455_005496

Neo: -

Age: -

Region-enriched R3: 3.738/0.03222

Regeneration-upregulated R2: 5.555

Regeneration-enriched R2: 5.555

 CDA 0.955 - - - 0.955 - -

Mlig455_005368 {REF} {Length: 2584} {Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region [PF00383.25, score=51.5]; Cytidine and deoxycytidylate deaminase zinc-binding region [PF08211.14, score=41.0]} {Human: ENSG00000158825, CDA, cytidine deaminase, [Score=99.0, Expect=3e-26]} {Mouse: ENSMUSG00000028755, Cda, cytidine deaminase, [RH, Score=107, Expect=1e-29]} {Dmel: FBgn0032003, CG8349, [Score=90.9, Expect=3e-22]} {Celegans: WBGene00000391, cdd-1, Cytidine deaminase, [Score=98.2, Expect=4e-26]} {Smed: dd_Smed_v6_3308_0_1, dd_Smed_v6_3308_0_1, [Score=84.0, Expect=5e-21]} {RNA1509_38090} {RNA1310_37061} {RNA815_27264}

Mlig455_005496 {REF} {Length: 569} {Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region [PF00383.25, score=37.0]; Cytidine and deoxycytidylate deaminase zinc-binding region [PF08211.14, score=24.3]} {Human: ENSG00000158825, CDA, cytidine deaminase, [Score=63.2, Expect=8e-13]} {Mouse: ENSMUSG00000028755, Cda, cytidine deaminase, [Score=65.9, Expect=5e-14]} {Dmel: FBgn0032001, CG8360, [Score=60.5, Expect=5e-12]} {Celegans: WBGene00000392, cdd-2, Cytidine deaminase, [Score=73.2, Expect=6e-17]} {Smed: dd_Smed_v6_3308_0_1, dd_Smed_v6_3308_0_1, [Score=60.1, Expect=3e-12]} {RNA1310_37061} {RNA815_27264}
27. MligTC455_20360 45 0.94 Mlig455_020098

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_020098 {REF} {Length: 2113} {RNA1509_51474} {RNA1310_43070} {RNA815_32077}
28. MligTC455_06013 40 0.84 Mlig455_068436

Neo: -

Age: -

 0.953 - - - 0.953 - - Mlig455_068436 {REF} {Length: 578} {RNA1310_1398} {RNA815_9443}
29. MligTC455_50422 125 2.6 Mlig455_014719

Neo: -

Age: -

Region-enriched R2: 3.621/0.01085

 GALNT1 0.953 - - - - 0.953 - Mlig455_014719 {REF} {Length: 2844} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=108.6]; N-terminal domain of galactosyltransferase [PF02709.16, score=19.9]} {Human: ENSG00000141429, GALNT1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=328, Expect=8e-108]; ENSG00000144278, GALNT13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=320, Expect=1e-102]} {Mouse: ENSMUSG00000000420, Galnt1, polypeptide N-acetylgalactosaminyltransferase 1, [Score=328, Expect=7e-106]; ENSMUSG00000060988, Galnt13, polypeptide N-acetylgalactosaminyltransferase 13, [Score=320, Expect=9e-103]} {Dmel: FBgn0050463, CG30463, [Score=349, Expect=3e-113]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [Score=359, Expect=2e-117]} {Smed: dd_Smed_v6_4615_0_1, dd_Smed_v6_4615_0_1, [Score=379, Expect=3e-125]} {RNA1509_29632} {RNA1310_10752} {RNA815_14192.1}
30. MligTC455_51993 138 2.87 Mlig455_011140

Neo: -

Age: -

Region-enriched R7: 5.345/0.00000
Region-enriched R6: 3.181/0.00480

 0.953 - - - - 0.953 - Mlig455_011140 {REF} {Length: 1829} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [Score=63.2, Expect=5e-12]} {RNA1509_41080} {RNA1310_48966} {RNA815_1736.1}
31. MligTC455_11146 70 1.46 Mlig455_068743

Neo: -

Age: Down-Up-Down

 C11orf65 0.952 - - 0.952 - - - Mlig455_068743 {REF} {Length: 1750} {Human: ENSG00000166323, C11orf65, chromosome 11 open reading frame 65, [RH, Score=226, Expect=4e-72]} {Mouse: ENSMUSG00000005131, 4930550C14Rik, RIKEN cDNA 4930550C14 gene, [RH, Score=214, Expect=2e-67]} {Smed: dd_Smed_v6_13591_0_1, dd_Smed_v6_13591_0_1, [RH, Score=237, Expect=9e-77]} {RNA1310_22540.1} {RNA815_13464}
32. MligTC455_39202 47 0.99 Mlig455_010593

Neo: -

Age: Down-Up-Down

Region-enriched R2: 5.010/0.00677
Region-enriched R7: 4.029/0.03663

 CALM2 0.95 - - - - 0.950 - Mlig455_010593 {REF} {Length: 1658} {Pfam: EF hand [PF00036.34, score=125.1]; EF-hand domain pair [PF13499.8, score=116.7]; EF-hand domain pair [PF13833.8, score=96.2]; EF-hand domain [PF13405.8, score=93.9]; EF hand [PF13202.8, score=88.5]; EF-hand domain [PF14658.8, score=36.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=31.9]; Tellurite resistance protein TerB [PF05099.15, score=30.3]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.7]; Caleosin related protein [PF05042.15, score=24.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=200, Expect=5e-65]; ENSG00000160014, CALM3, calmodulin 3, [Score=198, Expect=8e-65]; ENSG00000198668, CALM1, calmodulin 1, [Score=198, Expect=7e-65]; ENSG00000178363, CALML3, calmodulin like 3, [Score=190, Expect=1e-61]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=203, Expect=3e-66]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=198, Expect=5e-65]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=198, Expect=5e-65]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=199, Expect=3e-65]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=199, Expect=2e-65]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=199, Expect=2e-65]} {RNA1509_58569} {RNA1310_33205} {RNA815_15087}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA