TomoSeq data search

Data search

Results for MligTC455_30923

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30923	161	3.34	Mlig455_042809	Neo: - Age: Up-Down-Up	PACS2	Mlig455_042809 {REF} {Length: 2540} {Pfam: PACS-1 cytosolic sorting protein [PF10254.11, score=204.8]} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [Score=130, Expect=3e-32]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [Score=122, Expect=6e-30]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [RH, Score=132, Expect=3e-33]} {Celegans: WBGene00044077, tag-232, [RH, Score=77.8, Expect=1e-15]} {Smed: dd_Smed_v6_5300_0_1, dd_Smed_v6_5300_0_1, [Score=123, Expect=2e-30]} {RNA1509_39289} {RNA1310_9373.2} {RNA815_20289.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30923

161

3.34

Mlig455_042809

Neo: -

Age: Up-Down-Up

PACS2

Mlig455_042809 {REF} {Length: 2540} {Pfam: PACS-1 cytosolic sorting protein [PF10254.11, score=204.8]} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [Score=130, Expect=3e-32]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [Score=122, Expect=6e-30]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [RH, Score=132, Expect=3e-33]} {Celegans: WBGene00044077, tag-232, [RH, Score=77.8, Expect=1e-15]} {Smed: dd_Smed_v6_5300_0_1, dd_Smed_v6_5300_0_1, [Score=123, Expect=2e-30]} {RNA1509_39289} {RNA1310_9373.2} {RNA815_20289.1}

Cumulative graph for MligTC455_30923

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.128	2.463	0.95172	1.00000
RegionR2	0.028	2.463	0.97214	1.00000
RegionR3	-0.23	2.463	0.72858	1.00000
RegionR4	1.262	2.463	0.07435	0.25215
RegionR5	0.499	2.463	0.36726	0.72000
RegionR6	-0.015	2.463	0.98497	1.00000
RegionR7	-0.234	2.463	0.80115	1.00000
RegionR8	-1.181	2.463	0.36875	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.923	2.463	0.41698	1.00000
RegenerationR2	0.367	2.463	0.47473	0.86029
RegenerationR3	0.581	2.463	0.36251	0.77839
RegenerationR4	-0.916	2.463	0.16312	0.59678
RegenerationR5	0.424	2.463	0.42438	0.81405
RegenerationR6	-0.315	2.463	0.65460	0.90060
RegenerationBL	-0.627	2.463	0.58550	0.93650
RegenerationTP	-0.11	2.463	0.92526	1.00000

Genes with expression patterns similar to MligTC455_30923

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30923	161	3.34	Mlig455_042809	Neo: - Age: Up-Down-Up	PACS2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042809 {REF} {Length: 2540} {Pfam: PACS-1 cytosolic sorting protein [PF10254.11, score=204.8]} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [Score=130, Expect=3e-32]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [Score=122, Expect=6e-30]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [RH, Score=132, Expect=3e-33]} {Celegans: WBGene00044077, tag-232, [RH, Score=77.8, Expect=1e-15]} {Smed: dd_Smed_v6_5300_0_1, dd_Smed_v6_5300_0_1, [Score=123, Expect=2e-30]} {RNA1509_39289} {RNA1310_9373.2} {RNA815_20289.1}
2.	MligTC455_51387	301	6.27	Mlig455_041337, Mlig455_056224	Neo: Irradiation Age: Up-Down-Down		0.969	-	-	-	-	0.969	-	Mlig455_041337 {REF} {Length: 3729} {TRANSSPLICED} {RNA1509_34326, RNA1509_54833} {RNA1310_25018.1, RNA1509_34326, RNA1509_54833} {RNA1509_34326, RNA1509_54833, RNA815_29663} Mlig455_056224 {REF} {Length: 3928} {TRANSSPLICED} {RNA1509_34326} {RNA1310_25018.1} {RNA815_29663}
3.	MligTC455_24044	321	6.69	Mlig455_042095	Neo: - Age: logFC(26M/2M)=0.284	RAB11A	0.954	-	-	-	-	0.954	-	Mlig455_042095 {REF} {Length: 2333} {Pfam: Ras family [PF00071.24, score=185.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=112.7]; ADP-ribosylation factor family [PF00025.23, score=44.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.9]; Signal recognition particle receptor beta subunit [PF09439.12, score=21.9]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=20.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.9]} {Human: ENSG00000103769, RAB11A, RAB11A, member RAS oncogene family, [Score=213, Expect=2e-69]; ENSG00000185236, RAB11B, RAB11B, member RAS oncogene family, [Score=206, Expect=7e-67]} {Mouse: ENSMUSG00000004771, Rab11a, RAB11A, member RAS oncogene family, [Score=213, Expect=1e-69]; ENSMUSG00000077450, Rab11b, RAB11B, member RAS oncogene family, [Score=206, Expect=4e-67]} {Dmel: FBgn0015790, Rab11, [Score=213, Expect=5e-70]} {Celegans: WBGene00004274, rab-11.1, Ras-related protein rab-11.1, [Score=209, Expect=2e-68]} {Smed: dd_Smed_v6_867_0_1, dd_Smed_v6_867_0_1, [Score=200, Expect=7e-65]} {RNA1509_31963, RNA1509_52120} {RNA1310_28163, RNA1509_31963, RNA1509_52120} {RNA1509_31963, RNA1509_52120, RNA815_20566}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_30923

161

3.34

Mlig455_042809

Neo: -

Age: Up-Down-Up

PACS2

1.000

MligTC455_51387

301

6.27

Mlig455_041337, Mlig455_056224

Neo: Irradiation

Age: Up-Down-Down

0.969

Mlig455_041337 {REF} {Length: 3729} {TRANSSPLICED} {RNA1509_34326, RNA1509_54833} {RNA1310_25018.1, RNA1509_34326, RNA1509_54833} {RNA1509_34326, RNA1509_54833, RNA815_29663}

Mlig455_056224 {REF} {Length: 3928} {TRANSSPLICED} {RNA1509_34326} {RNA1310_25018.1} {RNA815_29663}

MligTC455_24044

321

6.69

Mlig455_042095

Neo: -

Age: logFC(26M/2M)=0.284

RAB11A

0.954

Mlig455_042095 {REF} {Length: 2333} {Pfam: Ras family [PF00071.24, score=185.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=112.7]; ADP-ribosylation factor family [PF00025.23, score=44.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.9]; Signal recognition particle receptor beta subunit [PF09439.12, score=21.9]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=20.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.9]} {Human: ENSG00000103769, RAB11A, RAB11A, member RAS oncogene family, [Score=213, Expect=2e-69]; ENSG00000185236, RAB11B, RAB11B, member RAS oncogene family, [Score=206, Expect=7e-67]} {Mouse: ENSMUSG00000004771, Rab11a, RAB11A, member RAS oncogene family, [Score=213, Expect=1e-69]; ENSMUSG00000077450, Rab11b, RAB11B, member RAS oncogene family, [Score=206, Expect=4e-67]} {Dmel: FBgn0015790, Rab11, [Score=213, Expect=5e-70]} {Celegans: WBGene00004274, rab-11.1, Ras-related protein rab-11.1, [Score=209, Expect=2e-68]} {Smed: dd_Smed_v6_867_0_1, dd_Smed_v6_867_0_1, [Score=200, Expect=7e-65]} {RNA1509_31963, RNA1509_52120} {RNA1310_28163, RNA1509_31963, RNA1509_52120} {RNA1509_31963, RNA1509_52120, RNA815_20566}