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Results for MligTC455_31009

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31009 192 4.01 Mlig455_068218

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.229

 PKDREJ Mlig455_068218 {REF} {Length: 27415} {Pfam: Polycystin cation channel [PF08016.14, score=221.6]; REJ domain [PF02010.17, score=190.1]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=79.4]; Lectin C-type domain [PF00059.23, score=77.4]; F5/8 type C domain [PF00754.27, score=74.2]; Kringle domain [PF00051.20, score=46.7]; PLAT/LH2 domain [PF01477.25, score=45.9]; Ion transport protein [PF00520.33, score=36.0]; PKD domain [PF00801.22, score=29.8]; PKD domain [PF18911.2, score=22.5]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=192, Expect=2e-47]} {Mouse: ENSMUSG00000048827, Pkd1l3, polycystic kidney disease 1 like 3, [RH, Score=238, Expect=2e-61]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=127, Expect=2e-28]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=123, Expect=7e-27]} {Smed: dd_Smed_v6_15525_0_1, dd_Smed_v6_15525_0_1, [Score=332, Expect=4e-90]} {RNA1509_1972} {RNA1310_4.1} {RNA815_12}

Cumulative graph for MligTC455_31009

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.639 2.48 0.34192 0.98625
RegionR2 1.045 2.48 0.30960 0.70052
RegionR3 -0.162 2.48 0.89975 1.00000
RegionR4 0.488 2.48 0.63420 0.94172
RegionR5 -0.576 2.48 0.96440 1.00000
RegionR6 0.281 2.48 0.73257 1.00000
RegionR7 1.1 2.48 0.31984 0.95467
RegionR8 2.462 2.48 0.01908 0.26817

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.738 2.48 0.99991 1.00000
RegenerationR2 0.409 2.48 0.44540 0.84351
RegenerationR3 0.29 2.48 0.69821 0.94697
RegenerationR4 -0.712 2.48 0.34110 0.77236
RegenerationR5 0.397 2.48 0.57859 0.89976
RegenerationR6 0.077 2.48 0.91883 1.00000
RegenerationBL 0.346 2.48 0.63844 0.97744
RegenerationTP -0.317 2.48 0.68796 1.00000


Genes with expression patterns similar to MligTC455_31009

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31009 192 4.01 Mlig455_068218

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.229

 PKDREJ 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_068218 {REF} {Length: 27415} {Pfam: Polycystin cation channel [PF08016.14, score=221.6]; REJ domain [PF02010.17, score=190.1]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=79.4]; Lectin C-type domain [PF00059.23, score=77.4]; F5/8 type C domain [PF00754.27, score=74.2]; Kringle domain [PF00051.20, score=46.7]; PLAT/LH2 domain [PF01477.25, score=45.9]; Ion transport protein [PF00520.33, score=36.0]; PKD domain [PF00801.22, score=29.8]; PKD domain [PF18911.2, score=22.5]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=192, Expect=2e-47]} {Mouse: ENSMUSG00000048827, Pkd1l3, polycystic kidney disease 1 like 3, [RH, Score=238, Expect=2e-61]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=127, Expect=2e-28]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=123, Expect=7e-27]} {Smed: dd_Smed_v6_15525_0_1, dd_Smed_v6_15525_0_1, [Score=332, Expect=4e-90]} {RNA1509_1972} {RNA1310_4.1} {RNA815_12}
2. MligTC455_31008 160 3.33 Mlig455_046319

Neo: -

Age: logFC(26M/2M)=0.959

 4.281 0.998 0.889 - 0.733 0.750 0.911 Mlig455_046319 {REF} {Length: 2259} {Pfam: Polycystin cation channel [PF08016.14, score=35.1]; Ion transport protein [PF00520.33, score=20.2]} {Smed: dd_Smed_v6_12955_0_1, dd_Smed_v6_12955_0_1, [Score=54.7, Expect=4e-09]} {RNA1509_24715, RNA1509_50930} {RNA1310_4.1, RNA1509_50930} {RNA1509_50930, RNA815_12}
3. MligTC455_46583 1098 22.87 Mlig455_067509

Neo: -

Age: logFC(26M/2M)=-0.318

Region-enriched R8: 2.830/0.00000
Region-enriched R7: 1.613/0.00085

Regeneration-depleted TP: -3.677
Regeneration-depleted BL: -2.763
Regeneration-depleted R4: -2.132
Regeneration-depleted R2: -1.934

 1.772 - - - - 0.817 0.955 Mlig455_067509 {REF} {Length: 1536} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=25.3]} {Dmel: FBgn0051221, CG31221, [Score=62.8, Expect=5e-12]} {Celegans: WBGene00010290, F58H1.7, [RH, Score=66.6, Expect=1e-13]} {Smed: dd_Smed_v6_2598_0_1, dd_Smed_v6_2598_0_1, [RH, Score=173, Expect=3e-55]} {RNA1509_59060} {RNA1310_28256} {RNA815_15141.1}
4. MligTC455_02588 124 2.59 Mlig455_027269

Neo: -

Age: -

Region-enriched R8: 3.886/0.02772

 MX2 1.748 0.793 - - - - 0.955 Mlig455_027269 {REF} {Length: 3110} {Pfam: Dynamin central region [PF01031.22, score=151.0]; Dynamin family [PF00350.25, score=125.4]; Dynamin GTPase effector domain [PF02212.20, score=54.8]; 50S ribosome-binding GTPase [PF01926.25, score=24.2]; AAA ATPase domain [PF13175.8, score=21.4]; Family with sequence similarity 184, A and B [PF15665.7, score=18.9]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [RH, Score=347, Expect=1e-108]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [RH, Score=334, Expect=1e-104]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [RH, Score=343, Expect=3e-108]} {Dmel: FBgn0003392, shi, shibire, [Score=153, Expect=2e-38]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=164, Expect=4e-42]} {Smed: dd_Smed_v6_1818_0_1, dd_Smed_v6_1818_0_1, [Score=165, Expect=4e-43]} {RNA1509_19894} {RNA1310_7243} {RNA815_3194}
5. MligTC455_25275 1715 35.72 Mlig455_019917, Mlig455_047956

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.329

 TNK2 1.724 - - - - 0.962 0.762

Mlig455_019917 {REF} {Length: 2556} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [Score=57.4, Expect=1e-08]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [Score=68.9, Expect=1e-12]} {RNA1509_19552} {RNA1310_19697} {RNA815_23068}

Mlig455_047956 {REF} {Length: 1762} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [Score=57.4, Expect=1e-08]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [Score=69.3, Expect=7e-13]} {RNA1509_19552} {RNA1310_19697, RNA1509_19552} {RNA1509_19552, RNA815_23068}
6. MligTC455_40424 474 9.88 Mlig455_029322

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.888

 CALM2 0.974 - - - - 0.974 - Mlig455_029322 {REF} {Length: 1020} {Pfam: EF-hand domain pair [PF13833.8, score=26.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=69.7, Expect=2e-14]; ENSG00000160014, CALM3, calmodulin 3, [Score=68.9, Expect=2e-14]; ENSG00000198668, CALM1, calmodulin 1, [Score=68.9, Expect=2e-14]; ENSG00000178363, CALML3, calmodulin like 3, [Score=68.2, Expect=3e-14]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=70.5, Expect=1e-14]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=68.9, Expect=1e-14]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=68.9, Expect=1e-14]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=67.4, Expect=3e-14]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=67.8, Expect=2e-14]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=67.8, Expect=2e-14]} {RNA1509_16604} {RNA1310_33121} {RNA815_17390}
7. MligTC455_38387 155 3.23 Mlig455_051948

Neo: -

Age: -

Region-enriched R8: 3.478/0.04404

 RAC1 0.963 - - - - 0.963 - Mlig455_051948 {REF} {Length: 3895} {Pfam: Ras family [PF00071.24, score=174.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.2]; ADP-ribosylation factor family [PF00025.23, score=35.6]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=223, Expect=5e-74]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=219, Expect=2e-72]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=217, Expect=2e-71]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=215, Expect=1e-70]; ENSG00000070831, CDC42, cell division cycle 42, [Score=215, Expect=1e-70]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=223, Expect=3e-74]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=219, Expect=1e-72]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=216, Expect=4e-71]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=215, Expect=8e-71]} {Dmel: FBgn0010333, Rac1, [Score=224, Expect=1e-74]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=224, Expect=5e-75]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=209, Expect=4e-69]} {RNA1509_22651} {RNA1310_24166.1} {RNA815_17420}
8. MligTC455_42967 296 6.17 Mlig455_002749, Mlig455_011489

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.077

 0.961 - - - - - 0.961

Mlig455_002749 {REF} {Length: 1700} {RNA1509_21752} {RNA1310_30402.1} {RNA815_26388}

Mlig455_011489 {REF} {Length: 1762} {RNA1509_21752, RNA1509_6543} {RNA1310_30402.1, RNA1509_6543} {RNA1509_6543, RNA815_26388}

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