Data search
Results for MligTC455_31037
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31037 | 494 | 10.29 | Mlig455_063532 | Neo: - Age: - |
LMBR1L | Mlig455_063532 {REF} {Length: 4212} {TRANSSPLICED} {Pfam: LMBR1-like membrane protein [PF04791.18, score=166.3]} {Human: ENSG00000139636, LMBR1L, limb development membrane protein 1 like, [RH, Score=235, Expect=6e-71]} {Mouse: ENSMUSG00000022999, Lmbr1l, limb region 1 like, [RH, Score=231, Expect=1e-69]} {Dmel: FBgn0027539, lili, lilipod, [RH, Score=214, Expect=4e-63]} {Celegans: WBGene00019877, R05D3.2, LIMR family protein R05D3.2, [RH, Score=115, Expect=6e-27]} {Smed: dd_Smed_v6_9923_0_1, dd_Smed_v6_9923_0_1, [RH, Score=182, Expect=1e-51]} {RNA1509_31263, RNA1509_39501, RNA1509_44255} {RNA1310_15146, RNA1509_31263, RNA1509_39501, RNA1509_44255} {RNA1509_31263, RNA1509_39501, RNA1509_44255, RNA815_6922} |
Cumulative graph for MligTC455_31037
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.168 | 3.774 | 0.88764 | 1.00000 | |
| RegionR2 | -0.02 | 3.774 | 0.96825 | 1.00000 | |
| RegionR3 | 0.11 | 3.774 | 0.78410 | 1.00000 | |
| RegionR4 | -0.22 | 3.774 | 0.66227 | 0.96145 | |
| RegionR5 | 0.293 | 3.774 | 0.40992 | 0.76876 | |
| RegionR6 | 0.086 | 3.774 | 0.83024 | 1.00000 | |
| RegionR7 | 0.054 | 3.774 | 0.92032 | 1.00000 | |
| RegionR8 | -0.135 | 3.774 | 0.84484 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.496 | 3.774 | 0.78811 | 1.00000 | |
| RegenerationR2 | -0.5 | 3.774 | 0.27182 | 0.71735 | |
| RegenerationR3 | -0.519 | 3.774 | 0.26954 | 0.70368 | |
| RegenerationR4 | -0.324 | 3.774 | 0.50680 | 0.87303 | |
| RegenerationR5 | -0.468 | 3.774 | 0.26943 | 0.70105 | |
| RegenerationR6 | -0.816 | 3.774 | 0.10201 | 0.39539 | |
| RegenerationBL | 0.301 | 3.774 | 0.59852 | 0.94632 | |
| RegenerationTP | 0.295 | 3.774 | 0.63124 | 0.97813 |
Genes with expression patterns similar to MligTC455_31037
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31037 | 494 | 10.29 | Mlig455_063532 | Neo: - Age: - |
LMBR1L | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_063532 {REF} {Length: 4212} {TRANSSPLICED} {Pfam: LMBR1-like membrane protein [PF04791.18, score=166.3]} {Human: ENSG00000139636, LMBR1L, limb development membrane protein 1 like, [RH, Score=235, Expect=6e-71]} {Mouse: ENSMUSG00000022999, Lmbr1l, limb region 1 like, [RH, Score=231, Expect=1e-69]} {Dmel: FBgn0027539, lili, lilipod, [RH, Score=214, Expect=4e-63]} {Celegans: WBGene00019877, R05D3.2, LIMR family protein R05D3.2, [RH, Score=115, Expect=6e-27]} {Smed: dd_Smed_v6_9923_0_1, dd_Smed_v6_9923_0_1, [RH, Score=182, Expect=1e-51]} {RNA1509_31263, RNA1509_39501, RNA1509_44255} {RNA1310_15146, RNA1509_31263, RNA1509_39501, RNA1509_44255} {RNA1509_31263, RNA1509_39501, RNA1509_44255, RNA815_6922} |
| 2. | MligTC455_23260 | 367 | 7.64 | Mlig455_048753 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R5: 2.722/0.00477 |
MCPH1 | 0.965 | - | - | 0.965 | - | - | - | Mlig455_048753 {REF} {Length: 5462} {TRANSSPLICED} {Pfam: BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=49.9]; twin BRCT domain [PF12738.9, score=38.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=35.9]; BRCA1 C Terminus (BRCT) domain [PF18428.3, score=22.5]} {Human: ENSG00000285262, MCPH1, microcephalin 1, [RH, Score=59.7, Expect=2e-08]; ENSG00000147316, MCPH1, microcephalin 1, [RH, Score=59.7, Expect=2e-08]} {Mouse: ENSMUSG00000039842, Mcph1, microcephaly, primary autosomal recessive 1, [RH, Score=56.2, Expect=2e-07]} {Dmel: FBgn0260959, MCPH1, Microcephalin, [RH, Score=71.6, Expect=3e-12]} {Smed: dd_Smed_v6_14029_0_1, dd_Smed_v6_14029_0_1, [RH, Score=99.4, Expect=6e-21]} {RNA1509_8517} {RNA1310_2320.1, RNA1509_8517} {RNA1509_8517, RNA815_744} |
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