Data search
Results for MligTC455_31110
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31110 | 1807 | 37.65 | Mlig455_058567 | Neo: - Age: - |
PRKACA | Mlig455_058567 {REF} {Length: 2617} {Pfam: Protein kinase domain [PF00069.27, score=241.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.8]; Kinase-like [PF14531.8, score=28.7]} {Human: ENSG00000072062, PRKACA, protein kinase cAMP-activated catalytic subunit alpha, [RH, Score=600, Expect=0.0]; ENSG00000142875, PRKACB, protein kinase cAMP-activated catalytic subunit beta, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000005469, Prkaca, protein kinase, cAMP dependent, catalytic, alpha, [RH, Score=602, Expect=0.0]; ENSMUSG00000005034, Prkacb, protein kinase, cAMP dependent, catalytic, beta, [RH, Score=584, Expect=0.0]} {Dmel: FBgn0000273, Pka-C1, Protein kinase, cAMP-dependent, catalytic subunit 1, [RH, Score=598, Expect=0.0]} {Celegans: WBGene00002189, kin-1, cAMP-dependent protein kinase catalytic subunit, [RH, Score=603, Expect=0.0]} {Smed: dd_Smed_v6_2413_0_1, dd_Smed_v6_2413_0_1, [RH, Score=626, Expect=0.0]} {RNA1509_30559, RNA1509_44811, RNA1509_45148, RNA1509_50605} {RNA1310_8355.2, RNA1509_44811, RNA1509_45148, RNA1509_50605} {RNA1509_44811, RNA1509_45148, RNA1509_50605, RNA815_2946.1} |
Cumulative graph for MligTC455_31110
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.29 | 5.39 | 0.70387 | 1.00000 | |
| RegionR2 | 0.556 | 5.39 | 0.04498 | 0.24958 | |
| RegionR3 | 0.206 | 5.39 | 0.36316 | 0.89886 | |
| RegionR4 | 0.044 | 5.39 | 0.87466 | 1.00000 | |
| RegionR5 | -0.347 | 5.39 | 0.12474 | 0.35557 | |
| RegionR6 | -0.113 | 5.39 | 0.64447 | 1.00000 | |
| RegionR7 | -0.474 | 5.39 | 0.17025 | 0.75950 | |
| RegionR8 | 0.418 | 5.39 | 0.27035 | 0.89350 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.586 | 5.39 | 0.53356 | 1.00000 | |
| RegenerationR2 | 0.033 | 5.39 | 0.88158 | 1.00000 | |
| RegenerationR3 | -0.134 | 5.39 | 0.59793 | 0.90736 | |
| RegenerationR4 | -0.057 | 5.39 | 0.82885 | 0.99723 | |
| RegenerationR5 | 0.379 | 5.39 | 0.12389 | 0.52636 | |
| RegenerationR6 | 0.022 | 5.39 | 0.93363 | 1.00000 | |
| RegenerationBL | 0.293 | 5.39 | 0.34742 | 0.71475 | |
| RegenerationTP | 0.025 | 5.39 | 0.94379 | 1.00000 |
Genes with expression patterns similar to MligTC455_31110
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31110 | 1807 | 37.65 | Mlig455_058567 | Neo: - Age: - |
PRKACA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_058567 {REF} {Length: 2617} {Pfam: Protein kinase domain [PF00069.27, score=241.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.8]; Kinase-like [PF14531.8, score=28.7]} {Human: ENSG00000072062, PRKACA, protein kinase cAMP-activated catalytic subunit alpha, [RH, Score=600, Expect=0.0]; ENSG00000142875, PRKACB, protein kinase cAMP-activated catalytic subunit beta, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000005469, Prkaca, protein kinase, cAMP dependent, catalytic, alpha, [RH, Score=602, Expect=0.0]; ENSMUSG00000005034, Prkacb, protein kinase, cAMP dependent, catalytic, beta, [RH, Score=584, Expect=0.0]} {Dmel: FBgn0000273, Pka-C1, Protein kinase, cAMP-dependent, catalytic subunit 1, [RH, Score=598, Expect=0.0]} {Celegans: WBGene00002189, kin-1, cAMP-dependent protein kinase catalytic subunit, [RH, Score=603, Expect=0.0]} {Smed: dd_Smed_v6_2413_0_1, dd_Smed_v6_2413_0_1, [RH, Score=626, Expect=0.0]} {RNA1509_30559, RNA1509_44811, RNA1509_45148, RNA1509_50605} {RNA1310_8355.2, RNA1509_44811, RNA1509_45148, RNA1509_50605} {RNA1509_44811, RNA1509_45148, RNA1509_50605, RNA815_2946.1} |
| 2. | MligTC455_28447 | 1671 | 34.81 | Mlig455_066308 | Neo: - Age: Down-Up-Down |
0.956 | - | - | - | 0.956 | - | - | Mlig455_066308 {REF} {Length: 1281} {Pfam: Domain of unknown function (DUF4515) [PF14988.8, score=104.5]} {Mouse: ENSMUSG00000098176, Ccdc166, coiled-coil domain containing 166, [RH, Score=107, Expect=4e-26]} {Smed: dd_Smed_v6_13384_0_1, dd_Smed_v6_13384_0_1, [RH, Score=124, Expect=2e-33]} {RNA1509_33127} {RNA1310_32791.1, RNA1509_33127} {RNA1509_33127, RNA815_15652} | |
| 3. | MligTC455_21293 | 1877 | 39.1 | Mlig455_011317 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_011317 {REF} {Length: 2068} {TRANSSPLICED} {RNA1509_23516, RNA1509_25439, RNA1509_36011, RNA1509_4488} {RNA1310_27726.1, RNA1509_23516, RNA1509_25439, RNA1509_36011, RNA1509_4488} {RNA1509_23516, RNA1509_25439, RNA1509_36011, RNA1509_4488, RNA815_4709} | |
| 4. | MligTC455_26748 | 920 | 19.16 | Mlig455_016462 | Neo: - Age: logFC(26M/2M)=0.745 |
CCNL2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_016462 {REF} {Length: 2954} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=42.8]} {Human: ENSG00000221978, CCNL2, cyclin L2, [RH, Score=324, Expect=2e-104]} {Mouse: ENSMUSG00000027829, Ccnl1, cyclin L1, [RH, Score=303, Expect=3e-96]} {Dmel: FBgn0040394, CG16903, [RH, Score=303, Expect=4e-96]} {Celegans: WBGene00000876, cyl-1, CYclin L; Cyclin L, [RH, Score=234, Expect=8e-71]} {Smed: dd_Smed_v6_1900_0_7, dd_Smed_v6_1900_0_7, [RH, Score=265, Expect=7e-83]} {RNA1509_47826} {RNA1310_1853} {RNA815_21972} |
| 5. | MligTC455_49806 | 1837 | 38.28 | Mlig455_014409 | Neo: - Age: - |
RAC3 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_014409 {REF} {Length: 1644} {Pfam: Ras family [PF00071.24, score=146.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=78.3]; ADP-ribosylation factor family [PF00025.23, score=44.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.5]} {Human: ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=140, Expect=2e-41]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=138, Expect=5e-41]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=137, Expect=1e-40]; ENSG00000070831, CDC42, cell division cycle 42, [Score=137, Expect=1e-40]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=135, Expect=2e-39]; ENSG00000177105, RHOG, ras homolog family member G, [Score=135, Expect=1e-39]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=135, Expect=1e-39]} {Mouse: ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=140, Expect=1e-41]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=138, Expect=3e-41]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=137, Expect=9e-41]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=135, Expect=7e-40]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=134, Expect=2e-39]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=134, Expect=1e-39]} {Dmel: FBgn0010333, Rac1, [Score=138, Expect=4e-41]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=145, Expect=6e-44]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=138, Expect=2e-41]} {RNA1509_14417, RNA1509_15579, RNA1509_32277} {RNA1310_34688.1, RNA1509_14417, RNA1509_15579, RNA1509_32277} {RNA1509_14417, RNA1509_15579, RNA1509_32277, RNA815_20638} |
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