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Results for MligTC455_31229

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31229 47 0.97 Mlig455_042853

Neo: -

Age: -

 Mlig455_042853 {REF} {Length: 1420} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=21.6]} {RNA1509_33950} {RNA1310_436.1, RNA1509_33950} {RNA1509_33950, RNA815_10211.1}

Cumulative graph for MligTC455_31229

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.07 1.331 1.00000 1.00000
RegionR2 2.035 1.331 0.25624 0.63673
RegionR3 1.074 1.331 0.52995 1.00000
RegionR4 0.984 1.331 0.23772 0.53286
RegionR5 -0.183 1.331 1.00000 1.00000
RegionR6 -0.905 1.331 0.91280 1.00000
RegionR7 -1.235 1.331 1.00000 1.00000
RegionR8 -0.7 1.331 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.082 1.331 0.87111 1.00000
RegenerationR2 0.642 1.331 0.56726 0.90134
RegenerationR3 1.686 1.331 0.31621 0.74569
RegenerationR4 1.143 1.331 0.38886 0.80662
RegenerationR5 2.642 1.331 0.04530 0.34766
RegenerationR6 3.289 1.331 0.06506 0.32045
RegenerationBL 2.347 1.331 0.27254 0.63244
RegenerationTP 3.986 1.331 0.14892 0.57301


Genes with expression patterns similar to MligTC455_31229

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31229 47 0.97 Mlig455_042853

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_042853 {REF} {Length: 1420} {Pfam: Protein of unknown function (DUF1104) [PF06518.13, score=21.6]} {RNA1509_33950} {RNA1310_436.1, RNA1509_33950} {RNA1509_33950, RNA815_10211.1}
2. MligTC455_35990 62 1.29 Mlig455_069125

Neo: -

Age: Up-Down-Down

Region-enriched R4: 4.550/0.00866

 0.976 - - - - 0.976 - Mlig455_069125 {REF} {Length: 5594} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=33.4]; Reverse transcriptase-like [PF13456.8, score=30.9]} {Smed: dd_Smed_v6_17076_0_2, dd_Smed_v6_17076_0_2, [Score=181, Expect=6e-51]} {RNA1509_47541} {RNA1310_49685} {RNA815_36641}
3. MligTC455_27855 104 2.17 Mlig455_060054

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_060054 {REF} {Length: 828} {Pfam: Zinc knuckle [PF00098.25, score=20.6]} {RNA1509_40897} {RNA1310_131.1} {RNA815_52.1}
4. MligTC455_49474 238 4.95 Mlig455_060127

Neo: -

Age: -

 STUB1 0.967 - - - - 0.967 - Mlig455_060127 {REF} {Length: 1907} {TRANSSPLICED} {Pfam: U-box domain [PF04564.17, score=93.3]; CHIP N-terminal tetratricopeptide repeat domain [PF18391.3, score=71.2]; Tetratricopeptide repeat [PF00515.30, score=54.4]; Tetratricopeptide repeat [PF07719.19, score=51.7]; Tetratricopeptide repeat [PF13424.8, score=39.1]; TPR repeat [PF13414.8, score=36.7]; Tetratricopeptide repeat [PF13432.8, score=32.7]; Tetratricopeptide repeat [PF13181.8, score=32.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=27.4]; Tetratricopeptide repeat [PF13428.8, score=25.9]; Tetratricopeptide repeat [PF13176.8, score=25.8]; Tetratricopeptide repeat [PF13374.8, score=22.6]; Tetratricopeptide repeat [PF14559.8, score=21.9]; Tetratricopeptide repeat [PF13174.8, score=21.5]} {Human: ENSG00000103266, STUB1, STIP1 homology and U-box containing protein 1, [RH, Score=294, Expect=3e-99]} {Mouse: ENSMUSG00000039615, Stub1, STIP1 homology and U-Box containing protein 1, [RH, Score=293, Expect=7e-99]} {Dmel: FBgn0027052, STUB1, STIP1 homology and U-box containing protein 1, [RH, Score=306, Expect=3e-104]} {Celegans: WBGene00000500, chn-1, C-term of Hsp70-iNteracting protein (CHIP family); Hsp70-interacting protein, [RH, Score=215, Expect=5e-69]} {Smed: dd_Smed_v6_2121_0_1, dd_Smed_v6_2121_0_1, [RH, Score=290, Expect=4e-98]} {RNA1509_17879} {RNA1310_28517} {RNA815_11702}
5. MligTC455_28596 52 1.08 Mlig455_039629

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_039629 {REF} {Length: 1244} {Pfam: Integrase core domain [PF00665.28, score=31.2]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=2e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
6. MligTC455_32533 133 2.76 Mlig455_043284

Neo: -

Age: -

Region-enriched R4: 2.790/0.00010

 0.963 - - - - 0.963 - Mlig455_043284 {REF} {Length: 1451} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_2753} {RNA1310_8675} {RNA815_3094.1}
7. MligTC455_48598 972 20.25 Mlig455_047165, Mlig455_048517

Neo: -

Age: Down-Up-Up

 RAC1 0.963 - - - - 0.963 -

Mlig455_047165 {REF} {Length: 2607} {Pfam: Ras family [PF00071.24, score=171.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=76.0]; ADP-ribosylation factor family [PF00025.23, score=19.3]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=182, Expect=8e-57]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=180, Expect=3e-56]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=178, Expect=2e-55]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=182, Expect=6e-57]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=178, Expect=9e-56]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=178, Expect=2e-55]} {Dmel: FBgn0014380, RhoL, Rho-like, [Score=188, Expect=1e-59]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=181, Expect=8e-57]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=187, Expect=1e-59]} {RNA1509_15267} {RNA1310_21494} {RNA815_7950}

Mlig455_048517 {REF} {Length: 2513} {Pfam: Ras family [PF00071.24, score=178.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.9]; ADP-ribosylation factor family [PF00025.23, score=24.4]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=185, Expect=3e-59]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=184, Expect=7e-59]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=181, Expect=5e-58]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=185, Expect=2e-59]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=181, Expect=4e-58]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=181, Expect=4e-58]} {Dmel: FBgn0014380, RhoL, Rho-like, [Score=191, Expect=5e-62]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=184, Expect=2e-59]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=191, Expect=3e-62]} {RNA1509_15267} {RNA1310_21494, RNA1509_15267} {RNA1509_15267, RNA815_7950}
8. MligTC455_37551 79 1.64 Mlig455_056463

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_056463 {REF} {Length: 813} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}

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