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Results for MligTC455_31349

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31349 40 0.84 Mlig455_006806, Mlig455_016935, Mlig455_017888

Neo: -

Age: logFC(26M/2M)=1.015

Region-enriched R4: 3.880/0.00930

 RTL1

Mlig455_006806 {REF} {Length: 2140} {Pfam: Integrase zinc binding domain [PF17921.3, score=77.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=44.3]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=53.9, Expect=8e-07]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=91.7, Expect=5e-19]} {RNA1509_33330} {RNA1310_31521.1} {RNA815_11487}

Mlig455_016935 {REF} {Length: 2324} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=94.7]; Integrase zinc binding domain [PF17921.3, score=77.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=46.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000026333, Gin1, gypsy retrotransposon integrase 1, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=254, Expect=2e-75]} {RNA1509_33330} {RNA1310_5975.2, RNA1509_33330} {RNA1509_33330, RNA815_11487}

Mlig455_017888 {REF} {Length: 1442} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=38.3]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=93.2, Expect=5e-20]} {RNA1509_33330} {RNA1310_31521.2} {RNA815_11487}

Cumulative graph for MligTC455_31349

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 3.138 1.326 0.47806 1.00000
RegionR2 -2.411 1.326 0.14865 0.48140
RegionR3 -1.366 1.326 0.34199 0.87835
RegionR4 3.88 1.326 0.00086 0.00930
RegionR5 -0.712 1.326 0.59005 0.94797
RegionR6 -2.156 1.326 0.18766 0.75381
RegionR7 -1.527 1.326 0.53627 1.00000
RegionR8 1.154 1.326 0.56039 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.819 1.326 0.50811 1.00000
RegenerationR2 -0.129 1.326 0.90071 1.00000
RegenerationR3 1.654 1.326 0.17709 0.61232
RegenerationR4 -1.294 1.326 0.16474 0.59924
RegenerationR5 0.062 1.326 0.96200 1.00000
RegenerationR6 1.974 1.326 0.18531 0.52123
RegenerationBL 2.143 1.326 0.18270 0.51211
RegenerationTP -0.389 1.326 0.89395 1.00000


Genes with expression patterns similar to MligTC455_31349

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31349 40 0.84 Mlig455_006806, Mlig455_016935, Mlig455_017888

Neo: -

Age: logFC(26M/2M)=1.015

Region-enriched R4: 3.880/0.00930

 RTL1 4 1.000 1.000 - - 1.000 1.000

Mlig455_006806 {REF} {Length: 2140} {Pfam: Integrase zinc binding domain [PF17921.3, score=77.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=44.3]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=53.9, Expect=8e-07]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=91.7, Expect=5e-19]} {RNA1509_33330} {RNA1310_31521.1} {RNA815_11487}

Mlig455_016935 {REF} {Length: 2324} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=94.7]; Integrase zinc binding domain [PF17921.3, score=77.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=46.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000026333, Gin1, gypsy retrotransposon integrase 1, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=254, Expect=2e-75]} {RNA1509_33330} {RNA1310_5975.2, RNA1509_33330} {RNA1509_33330, RNA815_11487}

Mlig455_017888 {REF} {Length: 1442} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=38.3]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=93.2, Expect=5e-20]} {RNA1509_33330} {RNA1310_31521.2} {RNA815_11487}
2. MligTC455_19383 82 1.71 Mlig455_032414

Neo: Germline

Age: -

Region-enriched R4: 3.681/0.00002

 GABBR2 2.664 0.902 0.811 - - - 0.951 Mlig455_032414 {REF} {Length: 3517} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=167.6]; Receptor family ligand binding region [PF01094.30, score=72.5]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=303, Expect=3e-88]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=303, Expect=1e-88]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=338, Expect=1e-99]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=298, Expect=2e-87]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=159, Expect=9e-45]} {RNA1509_48457} {RNA1310_18461} {RNA815_14519}
3. MligTC455_22362 160 3.34 Mlig455_070376

Neo: -

Age: -

Region-enriched R4: 2.051/0.01352

 2.566 0.839 0.759 - - - 0.968 Mlig455_070376 {REF} {Length: 2467} {NoTransDecoderORF} {RNA1509_12100} {RNA1310_35660.1} {RNA815_14259}
4. MligTC455_19096 120 2.51 Mlig455_034495, Mlig455_066247

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.298

Region-enriched R4: 4.299/0.00004

 1.852 0.898 - - - - 0.954

Mlig455_034495 {REF} {Length: 2182} {NoTransDecoderORF} {RNA1509_28602} {RNA1310_14384, RNA1509_28602} {RNA1509_28602, RNA815_9416}

Mlig455_066247 {REF} {Length: 3738} {RNA1509_28602} {RNA1310_14384} {RNA815_9416}
5. MligTC455_34040 14 0.3 Mlig455_004364

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.318

 1.84 0.883 0.957 - - - - Mlig455_004364 {REF} {Length: 2363} {RNA1509_1097, RNA1509_21186} {RNA1310_10114.1, RNA1509_21186} {RNA1509_21186, RNA815_3296}
6. MligTC455_40841 16 0.34 Mlig455_003915, Mlig455_022710

Neo: -

Age: -

 1.769 0.811 0.958 - - - -

Mlig455_003915 {REF} {Length: 3963} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=150.6]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=62.0, Expect=1e-09]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=64.3, Expect=1e-10]} {Smed: dd_Smed_v6_9790_0_1, dd_Smed_v6_9790_0_1, [Score=196, Expect=2e-55]} {RNA1509_1108} {RNA1310_105330} {RNA815_1603}

Mlig455_022710 {REF} {Length: 2064} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=69.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=42.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=27.5]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=27.0]} {Mouse: ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=59.7, Expect=2e-09]} {Dmel: FBgn0035385, FMRFaR, FMRFamide Receptor, [Score=71.2, Expect=4e-13]} {Celegans: WBGene00018728, frpr-8, FMRFamide Peptide Receptor family, [Score=54.7, Expect=6e-08]} {Smed: dd_Smed_v6_14651_0_1, dd_Smed_v6_14651_0_1, [RH, Score=161, Expect=9e-46]} {RNA1509_10628} {RNA1310_9160} {RNA815_10117.1}
7. MligTC455_38757 498 10.37 Mlig455_062546

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.796

Region-enriched R4: 2.609/0.00032

Regeneration-downregulated R4: -2.641

Regeneration-depleted R4: -2.641

 ABCA5 1.739 0.770 - - - - 0.969 Mlig455_062546 {REF} {Length: 4504} {Pfam: ABC transporter [PF00005.29, score=107.7]; ABC-2 family transporter protein [PF12698.9, score=24.4]; P-loop containing region of AAA domain [PF13555.8, score=22.4]; RsgA GTPase [PF03193.18, score=22.0]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=21.8]; AAA domain [PF13401.8, score=20.4]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=119, Expect=4e-26]; ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=117, Expect=1e-25]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=105, Expect=3e-22]} {Dmel: FBgn0261998, CG42816, [Score=77.8, Expect=6e-14]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=103, Expect=6e-22]} {Smed: dd_Smed_v6_10304_0_1, dd_Smed_v6_10304_0_1, [Score=68.9, Expect=2e-11]} {RNA1509_10310} {RNA1310_863.1} {RNA815_265.1}
8. MligTC455_20285 263 5.47 Mlig455_002858, Mlig455_033191, Mlig455_047036

Neo: -

Age: logFC(26M/2M)=-0.594

Region-enriched R4: 3.206/0.02054

 PGBD4 1.709 0.750 - - - - 0.959

Mlig455_002858 {REF} {Length: 4949} {Pfam: Transposase IS4 [PF13843.8, score=210.5]} {Human: ENSG00000182405, PGBD4, piggyBac transposable element derived 4, [Score=185, Expect=6e-51]} {Smed: dd_Smed_v6_48522_0_1, dd_Smed_v6_48522_0_1, [Score=106, Expect=9e-26]} {RNA1509_36830} {RNA1310_29281.1, RNA1509_36830} {RNA1509_36830, RNA815_7938}

Mlig455_033191 {REF} {Length: 2042} {RNA1509_31170} {RNA1310_9578.1} {RNA815_32453}

Mlig455_047036 {REF} {Length: 2129} {Pfam: Transposase IS4 [PF13843.8, score=140.9]} {Human: ENSG00000182405, PGBD4, piggyBac transposable element derived 4, [Score=139, Expect=2e-36]} {Smed: dd_Smed_v6_20008_0_3, dd_Smed_v6_20008_0_3, [Score=77.4, Expect=2e-17]} {RNA1509_54804} {RNA1310_35596} {RNA815_7938}
9. MligTC455_42329 23 0.48 Mlig455_067682

Neo: -

Age: -

 0.961 - 0.961 - - - - Mlig455_067682 {REF} {Length: 3699} {Pfam: Immunoglobulin domain [PF13895.8, score=59.5]; Immunoglobulin domain [PF13927.8, score=40.0]; Immunoglobulin I-set domain [PF07679.18, score=32.9]; Izumo-like Immunoglobulin domain [PF16706.7, score=29.3]; Immunoglobulin domain [PF00047.27, score=23.8]; Immunoglobulin V-set domain [PF07686.19, score=20.9]; F5/8 type C domain [PF00754.27, score=20.1]} {Mouse: ENSMUSG00000061462, Obscn, obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, [Score=58.5, Expect=6e-08]} {RNA1509_58583} {RNA1310_84845} {RNA815_37856}
10. MligTC455_07817 87 1.81 Mlig455_008042

Neo: Germline

Age: -

 0.955 0.955 - - - - - Mlig455_008042 {REF} {Length: 1040} {RNA1509_56901} {RNA1310_38278} {RNA815_20254}

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