TomoSeq data search

Data search

Results for MligTC455_31442

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31442	10	0.21	Mlig455_022592	Neo: - Age: -	LRIG2	Mlig455_022592 {REF} {Length: 6276} {Pfam: Leucine rich repeat [PF13855.8, score=178.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=112.4]; Immunoglobulin domain [PF13927.8, score=98.0]; Immunoglobulin I-set domain [PF07679.18, score=89.8]; Immunoglobulin domain [PF13895.8, score=73.3]; Immunoglobulin domain [PF00047.27, score=66.5]; Immunoglobulin V-set domain [PF07686.19, score=49.6]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=47.8]; Leucine Rich Repeat [PF00560.35, score=33.9]; Leucine-rich repeat [PF14580.8, score=33.1]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=25.7]; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain [PF16681.7, score=21.9]; Izumo-like Immunoglobulin domain [PF16706.7, score=19.8]} {Human: ENSG00000198799, LRIG2, leucine rich repeats and immunoglobulin like domains 2, [RH, Score=237, Expect=2e-63]; ENSG00000139263, LRIG3, leucine rich repeats and immunoglobulin like domains 3, [RH, Score=226, Expect=6e-60]} {Mouse: ENSMUSG00000020105, Lrig3, leucine-rich repeats and immunoglobulin-like domains 3, [RH, Score=238, Expect=1e-63]; ENSMUSG00000032913, Lrig2, leucine-rich repeats and immunoglobulin-like domains 2, [RH, Score=233, Expect=3e-62]} {Dmel: FBgn0034083, lbk, lambik, [RH, Score=181, Expect=5e-46]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [RH, Score=190, Expect=3e-49]} {Smed: dd_Smed_v6_10532_0_1, dd_Smed_v6_10532_0_1, [RH, Score=161, Expect=6e-40]} {RNA1509_17340, RNA1509_6069} {RNA1310_1086, RNA1509_17340} {RNA1509_17340, RNA815_1586}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31442

0.21

Mlig455_022592

Neo: -

Age: -

LRIG2

Mlig455_022592 {REF} {Length: 6276} {Pfam: Leucine rich repeat [PF13855.8, score=178.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=112.4]; Immunoglobulin domain [PF13927.8, score=98.0]; Immunoglobulin I-set domain [PF07679.18, score=89.8]; Immunoglobulin domain [PF13895.8, score=73.3]; Immunoglobulin domain [PF00047.27, score=66.5]; Immunoglobulin V-set domain [PF07686.19, score=49.6]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=47.8]; Leucine Rich Repeat [PF00560.35, score=33.9]; Leucine-rich repeat [PF14580.8, score=33.1]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=25.7]; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain [PF16681.7, score=21.9]; Izumo-like Immunoglobulin domain [PF16706.7, score=19.8]} {Human: ENSG00000198799, LRIG2, leucine rich repeats and immunoglobulin like domains 2, [RH, Score=237, Expect=2e-63]; ENSG00000139263, LRIG3, leucine rich repeats and immunoglobulin like domains 3, [RH, Score=226, Expect=6e-60]} {Mouse: ENSMUSG00000020105, Lrig3, leucine-rich repeats and immunoglobulin-like domains 3, [RH, Score=238, Expect=1e-63]; ENSMUSG00000032913, Lrig2, leucine-rich repeats and immunoglobulin-like domains 2, [RH, Score=233, Expect=3e-62]} {Dmel: FBgn0034083, lbk, lambik, [RH, Score=181, Expect=5e-46]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [RH, Score=190, Expect=3e-49]} {Smed: dd_Smed_v6_10532_0_1, dd_Smed_v6_10532_0_1, [RH, Score=161, Expect=6e-40]} {RNA1509_17340, RNA1509_6069} {RNA1310_1086, RNA1509_17340} {RNA1509_17340, RNA815_1586}

Cumulative graph for MligTC455_31442

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_31442

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31442	10	0.21	Mlig455_022592	Neo: - Age: -	LRIG2	1	-	-	-	-	-	1.000	Mlig455_022592 {REF} {Length: 6276} {Pfam: Leucine rich repeat [PF13855.8, score=178.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=112.4]; Immunoglobulin domain [PF13927.8, score=98.0]; Immunoglobulin I-set domain [PF07679.18, score=89.8]; Immunoglobulin domain [PF13895.8, score=73.3]; Immunoglobulin domain [PF00047.27, score=66.5]; Immunoglobulin V-set domain [PF07686.19, score=49.6]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=47.8]; Leucine Rich Repeat [PF00560.35, score=33.9]; Leucine-rich repeat [PF14580.8, score=33.1]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=25.7]; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain [PF16681.7, score=21.9]; Izumo-like Immunoglobulin domain [PF16706.7, score=19.8]} {Human: ENSG00000198799, LRIG2, leucine rich repeats and immunoglobulin like domains 2, [RH, Score=237, Expect=2e-63]; ENSG00000139263, LRIG3, leucine rich repeats and immunoglobulin like domains 3, [RH, Score=226, Expect=6e-60]} {Mouse: ENSMUSG00000020105, Lrig3, leucine-rich repeats and immunoglobulin-like domains 3, [RH, Score=238, Expect=1e-63]; ENSMUSG00000032913, Lrig2, leucine-rich repeats and immunoglobulin-like domains 2, [RH, Score=233, Expect=3e-62]} {Dmel: FBgn0034083, lbk, lambik, [RH, Score=181, Expect=5e-46]} {Celegans: WBGene00020649, sma-10, Leucine-rich repeats and immunoglobulin-like domains protein sma-10, [RH, Score=190, Expect=3e-49]} {Smed: dd_Smed_v6_10532_0_1, dd_Smed_v6_10532_0_1, [RH, Score=161, Expect=6e-40]} {RNA1509_17340, RNA1509_6069} {RNA1310_1086, RNA1509_17340} {RNA1509_17340, RNA815_1586}
2.	MligTC455_11981	20	0.42	Mlig455_039506	Neo: - Age: -		0.975	-	-	-	-	-	0.975	Mlig455_039506 {REF} {Length: 1301} {RNA1310_121196}
3.	MligTC455_18200	126	2.62	Mlig455_026423, Mlig455_044776, Mlig455_053675	Neo: - Age: - Region-enriched R4: 6.407/0.01455		0.96	-	-	-	-	-	0.960	Mlig455_026423 {REF} {Length: 966} {NoTransDecoderORF} {RNA1310_73231} Mlig455_044776 {REF} {Length: 966} {NoTransDecoderORF} {RNA1310_73231} Mlig455_053675 {REF} {Length: 210} {NoTransDecoderORF} {RNA1310_73231}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts