TomoSeq data search

Data search

Results for MligTC455_31473

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31473	140	2.91	Mlig455_034499	Neo: - Age: Down-Up-Down	NR1H3	Mlig455_034499 {REF} {Length: 3376} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=74.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=27.2]} {Human: ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=157, Expect=2e-41]} {Mouse: ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=152, Expect=4e-40]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=148, Expect=2e-38]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [RH, Score=129, Expect=2e-31]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [RH, Score=126, Expect=3e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=105, Expect=4e-24]} {RNA1509_34379} {RNA1310_14681.1} {RNA815_23041}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31473

140

2.91

Mlig455_034499

Neo: -

Age: Down-Up-Down

NR1H3

Mlig455_034499 {REF} {Length: 3376} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=74.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=27.2]} {Human: ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=157, Expect=2e-41]} {Mouse: ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=152, Expect=4e-40]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=148, Expect=2e-38]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [RH, Score=129, Expect=2e-31]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [RH, Score=126, Expect=3e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=105, Expect=4e-24]} {RNA1509_34379} {RNA1310_14681.1} {RNA815_23041}

Cumulative graph for MligTC455_31473

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.493	2.232	1.00000	1.00000
RegionR2	0.926	2.232	0.56553	0.92658
RegionR3	0.78	2.232	0.53032	1.00000
RegionR4	0.502	2.232	0.66132	0.96075
RegionR5	0.286	2.232	0.68668	1.00000
RegionR6	1.924	2.232	0.22089	0.80063
RegionR7	-3.479	2.232	1.00000	1.00000
RegionR8	1.553	2.232	0.41992	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.343	2.232	0.99978	1.00000
RegenerationR2	1.709	2.232	0.28573	0.72858
RegenerationR3	1.567	2.232	0.40316	0.80475
RegenerationR4	2.011	2.232	0.32825	0.76369
RegenerationR5	2.549	2.232	0.14426	0.55949
RegenerationR6	1.9	2.232	0.26921	0.61951
RegenerationBL	3.437	2.232	0.05605	0.27440
RegenerationTP	4.122	2.232	0.05992	0.39688

Genes with expression patterns similar to MligTC455_31473

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31473	140	2.91	Mlig455_034499	Neo: - Age: Down-Up-Down	NR1H3	4	-	-	1.000	1.000	1.000	1.000	Mlig455_034499 {REF} {Length: 3376} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=74.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=27.2]} {Human: ENSG00000025434, NR1H3, nuclear receptor subfamily 1 group H member 3, [Score=157, Expect=2e-41]} {Mouse: ENSMUSG00000002108, Nr1h3, nuclear receptor subfamily 1, group H, member 3, [Score=152, Expect=4e-40]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=148, Expect=2e-38]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [RH, Score=129, Expect=2e-31]} {Celegans: WBGene00003638, nhr-48, Nuclear hormone receptor family member nhr-48, [RH, Score=126, Expect=3e-30]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=105, Expect=4e-24]} {RNA1509_34379} {RNA1310_14681.1} {RNA815_23041}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts