Data search
Results for MligTC455_31572
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31572 | 921 | 19.19 | Mlig455_059365, Mlig455_065572 | Neo: - Age: - |
Mlig455_059365 {REF} {Length: 3107} {RNA1509_20648} {RNA1310_15498} {RNA815_27569} Mlig455_065572 {REF} {Length: 1883} {TRANSSPLICED} {RNA1509_20648, RNA1509_54985} {RNA1310_15498, RNA1509_20648, RNA1509_54985} {RNA1509_20648, RNA1509_54985, RNA815_27569} |
Cumulative graph for MligTC455_31572
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.756 | 4.6 | 0.51235 | 1.00000 | |
| RegionR2 | 0.129 | 4.6 | 0.83359 | 1.00000 | |
| RegionR3 | -0.048 | 4.6 | 0.92107 | 1.00000 | |
| RegionR4 | -0.314 | 4.6 | 0.57484 | 0.89218 | |
| RegionR5 | 0.691 | 4.6 | 0.09718 | 0.29927 | |
| RegionR6 | 0.307 | 4.6 | 0.51441 | 1.00000 | |
| RegionR7 | 0.39 | 4.6 | 0.46268 | 1.00000 | |
| RegionR8 | -0.399 | 4.6 | 0.58082 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.259 | 4.6 | 0.88007 | 1.00000 | |
| RegenerationR2 | 0.636 | 4.6 | 0.22808 | 0.67586 | |
| RegenerationR3 | 0.747 | 4.6 | 0.19838 | 0.63298 | |
| RegenerationR4 | 0.791 | 4.6 | 0.19499 | 0.64015 | |
| RegenerationR5 | 0.128 | 4.6 | 0.80986 | 0.99139 | |
| RegenerationR6 | 0.656 | 4.6 | 0.23209 | 0.57907 | |
| RegenerationBL | 0.778 | 4.6 | 0.18198 | 0.51098 | |
| RegenerationTP | -0.499 | 4.6 | 0.48211 | 0.88956 |
Genes with expression patterns similar to MligTC455_31572
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31572 | 921 | 19.19 | Mlig455_059365, Mlig455_065572 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059365 {REF} {Length: 3107} {RNA1509_20648} {RNA1310_15498} {RNA815_27569} Mlig455_065572 {REF} {Length: 1883} {TRANSSPLICED} {RNA1509_20648, RNA1509_54985} {RNA1310_15498, RNA1509_20648, RNA1509_54985} {RNA1509_20648, RNA1509_54985, RNA815_27569} |
|
| 2. | MligTC455_50471 | 2045 | 42.6 | Mlig455_014184, Mlig455_014206 | Neo: Neoblast Age: Down-Up-Up |
DDX47 | 3.291 | 0.757 | - | - | 0.959 | 0.799 | 0.776 | Mlig455_014184 {REF} {Length: 1814} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=102.3]; DEAD/DEAH box helicase [PF00270.31, score=77.4]} {Human: ENSG00000213782, DDX47, DEAD-box helicase 47, [Score=404, Expect=2e-135]} {Mouse: ENSMUSG00000030204, Ddx47, DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, [Score=406, Expect=3e-136]} {Dmel: FBgn0032919, CG9253, [Score=402, Expect=3e-134]} {Celegans: WBGene00012059, T26G10.1, Putative ATP-dependent RNA helicase T26G10.1, [Score=369, Expect=1e-121]} {Smed: dd_Smed_v6_3384_0_1, dd_Smed_v6_3384_0_1, [Score=259, Expect=6e-80]} {RNA1509_30912} {RNA1310_18278} {RNA815_16.1} Mlig455_014206 {REF} {Length: 1651} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=164.1]; Helicase conserved C-terminal domain [PF00271.33, score=108.2]; Type III restriction enzyme, res subunit [PF04851.17, score=29.3]; AAA domain [PF13245.8, score=25.2]} {Human: ENSG00000213782, DDX47, DEAD-box helicase 47, [RH, Score=528, Expect=0.0]} {Mouse: ENSMUSG00000030204, Ddx47, DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, [RH, Score=530, Expect=0.0]} {Dmel: FBgn0032919, CG9253, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00012059, T26G10.1, Putative ATP-dependent RNA helicase T26G10.1, [RH, Score=483, Expect=2e-168]} {Smed: dd_Smed_v6_3384_0_1, dd_Smed_v6_3384_0_1, [RH, Score=373, Expect=1e-125]} {RNA1509_30912, RNA1509_6396} {RNA1310_18278, RNA1509_30912, RNA1509_6396} {RNA1509_30912, RNA1509_6396, RNA815_16.1} |
| 3. | MligTC455_44523 | 760 | 15.84 | Mlig455_053586 | Neo: - Age: - Region-enriched R4: 1.497/0.00569 |
ALDH1L2 | 2.624 | - | - | - | 0.827 | 0.965 | 0.832 | Mlig455_053586 {REF} {Length: 3423} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=573.5]; Formyl transferase [PF00551.21, score=130.8]; Formyl transferase, C-terminal domain [PF02911.20, score=31.4]; Phosphopantetheine attachment site [PF00550.27, score=25.7]} {Human: ENSG00000136010, ALDH1L2, aldehyde dehydrogenase 1 family member L2, [RH, Score=1147, Expect=0.0]; ENSG00000144908, ALDH1L1, aldehyde dehydrogenase 1 family member L1, [RH, Score=1134, Expect=0.0]} {Mouse: ENSMUSG00000020256, Aldh1l2, aldehyde dehydrogenase 1 family, member L2, [RH, Score=1150, Expect=0.0]; ENSMUSG00000030088, Aldh1l1, aldehyde dehydrogenase 1 family, member L1, [RH, Score=1143, Expect=0.0]} {Dmel: FBgn0032945, CG8665, [RH, Score=1111, Expect=0.0]} {Celegans: WBGene00000109, alh-3, 10-formyltetrahydrofolate dehydrogenase, [RH, Score=1101, Expect=0.0]} {Smed: dd_Smed_v6_5787_0_2, dd_Smed_v6_5787_0_2, [RH, Score=1164, Expect=0.0]} {RNA1509_31296, RNA1509_44405, RNA1509_805} {RNA1310_3167, RNA1509_31296, RNA1509_44405} {RNA1509_31296, RNA1509_44405, RNA815_799.1} |
| 4. | MligTC455_20195 | 207 | 4.32 | Mlig455_043728 | Neo: - |
TMEM147 | 1.717 | - | - | 0.765 | - | 0.952 | - | Mlig455_043728 {REF} {Length: 1332} {Pfam: Predicted membrane protein (DUF2053) [PF09767.11, score=174.3]} {Human: ENSG00000105677, TMEM147, transmembrane protein 147, [RH, Score=185, Expect=2e-58]} {Mouse: ENSMUSG00000006315, Tmem147, transmembrane protein 147, [RH, Score=186, Expect=4e-59]} {Dmel: FBgn0015338, CG5861, [RH, Score=161, Expect=3e-49]} {Celegans: WBGene00022734, ZK418.5, [RH, Score=142, Expect=6e-42]} {Smed: dd_Smed_v6_5146_0_1, dd_Smed_v6_5146_0_1, [RH, Score=162, Expect=1e-49]} {RNA1509_25427} {RNA1310_32467.1} {RNA815_15023} |
| 5. | MligTC455_16893 | 1257 | 26.18 | Mlig455_048960 | Neo: - Age: logFC(26M/2M)=0.170 |
USP45 | 1.668 | 0.718 | - | - | - | 0.950 | - | Mlig455_048960 {REF} {Length: 3200} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=164.3]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=57.6]; Histone H1-like nucleoprotein HC2 [PF07382.13, score=24.8]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=22.5]} {Human: ENSG00000123552, USP45, ubiquitin specific peptidase 45, [RH, Score=178, Expect=6e-46]} {Mouse: ENSMUSG00000040455, Usp45, ubiquitin specific petidase 45, [RH, Score=177, Expect=9e-46]} {Dmel: FBgn0029763, Usp16-45, Ubiquitin specific protease 16/45, [RH, Score=77.8, Expect=3e-14]} {Celegans: WBGene00008547, F07A11.4, Ubiquitin carboxyl-terminal hydrolase, [Score=82.8, Expect=7e-16]} {Smed: dd_Smed_v6_3775_0_1, dd_Smed_v6_3775_0_1, [Score=99.4, Expect=3e-21]} {RNA1509_11695, RNA1509_57335} {RNA1310_4501.1, RNA1509_57335} {RNA1509_57335, RNA815_15774} |
Berezikov Lab - 2020-2021 © ERIBA