Data search
Results for MligTC455_31677
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31677 | 82 | 1.71 | Mlig455_022673 | Neo: Int S/G2/M |
PIF1 | Mlig455_022673 {REF} {Length: 6156} {Pfam: PIF1-like helicase [PF05970.16, score=297.4]; Helitron helicase-like domain at N-terminus [PF14214.8, score=201.2]; AAA domain [PF13604.8, score=47.3]; Helicase [PF02689.16, score=24.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.7]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=89.4, Expect=2e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=85.5, Expect=2e-16]} {Celegans: WBGene00022692, ZK250.9, [Score=697, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=103, Expect=3e-22]} {RNA1509_7410} {RNA1310_616.1} {RNA815_358.1} |
Cumulative graph for MligTC455_31677
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.318 | 1.456 | 0.43764 | 1.00000 | |
| RegionR2 | -2.165 | 1.456 | 0.99963 | 1.00000 | |
| RegionR3 | -2.006 | 1.456 | 0.99953 | 1.00000 | |
| RegionR4 | 1.473 | 1.456 | 0.36995 | 0.69319 | |
| RegionR5 | 2.765 | 1.456 | 0.02946 | 0.12797 | |
| RegionR6 | 0.036 | 1.456 | 0.85400 | 1.00000 | |
| RegionR7 | 1.288 | 1.456 | 0.39930 | 1.00000 | |
| RegionR8 | 2.927 | 1.456 | 0.05553 | 0.46016 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.428 | 1.456 | 1.00000 | 1.00000 | |
| RegenerationR2 | -2.875 | 1.456 | 0.08686 | 0.47322 | |
| RegenerationR3 | 0.448 | 1.456 | 0.76848 | 0.97099 | |
| RegenerationR4 | -1.708 | 1.456 | 0.24574 | 0.69380 | |
| RegenerationR5 | -1.46 | 1.456 | 0.28658 | 0.71469 | |
| RegenerationR6 | -1.132 | 1.456 | 0.50966 | 0.81322 | |
| RegenerationBL | -1.746 | 1.456 | 0.32016 | 0.68744 | |
| RegenerationTP | -6.163 | 1.456 | 0.01562 | 0.21435 |
Genes with expression patterns similar to MligTC455_31677
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31677 | 82 | 1.71 | Mlig455_022673 | Neo: Int S/G2/M |
PIF1 | 4 | 1.000 | - | 1.000 | - | 1.000 | 1.000 | Mlig455_022673 {REF} {Length: 6156} {Pfam: PIF1-like helicase [PF05970.16, score=297.4]; Helitron helicase-like domain at N-terminus [PF14214.8, score=201.2]; AAA domain [PF13604.8, score=47.3]; Helicase [PF02689.16, score=24.1]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.7]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=89.4, Expect=2e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=85.5, Expect=2e-16]} {Celegans: WBGene00022692, ZK250.9, [Score=697, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=103, Expect=3e-22]} {RNA1509_7410} {RNA1310_616.1} {RNA815_358.1} |
| 2. | MligTC455_12989 | 71 | 1.48 | Mlig455_069277 | Neo: Irradiation Age: logFC(26M/2M)=0.362 |
MNAT1 | 1.838 | - | - | 0.872 | - | 0.966 | - | Mlig455_069277 {REF} {Length: 2013} {TRANSSPLICED} {Pfam: CDK-activating kinase assembly factor MAT1 [PF06391.15, score=127.4]; Zinc finger, C3HC4 type (RING finger) [PF17121.7, score=51.1]; zinc-RING finger domain [PF14634.8, score=24.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=24.0]; Zinc-binding RING-finger [PF14569.8, score=22.6]; RING-type zinc-finger [PF13445.8, score=22.2]; P-11 zinc finger [PF03854.16, score=21.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=19.3]; Prokaryotic RING finger family 4 [PF14447.8, score=19.3]; RING/Ubox like zinc-binding domain [PF14570.8, score=18.7]} {Human: ENSG00000020426, MNAT1, MNAT1, CDK activating kinase assembly factor, [RH, Score=191, Expect=6e-59]} {Mouse: ENSMUSG00000021103, Mnat1, menage a trois 1, [RH, Score=197, Expect=3e-61]} {Dmel: FBgn0024956, Mat1, Menage a trois 1, [RH, Score=198, Expect=1e-61]} {Celegans: WBGene00018769, mnat-1, MNAT (Menage a trois) TFIIH subunit, [RH, Score=151, Expect=1e-43]} {Smed: dd_Smed_v6_5889_0_2, dd_Smed_v6_5889_0_2, [RH, Score=94.7, Expect=1e-22]} {RNA1509_33739} {RNA1310_33720.1, RNA1509_33739} {RNA1509_33739, RNA815_35140} |
| 3. | MligTC455_48886 | 198 | 4.13 | Mlig455_015357 | Neo: - Age: - Region-enriched R5: 1.919/0.03368 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_015357 {REF} {Length: 2156} {TRANSSPLICED} {Pfam: Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=51.3]; Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=29.7]} {RNA1509_15686} {RNA1310_3343.1, RNA1509_15686} {RNA1509_15686, RNA815_561.1} | |
| 4. | MligTC455_46154 | 1268 | 26.43 | Mlig455_037558, Mlig455_057319 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.248/0.00494 |
MSH2 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_037558 {REF} {Length: 3167} {TRANSSPLICED} {Pfam: MutS domain V [PF00488.23, score=246.6]; MutS domain III [PF05192.20, score=113.4]; MutS family domain IV [PF05190.20, score=57.1]; MutS domain II [PF05188.19, score=21.6]} {Human: ENSG00000095002, MSH2, mutS homolog 2, [RH, Score=624, Expect=0.0]} {Mouse: ENSMUSG00000024151, Msh2, mutS homolog 2, [RH, Score=610, Expect=0.0]} {Dmel: FBgn0015546, spel1, spellchecker1, [RH, Score=542, Expect=1e-179]} {Celegans: WBGene00003418, msh-2, MSH (MutS Homolog) family, [RH, Score=397, Expect=6e-125]} {Smed: dd_Smed_v6_11434_0_1, dd_Smed_v6_11434_0_1, [RH, Score=513, Expect=4e-169]} {RNA1509_7318} {RNA1310_4696.1} {RNA815_1447} Mlig455_057319 {REF} {Length: 3167} {TRANSSPLICED} {Pfam: MutS domain V [PF00488.23, score=246.6]; MutS domain III [PF05192.20, score=113.1]; MutS family domain IV [PF05190.20, score=57.1]; MutS domain II [PF05188.19, score=21.6]} {Human: ENSG00000095002, MSH2, mutS homolog 2, [RH, Score=623, Expect=0.0]} {Mouse: ENSMUSG00000024151, Msh2, mutS homolog 2, [RH, Score=608, Expect=0.0]} {Dmel: FBgn0015546, spel1, spellchecker1, [RH, Score=544, Expect=2e-180]} {Celegans: WBGene00003418, msh-2, MSH (MutS Homolog) family, [RH, Score=399, Expect=1e-125]} {Smed: dd_Smed_v6_11434_0_1, dd_Smed_v6_11434_0_1, [RH, Score=514, Expect=2e-169]} {RNA1509_7318} {RNA1310_4696.1, RNA1509_7318} {RNA1509_7318, RNA815_1447} |
| 5. | MligTC455_13173 | 34 | 0.71 | Mlig455_006243 | Neo: - Age: - Region-enriched R4: 8.199/0.00007 |
0.965 | - | - | - | - | 0.965 | - | Mlig455_006243 {REF} {Length: 1210} {RNA1310_54678} {RNA815_22239.1} | |
| 6. | MligTC455_19234 | 144 | 3.01 | Mlig455_013422 | Neo: - Age: - |
PCDH1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_013422 {REF} {Length: 5999} {Pfam: Cadherin domain [PF00028.19, score=190.7]; Cadherin-like [PF16184.7, score=28.6]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=218, Expect=2e-57]; ENSG00000184226, PCDH9, protocadherin 9, [Score=211, Expect=6e-55]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=224, Expect=7e-60]} {Dmel: FBgn0024836, stan, starry night, [Score=172, Expect=8e-43]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=147, Expect=3e-35]} {Smed: dd_Smed_v6_21207_0_1, dd_Smed_v6_21207_0_1, [Score=290, Expect=8e-82]} {RNA1509_34166} {RNA1310_7773} {RNA815_31630} |
| 7. | MligTC455_44895 | 217 | 4.53 | Mlig455_059258 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.003/0.03137 |
SMARCC2 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_059258 {REF} {Length: 2230} {TRANSSPLICED} {Pfam: SWIRM domain [PF04433.19, score=108.8]; SWIRM-associated region 1 [PF16495.7, score=79.8]; SWIRM-associated domain at the C-terminal [PF16498.7, score=47.1]; Myb-like DNA-binding domain [PF00249.33, score=42.8]; Myb-like DNA-binding domain [PF13921.8, score=28.7]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [RH, Score=446, Expect=1e-142]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [RH, Score=448, Expect=9e-145]} {Dmel: FBgn0002783, mor, moira, [RH, Score=339, Expect=4e-103]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [RH, Score=329, Expect=1e-102]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [RH, Score=406, Expect=6e-128]} {RNA1509_39768} {RNA1310_5494.1} {RNA815_22591} |
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