Data search


search
Exact
Search

Results for MligTC455_31698

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31698 72 1.50 Mlig455_059826

Neo: -

Age: logFC(26M/2M)=0.549

Mlig455_059826 {REF} {Length: 2325} {TRANSSPLICED} {Smed: dd_Smed_v6_5594_0_6, dd_Smed_v6_5594_0_6, [Score=53.5, Expect=1e-07]} {RNA1310_24341.2} {RNA815_39166}

Cumulative graph for MligTC455_31698

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.478 1.745 1.00000 1.00000
RegionR2 3.271 1.745 0.01846 0.14554
RegionR3 2.109 1.745 0.09049 0.53124
RegionR4 0.098 1.745 0.76383 1.00000
RegionR5 1.135 1.745 0.31920 0.66034
RegionR6 1.807 1.745 0.15965 0.71230
RegionR7 1.821 1.745 0.19471 0.80118
RegionR8 -4.763 1.745 0.28730 0.91468

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.303 1.745 0.89065 1.00000
RegenerationR2 -0.552 1.745 0.39001 0.80843
RegenerationR3 0.443 1.745 0.56480 0.89148
RegenerationR4 1.147 1.745 0.16519 0.60010
RegenerationR5 0.945 1.745 0.20022 0.63295
RegenerationR6 0.733 1.745 0.37746 0.71915
RegenerationBL 1.512 1.745 0.37148 0.73958
RegenerationTP -1.889 1.745 0.99963 1.00000


Genes with expression patterns similar to MligTC455_31698

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31698 72 1.5 Mlig455_059826

Neo: -

Age: logFC(26M/2M)=0.549

5 - 1.000 1.000 1.000 1.000 1.000 Mlig455_059826 {REF} {Length: 2325} {TRANSSPLICED} {Smed: dd_Smed_v6_5594_0_6, dd_Smed_v6_5594_0_6, [Score=53.5, Expect=1e-07]} {RNA1310_24341.2} {RNA815_39166}
2. MligTC455_08031 24 0.51 Mlig455_012963

Neo: -

Age: -

ZAN 1.68 - - - 0.713 0.967 - Mlig455_012963 {REF} {Length: 2088} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=48.4]; PT repeat [PF04886.14, score=36.2]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000038085, Cnbd2, cyclic nucleotide binding domain containing 2, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0029807, CG3108, [Score=63.2, Expect=5e-10]} {Smed: dd_Smed_v6_19613_0_1, dd_Smed_v6_19613_0_1, [Score=131, Expect=3e-33]} {RNA1509_10570} {RNA1310_7155.1} {RNA815_1910.1}
3. MligTC455_52004 138 2.88 Mlig455_004252

Neo: -

Age: -

SPAG6 0.974 - - - - 0.974 - Mlig455_004252 {REF} {Length: 2533} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=121.6]; HEAT repeats [PF13646.8, score=55.3]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=52.6]; HEAT repeat [PF02985.24, score=51.8]; HEAT-like repeat [PF13513.8, score=33.7]; Adaptin N terminal region [PF01602.22, score=30.8]; DNA alkylation repair enzyme [PF08713.13, score=30.5]; C-terminal domain of two-partite extracellular sensor domain [PF17150.6, score=30.5]; Proteasome non-ATPase 26S subunit [PF10508.11, score=21.9]; Rapamycin-insensitive companion of mTOR, N-term [PF14664.8, score=20.2]} {Human: ENSG00000077327, SPAG6, sperm associated antigen 6, [RH, Score=865, Expect=0.0]} {Mouse: ENSMUSG00000022783, Spag6l, sperm associated antigen 6-like, [RH, Score=881, Expect=0.0]} {Dmel: FBgn0027338, Kap-alpha3, karyopherin alpha3, [Score=67.0, Expect=2e-11]} {Celegans: WBGene00002074, ima-3, Importin subunit alpha-3, [Score=72.0, Expect=3e-13]} {Smed: dd_Smed_v6_3991_0_1, dd_Smed_v6_3991_0_1, [RH, Score=896, Expect=0.0]} {RNA1509_4523, RNA1509_54306} {RNA1310_15155.1, RNA1509_4523, RNA1509_54306} {RNA1509_4523, RNA1509_54306, RNA815_5882}
4. MligTC455_12128 236 4.91 Mlig455_022096, Mlig455_053634

Neo: -

Age: -

Region-enriched R5: 2.162/0.01635

0.964 - - - 0.964 - -

Mlig455_022096 {REF} {Length: 2464} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=21.8]; F-box domain [PF00646.35, score=21.6]} {RNA1509_24923} {RNA1310_14282} {RNA815_5392}

Mlig455_053634 {REF} {Length: 2470} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=21.8]; F-box domain [PF00646.35, score=21.6]} {RNA1509_24923} {RNA1310_14282, RNA1509_24923} {RNA1509_24923, RNA815_5392}
5. MligTC455_25260 76 1.58 Mlig455_021242

Neo: -

Age: Down-Down-Up

TMEM30B 0.954 - - - - 0.954 - Mlig455_021242 {REF} {Length: 2318} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=285.5]} {Human: ENSG00000182107, TMEM30B, transmembrane protein 30B, [RH, Score=261, Expect=8e-83]} {Mouse: ENSMUSG00000034435, Tmem30b, transmembrane protein 30B, [RH, Score=253, Expect=5e-80]; ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=243, Expect=4e-76]} {Dmel: FBgn0030752, CG9947, [RH, Score=302, Expect=3e-99]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [RH, Score=288, Expect=8e-94]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=293, Expect=4e-96]} {RNA1509_54431} {RNA1310_19947} {RNA815_8261.1}
6. MligTC455_41825 687 14.31 Mlig455_024304, Mlig455_024359

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.350/0.02887

0.954 - - - - 0.954 -

Mlig455_024304 {REF} {Length: 1854} {TRANSSPLICED} {RNA1509_48745} {RNA1310_27046} {RNA815_24708}

Mlig455_024359 {REF} {Length: 2019} {RNA1509_48745} {RNA1310_27046} {RNA815_24708}
7. MligTC455_53915 113 2.36 Mlig455_018452

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_018452 {REF} {Length: 3976} {TRANSSPLICED} {Pfam: Cadherin-like beta sandwich domain [PF12733.9, score=98.5]; TPR repeat [PF13414.8, score=29.6]; Tetratricopeptide repeat [PF07719.19, score=24.7]; Tetratricopeptide repeat [PF13428.8, score=23.1]; Tetratricopeptide repeat [PF13424.8, score=22.6]; Tetratricopeptide repeat [PF14559.8, score=22.0]} {Smed: dd_Smed_v6_13836_0_1, dd_Smed_v6_13836_0_1, [RH, Score=277, Expect=2e-77]} {RNA1509_15096} {RNA1310_1559.1} {RNA815_7116}
8. MligTC455_15553 1843 38.4 Mlig455_031390

Neo: -

Age: logFC(26M/2M)=0.339

DDX54 0.952 - - - - 0.952 - Mlig455_031390 {REF} {Length: 2554} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=164.3]; Helicase conserved C-terminal domain [PF00271.33, score=76.9]; Type III restriction enzyme, res subunit [PF04851.17, score=21.3]} {Human: ENSG00000123064, DDX54, DEAD-box helicase 54, [RH, Score=541, Expect=0.0]} {Mouse: ENSMUSG00000029599, Ddx54, DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, [RH, Score=525, Expect=3e-176]} {Dmel: FBgn0052344, CG32344, [RH, Score=459, Expect=3e-151]} {Celegans: WBGene00022378, Y94H6A.5, [RH, Score=493, Expect=9e-165]} {Smed: dd_Smed_v6_3250_0_1, dd_Smed_v6_3250_0_1, [RH, Score=438, Expect=2e-144]} {RNA1509_10326, RNA1509_41254, RNA1509_4494} {RNA1310_6518, RNA1509_10326, RNA1509_41254, RNA1509_4494} {RNA1509_10326, RNA1509_41254, RNA1509_4494, RNA815_7893}
9. MligTC455_17113 40 0.84 Mlig455_016491, Mlig455_046909

Neo: -

Age: -

0.951 - - - - - 0.951

Mlig455_016491 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_141638}

Mlig455_046909 {REF} {Length: 700} {NoTransDecoderORF} {RNA1310_141638}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA