TomoSeq data search

Data search

Results for MligTC455_31742

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31742	136	2.84	Mlig455_061932	Neo: - Age: -		Mlig455_061932 {REF} {Length: 3328} {RNA1509_41127} {RNA1310_10338} {RNA815_19796}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_31742

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.813	2.264	0.35022	0.99364
RegionR2	-1.896	2.264	0.05219	0.27322
RegionR3	0.371	2.264	0.55972	1.00000
RegionR4	0.16	2.264	0.83562	1.00000
RegionR5	-0.882	2.264	0.17283	0.44386
RegionR6	-0.385	2.264	0.57605	1.00000
RegionR7	0.843	2.264	0.32757	0.96198
RegionR8	-0.023	2.264	0.98062	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.808	2.264	0.28117	0.98107
RegenerationR2	2.325	2.264	0.00191	0.06666
RegenerationR3	-0.461	2.264	0.56502	0.89156
RegenerationR4	0.792	2.264	0.35882	0.78677
RegenerationR5	0.647	2.264	0.39370	0.79424
RegenerationR6	0.618	2.264	0.45894	0.77673
RegenerationBL	-0.694	2.264	0.55626	0.91223
RegenerationTP	-1.874	2.264	0.14167	0.56112

Genes with expression patterns similar to MligTC455_31742

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31742	136	2.84	Mlig455_061932	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_061932 {REF} {Length: 3328} {RNA1509_41127} {RNA1310_10338} {RNA815_19796}
2.	MligTC455_25665	102	2.12	Mlig455_004753	Neo: - Age: logFC(26M/2M)=1.462	ANKHD1-EIF4EBP3	0.973	-	-	-	-	0.973	-	Mlig455_004753 {REF} {Length: 3594} {Pfam: Protein kinase domain [PF00069.27, score=187.3]; Ankyrin repeats (3 copies) [PF12796.9, score=151.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.6]; Ankyrin repeats (many copies) [PF13637.8, score=91.2]; Ankyrin repeat [PF13606.8, score=89.9]; Ankyrin repeats (many copies) [PF13857.8, score=83.9]; Ankyrin repeat [PF00023.32, score=82.4]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000254996, ANKHD1-EIF4EBP3, ANKHD1-EIF4EBP3 readthrough, [Score=133, Expect=1e-30]; ENSG00000131503, ANKHD1, ankyrin repeat and KH domain containing 1, [Score=133, Expect=9e-31]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=132, Expect=2e-30]; ENSG00000197168, NEK5, NIMA related kinase 5, [Score=128, Expect=2e-29]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=134, Expect=3e-31]; ENSMUSG00000024483, Ankhd1, ankyrin repeat and KH domain containing 1, [Score=130, Expect=7e-30]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=132, Expect=1e-30]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=119, Expect=7e-27]} {Smed: dd_Smed_v6_11663_0_4, dd_Smed_v6_11663_0_4, [Score=144, Expect=2e-35]} {RNA1509_16775} {RNA1310_7082} {RNA815_556}
3.	MligTC455_43061	215	4.47	Mlig455_063586	Neo: - Age: logFC(26M/2M)=0.487	GGT1	0.967	-	-	-	-	-	0.967	Mlig455_063586 {REF} {Length: 3587} {Pfam: Gamma-glutamyltranspeptidase [PF01019.23, score=302.1]} {Human: ENSG00000100031, GGT1, gamma-glutamyltransferase 1, [Score=234, Expect=1e-71]} {Mouse: ENSMUSG00000006345, Ggt1, gamma-glutamyltransferase 1, [Score=226, Expect=6e-68]} {Dmel: FBgn0030796, CG4829, [Score=204, Expect=8e-59]} {Celegans: WBGene00011393, T03D8.6, [Score=205, Expect=6e-60]} {Smed: dd_Smed_v6_4591_0_3, dd_Smed_v6_4591_0_3, [Score=254, Expect=4e-80]} {RNA1509_44409} {RNA1310_26208} {RNA815_8830}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_31742

136

2.84

Mlig455_061932

Neo: -

Age: -

1.000

Mlig455_061932 {REF} {Length: 3328} {RNA1509_41127} {RNA1310_10338} {RNA815_19796}

MligTC455_25665

102

2.12

Mlig455_004753

Neo: -

Age: logFC(26M/2M)=1.462

ANKHD1-EIF4EBP3

0.973

Mlig455_004753 {REF} {Length: 3594} {Pfam: Protein kinase domain [PF00069.27, score=187.3]; Ankyrin repeats (3 copies) [PF12796.9, score=151.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.6]; Ankyrin repeats (many copies) [PF13637.8, score=91.2]; Ankyrin repeat [PF13606.8, score=89.9]; Ankyrin repeats (many copies) [PF13857.8, score=83.9]; Ankyrin repeat [PF00023.32, score=82.4]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000254996, ANKHD1-EIF4EBP3, ANKHD1-EIF4EBP3 readthrough, [Score=133, Expect=1e-30]; ENSG00000131503, ANKHD1, ankyrin repeat and KH domain containing 1, [Score=133, Expect=9e-31]; ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=132, Expect=2e-30]; ENSG00000197168, NEK5, NIMA related kinase 5, [Score=128, Expect=2e-29]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=134, Expect=3e-31]; ENSMUSG00000024483, Ankhd1, ankyrin repeat and KH domain containing 1, [Score=130, Expect=7e-30]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=132, Expect=1e-30]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=119, Expect=7e-27]} {Smed: dd_Smed_v6_11663_0_4, dd_Smed_v6_11663_0_4, [Score=144, Expect=2e-35]} {RNA1509_16775} {RNA1310_7082} {RNA815_556}

MligTC455_43061

215

4.47

Mlig455_063586

Neo: -

Age: logFC(26M/2M)=0.487

GGT1

0.967

Mlig455_063586 {REF} {Length: 3587} {Pfam: Gamma-glutamyltranspeptidase [PF01019.23, score=302.1]} {Human: ENSG00000100031, GGT1, gamma-glutamyltransferase 1, [Score=234, Expect=1e-71]} {Mouse: ENSMUSG00000006345, Ggt1, gamma-glutamyltransferase 1, [Score=226, Expect=6e-68]} {Dmel: FBgn0030796, CG4829, [Score=204, Expect=8e-59]} {Celegans: WBGene00011393, T03D8.6, [Score=205, Expect=6e-60]} {Smed: dd_Smed_v6_4591_0_3, dd_Smed_v6_4591_0_3, [Score=254, Expect=4e-80]} {RNA1509_44409} {RNA1310_26208} {RNA815_8830}