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Results for MligTC455_31769

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31769 70 1.45 Mlig455_026044

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.521

 TRIM3 Mlig455_026044 {REF} {Length: 1907} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=39.9]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=68.2, Expect=2e-11]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=68.2, Expect=1e-11]} {Celegans: WBGene00003026, lin-41, [Score=49.3, Expect=6e-06]} {RNA1509_15622} {RNA1310_14145.1} {RNA815_3900.1}

Cumulative graph for MligTC455_31769

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.581 1.665 1.00000 1.00000
RegionR2 1.023 1.665 0.45651 0.84428
RegionR3 2.753 1.665 0.03419 0.31991
RegionR4 1.413 1.665 0.29056 0.60133
RegionR5 1.503 1.665 0.23477 0.54350
RegionR6 2.485 1.665 0.07309 0.50309
RegionR7 -2.826 1.665 0.99968 1.00000
RegionR8 -2.77 1.665 0.99972 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.565 1.665 0.99996 1.00000
RegenerationR2 0.702 1.665 0.55085 0.89377
RegenerationR3 0.258 1.665 0.80988 0.98484
RegenerationR4 0.597 1.665 0.58536 0.90717
RegenerationR5 1.369 1.665 0.16969 0.59710
RegenerationR6 -1.782 1.665 0.17128 0.50258
RegenerationBL 3.205 1.665 0.11595 0.40297
RegenerationTP 4.692 1.665 0.06515 0.41156


Genes with expression patterns similar to MligTC455_31769

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31769 70 1.45 Mlig455_026044

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.521

 TRIM3 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_026044 {REF} {Length: 1907} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=39.9]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=68.2, Expect=2e-11]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=68.2, Expect=1e-11]} {Celegans: WBGene00003026, lin-41, [Score=49.3, Expect=6e-06]} {RNA1509_15622} {RNA1310_14145.1} {RNA815_3900.1}
2. MligTC455_33868 554 11.55 Mlig455_005238

Neo: -

Age: -

 MED13 0.984 - - - - - 0.984 Mlig455_005238 {REF} {Length: 7105} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=49.4]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=213, Expect=1e-54]; ENSG00000123066, MED13L, mediator complex subunit 13 like, [RH, Score=203, Expect=9e-52]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=6e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=1e-50]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=176, Expect=4e-44]} {RNA1509_5621} {RNA1310_887, RNA1509_5621} {RNA1509_5621, RNA815_2444}
3. MligTC455_25617 467 9.72 Mlig455_008276

Neo: -

Age: Down-Up-Up

 POLDIP3 0.975 - - - - - 0.975 Mlig455_008276 {REF} {Length: 2527} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.1]} {Human: ENSG00000100227, POLDIP3, DNA polymerase delta interacting protein 3, [Score=72.4, Expect=5e-13]} {Mouse: ENSMUSG00000041815, Poldip3, polymerase (DNA-directed), delta interacting protein 3, [Score=72.4, Expect=3e-13]} {Dmel: FBgn0030959, CG6961, [Score=56.2, Expect=4e-08]} {Smed: dd_Smed_v6_6532_0_3, dd_Smed_v6_6532_0_3, [Score=70.9, Expect=3e-13]} {RNA1509_32480} {RNA1310_8064.2} {RNA815_20463}
4. MligTC455_19143 186 3.86 Mlig455_040116

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_040116 {REF} {Length: 6995} {Smed: dd_Smed_v6_11519_0_1, dd_Smed_v6_11519_0_1, [RH, Score=600, Expect=0.0]} {RNA1509_43828, RNA1509_5002} {RNA1310_824.1, RNA1509_43828} {RNA1509_43828, RNA815_15829}
5. MligTC455_18885 702 14.63 Mlig455_043086

Neo: -

Age: -

Region-enriched R5: 1.483/0.00503

 0.963 - - - - - 0.963 Mlig455_043086 {REF} {Length: 1459} {TRANSSPLICED} {Pfam: Protein phosphatase 1 regulatory subunit 35 C-terminus [PF15503.8, score=21.6]} {RNA1509_29701, RNA1509_42732} {RNA1310_24161, RNA1509_29701, RNA1509_42732} {RNA1509_29701, RNA1509_42732, RNA815_18643}
6. MligTC455_51741 302 6.3 Mlig455_056929

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.274/0.02075

 MARS 0.961 - - - - - 0.961 Mlig455_056929 {REF} {Length: 3549} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=28.8} {Pfam: tRNA synthetases class I (M) [PF09334.13, score=495.0]; Anticodon binding domain of methionyl tRNA ligase [PF19303.1, score=52.7]; tRNA synthetases class I (I, L, M and V) [PF00133.24, score=40.2]} {Human: ENSG00000166986, MARS, methionyl-tRNA synthetase, [RH, Score=798, Expect=0.0]} {Mouse: ENSMUSG00000046994, Mars2, methionine-tRNA synthetase 2 (mitochondrial), [Score=113, Expect=1e-25]} {Dmel: FBgn0034401, MetRS, Methionyl-tRNA synthetase, [RH, Score=739, Expect=0.0]} {Celegans: WBGene00003415, mars-1, Methionine--tRNA ligase, cytoplasmic, [RH, Score=697, Expect=0.0]} {Smed: dd_Smed_v6_3471_0_1, dd_Smed_v6_3471_0_1, [RH, Score=665, Expect=0.0]} {RNA1509_13317, RNA1509_40640} {RNA1310_13250.1, RNA1509_13317, RNA1509_40640} {RNA1509_13317, RNA1509_40640, RNA815_453.1}
7. MligTC455_16423 671 13.98 Mlig455_063619

Neo: Irradiation

Age: -

Region-enriched R5: 1.043/0.02517

 PFAS 0.957 - - - - - 0.957 Mlig455_063619 {REF} {Length: 5734} {TRANSSPLICED} {Pfam: CobB/CobQ-like glutamine amidotransferase domain [PF13507.8, score=279.0]; AIR synthase related protein, C-terminal domain [PF02769.24, score=99.7]; Formylglycinamide ribonucleotide amidotransferase linker domain [PF18072.3, score=46.7]; Formylglycinamide ribonucleotide amidotransferase N-terminal [PF18076.3, score=45.0]} {Human: ENSG00000178921, PFAS, phosphoribosylformylglycinamidine synthase, [RH, Score=1038, Expect=0.0]} {Mouse: ENSMUSG00000020899, Pfas, phosphoribosylformylglycinamidine synthase (FGAR amidotransferase), [RH, Score=1056, Expect=0.0]} {Dmel: FBgn0000052, ade2, adenosine 2, [RH, Score=946, Expect=0.0]} {Celegans: WBGene00008654, F10F2.2, Probable phosphoribosylformylglycinamidine synthase, [RH, Score=953, Expect=0.0]} {Smed: dd_Smed_v6_5130_0_1, dd_Smed_v6_5130_0_1, [RH, Score=1002, Expect=0.0]} {RNA1509_6392} {RNA1310_1527.1} {RNA815_842.1}
8. MligTC455_52921 903 18.8 Mlig455_039568, Mlig455_051378

Neo: -

Age: -

 MLH3 0.957 - - - - - 0.957

Mlig455_039568 {REF} {Length: 890} {TRANSSPLICED} {Human: ENSG00000119684, MLH3, mutL homolog 3, [RH, Score=50.4, Expect=3e-07]} {Mouse: ENSMUSG00000021245, Mlh3, mutL homolog 3, [Score=47.8, Expect=2e-06]} {Smed: dd_Smed_v6_25712_0_1, dd_Smed_v6_25712_0_1, [RH, Score=58.2, Expect=4e-11]} {RNA1509_20519} {RNA1310_40805, RNA1509_20519} {RNA1509_20519, RNA815_19876}

Mlig455_051378 {REF} {Length: 879} {TRANSSPLICED} {Human: ENSG00000119684, MLH3, mutL homolog 3, [RH, Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000021245, Mlh3, mutL homolog 3, [Score=47.8, Expect=3e-06]} {Smed: dd_Smed_v6_25712_0_1, dd_Smed_v6_25712_0_1, [RH, Score=58.2, Expect=7e-11]} {RNA1509_20519} {RNA1310_40805} {RNA815_19876}
9. MligTC455_49547 336 7 Mlig455_028613, Mlig455_028636

Neo: -

Age: -

Region-enriched R5: 2.009/0.00823

 NR1D2 0.955 - - - - - 0.955

Mlig455_028613 {REF} {Length: 3434} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.3]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=65.5, Expect=2e-10]; ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=64.7, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=66.6, Expect=7e-12]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.2, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=3e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=5e-14]} {RNA1509_56197} {RNA1310_45687.1} {RNA815_27369.1}

Mlig455_028636 {REF} {Length: 3603} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=48.7]; Zinc finger, C2H2 type [PF00096.28, score=22.3]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=68.6, Expect=2e-11]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=67.4, Expect=9e-12]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.4, Expect=3e-11]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=66.2, Expect=9e-12]; ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=64.7, Expect=3e-10]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=64.7, Expect=2e-10]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=64.3, Expect=3e-10]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=64.3, Expect=3e-10]} {Dmel: FBgn0031257, CG4133, [RH, Score=68.6, Expect=1e-11]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=74.7, Expect=9e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=73.9, Expect=2e-13]} {RNA1509_36556} {RNA1310_20988} {RNA815_9740}
10. MligTC455_47892 119 2.49 Mlig455_054967

Neo: -

Age: -

Region-enriched R5: 2.180/0.01611

 WDR37 0.954 - - - - - 0.954 Mlig455_054967 {REF} {Length: 3048} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=77.8]} {Human: ENSG00000047056, WDR37, WD repeat domain 37, [RH, Score=201, Expect=9e-57]} {Mouse: ENSMUSG00000021147, Wdr37, WD repeat domain 37, [RH, Score=204, Expect=5e-58]} {Dmel: FBgn0038617, CG12333, [RH, Score=195, Expect=4e-55]} {Celegans: WBGene00015470, C05D2.10, [RH, Score=173, Expect=3e-47]} {Smed: dd_Smed_v6_3313_0_1, dd_Smed_v6_3313_0_1, [RH, Score=180, Expect=4e-49]} {RNA1509_16552} {RNA1310_18365} {RNA815_26613}
11. MligTC455_51549 114 2.37 Mlig455_039237

Neo: -

Age: Down-Down-Up

Regeneration-upregulated TP: 6.202

Regeneration-enriched TP: 6.202

 0.952 - - - - - 0.952 Mlig455_039237 {REF} {Length: 3108} {RNA1509_28709} {RNA1310_23779.2} {RNA815_36053}
12. MligTC455_46314 326 6.79 Mlig455_012537

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.764/0.04215

 REXO4 0.95 - - - - - 0.950 Mlig455_012537 {REF} {Length: 1122} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=54.0]} {Human: ENSG00000280706, REXO4, REX4 homolog, 3'-5' exonuclease, [RH, Score=214, Expect=3e-66]; ENSG00000148300, REXO4, REX4 homolog, 3'-5' exonuclease, [RH, Score=214, Expect=3e-66]} {Mouse: ENSMUSG00000052406, Rexo4, REX4, 3'-5' exonuclease, [RH, Score=209, Expect=1e-64]} {Dmel: FBgn0036405, CG6833, [RH, Score=168, Expect=2e-50]} {Celegans: WBGene00012465, Y17G7B.12, [RH, Score=167, Expect=2e-50]} {Smed: dd_Smed_v6_6075_0_1, dd_Smed_v6_6075_0_1, [RH, Score=198, Expect=2e-62]} {RNA1509_32258} {RNA1310_31175.1, RNA1509_32258} {RNA1509_32258, RNA815_14025}
13. MligTC455_49081 472 9.84 Mlig455_068529

Neo: -

Age: -

Region-enriched R5: 1.779/0.02721

 CANX 0.95 - - - - - 0.950 Mlig455_068529 {REF} {Length: 2120} {TRANSSPLICED} {Pfam: Calreticulin family [PF00262.20, score=463.2]} {Human: ENSG00000127022, CANX, calnexin, [Score=479, Expect=5e-163]; ENSG00000283777, CANX, calnexin, [Score=479, Expect=5e-163]} {Mouse: ENSMUSG00000020368, Canx, calnexin, [Score=468, Expect=1e-158]} {Dmel: FBgn0015622, Cnx99A, Calnexin 99A, [Score=402, Expect=4e-133]} {Celegans: WBGene00000567, cnx-1, Calnexin, [Score=391, Expect=1e-128]} {Smed: dd_Smed_v6_632_0_1, dd_Smed_v6_632_0_1, [Score=517, Expect=4e-178]} {RNA1509_44465} {RNA1310_13618.2} {RNA815_14640}

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