TomoSeq data search

Data search

Results for MligTC455_31784

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31784

15

0.31

Mlig455_043211

Neo: -

Age: -

TRIM3

Mlig455_043211 {REF} {Length: 1329} {Pfam: NHL repeat [PF01436.23, score=40.5]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=60.8, Expect=1e-09]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=60.1, Expect=3e-09]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=60.8, Expect=1e-09]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=60.1, Expect=2e-09]} {Dmel: FBgn0265356, tn, thin, [Score=53.1, Expect=2e-07]} {RNA1509_15622} {RNA1310_14145.1} {RNA815_3900.1}

Cumulative graph for MligTC455_31784

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.705	0.762	0.77150	1.00000
RegionR2	1.224	0.762	0.57601	0.93340
RegionR3	1.347	0.762	0.99915	1.00000
RegionR4	0.634	0.762	0.99892	1.00000
RegionR5	-0.663	0.762	0.99929	1.00000
RegionR6	-0.116	0.762	0.99983	1.00000
RegionR7	-2.788	0.762	0.99938	1.00000
RegionR8	-2.342	0.762	0.99934	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.132	0.762	0.36216	1.00000
RegenerationR2	-4.275	0.762	0.03762	0.31997
RegenerationR3	-4.601	0.762	0.03525	0.33252
RegenerationR4	-3.676	0.762	0.03368	0.29599
RegenerationR5	-2.701	0.762	0.04798	0.35408
RegenerationR6	-3.24	0.762	0.06661	0.32372
RegenerationBL	-1.566	0.762	0.99981	1.00000
RegenerationTP	-0.619	0.762	0.99990	1.00000

Genes with expression patterns similar to MligTC455_31784

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31784	15	0.31	Mlig455_043211	Neo: - Age: -	TRIM3	2	1.000	-	1.000	-	-	-	Mlig455_043211 {REF} {Length: 1329} {Pfam: NHL repeat [PF01436.23, score=40.5]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=60.8, Expect=1e-09]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=60.1, Expect=3e-09]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=60.8, Expect=1e-09]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=60.1, Expect=2e-09]} {Dmel: FBgn0265356, tn, thin, [Score=53.1, Expect=2e-07]} {RNA1509_15622} {RNA1310_14145.1} {RNA815_3900.1}
2.	MligTC455_31783	10	0.21	Mlig455_028782	Neo: - Age: -	TRIM3	1.842	0.857	-	0.985	-	-	-	Mlig455_028782 {REF} {Length: 574} {Pfam: NHL repeat [PF01436.23, score=29.0]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=44.7, Expect=1e-06]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=44.3, Expect=1e-06]} {RNA1509_31901} {RNA1310_48474} {RNA815_3900.10}
3.	MligTC455_39993	65	1.36	Mlig455_063844	Neo: - Age: -		0.994	-	-	0.994	-	-	-	Mlig455_063844 {REF} {Length: 1099} {TRANSSPLICED} {RNA1509_23775} {RNA1310_25810.1} {RNA815_27579}
4.	MligTC455_08317	392	8.17	Mlig455_028420, Mlig455_028441	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.296		0.951	-	-	0.951	-	-	-	Mlig455_028420 {REF} {Length: 7899} {TRANSSPLICED} {Pfam: Nucleoside 2-deoxyribosyltransferase like [PF15891.7, score=119.7]} {Dmel: FBgn0003209, raw, [RH, Score=133, Expect=4e-32]} {Celegans: WBGene00007260, olrn-1, [RH, Score=87.8, Expect=5e-18]} {Smed: dd_Smed_v6_6200_0_1, dd_Smed_v6_6200_0_1, [RH, Score=201, Expect=4e-56]} {RNA1509_25351} {RNA1310_13410, RNA1509_25351} {RNA1509_25351, RNA815_29893} Mlig455_028441 {REF} {Length: 7529} {TRANSSPLICED} {Pfam: Nucleoside 2-deoxyribosyltransferase like [PF15891.7, score=119.7]} {Dmel: FBgn0003209, raw, [RH, Score=136, Expect=2e-33]} {Celegans: WBGene00007260, olrn-1, [RH, Score=87.8, Expect=5e-18]} {Smed: dd_Smed_v6_6200_0_1, dd_Smed_v6_6200_0_1, [RH, Score=200, Expect=8e-56]} {RNA1509_25351} {RNA1310_13410} {RNA815_29893}

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