Data search
Results for MligTC455_31790
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31790 | 51 | 1.07 | Mlig455_026223 | Neo: - Age: - |
TRIM3 | Mlig455_026223 {REF} {Length: 2755} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=29.1]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=58.9, Expect=2e-08]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=58.9, Expect=1e-08]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=58.9, Expect=1e-08]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} |
Cumulative graph for MligTC455_31790
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.421 | 1.46 | 1.00000 | 1.00000 | |
| RegionR2 | -0.888 | 1.46 | 0.84749 | 1.00000 | |
| RegionR3 | 2.786 | 1.46 | 0.01166 | 0.16974 | |
| RegionR4 | 2.482 | 1.46 | 0.07533 | 0.25425 | |
| RegionR5 | 1.46 | 1.46 | 0.21467 | 0.51351 | |
| RegionR6 | 1.367 | 1.46 | 0.26607 | 0.85405 | |
| RegionR7 | -3.183 | 1.46 | 0.99975 | 1.00000 | |
| RegionR8 | -2.603 | 1.46 | 0.99980 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.882 | 1.46 | 0.99986 | 1.00000 | |
| RegenerationR2 | -0.864 | 1.46 | 0.46869 | 0.85736 | |
| RegenerationR3 | -2.481 | 1.46 | 0.00269 | 0.09064 | |
| RegenerationR4 | -0.744 | 1.46 | 0.41381 | 0.82256 | |
| RegenerationR5 | -0.681 | 1.46 | 0.40467 | 0.80185 | |
| RegenerationR6 | -2.543 | 1.46 | 0.02310 | 0.18887 | |
| RegenerationBL | 2.706 | 1.46 | 0.14211 | 0.44947 | |
| RegenerationTP | 3.62 | 1.46 | 0.15422 | 0.58089 |
Genes with expression patterns similar to MligTC455_31790
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31790 | 51 | 1.07 | Mlig455_026223 | Neo: - Age: - |
TRIM3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_026223 {REF} {Length: 2755} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=29.1]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=58.9, Expect=2e-08]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=58.9, Expect=1e-08]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=58.9, Expect=1e-08]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} |
| 2. | MligTC455_48627 | 62 | 1.3 | Mlig455_041499 | Neo: - Age: - |
1.735 | - | - | - | - | 0.772 | 0.963 | Mlig455_041499 {REF} {Length: 702} {NoTransDecoderORF} {RNA1310_82174} {RNA815_53726} | |
| 3. | MligTC455_23064 | 314 | 6.55 | Mlig455_049203 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.328 Region-enriched R4: 2.000/0.03807 |
0.979 | - | - | - | - | 0.979 | - | Mlig455_049203 {REF} {Length: 2098} {Pfam: PAN domain [PF00024.28, score=20.4]} {RNA1509_42073} {RNA1310_15900.1, RNA1509_42073} {RNA1509_42073, RNA815_12535} | |
| 4. | MligTC455_35593 | 107 | 2.23 | Mlig455_062186 | Neo: - Age: - |
0.969 | - | - | - | 0.969 | - | - | Mlig455_062186 {REF} {Length: 1785} {RNA1509_33655} {RNA1310_17820.1} {RNA815_11646} | |
| 5. | MligTC455_37763 | 46 | 0.95 | Mlig455_039133 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_039133 {REF} {Length: 822} {NoTransDecoderORF} | |
| 6. | MligTC455_16588 | 35 | 0.73 | Mlig455_012398 | Neo: - Age: - |
0.965 | - | - | - | 0.965 | - | - | Mlig455_012398 {REF} {Length: 1387} {NoTransDecoderORF} {RNA1509_54282} {RNA1310_120272} {RNA815_37967} | |
| 7. | MligTC455_51870 | 192 | 4 | Mlig455_004925 | Neo: - Age: logFC(26M/2M)=-0.367 |
ZFYVE9 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_004925 {REF} {Length: 2113} {Pfam: Domain of unknown function (DUF3480) [PF11979.10, score=83.2]; Atrophin-1 family [PF03154.17, score=16.9]} {Human: ENSG00000157077, ZFYVE9, zinc finger FYVE-type containing 9, [Score=129, Expect=1e-30]} {Mouse: ENSMUSG00000034557, Zfyve9, zinc finger, FYVE domain containing 9, [Score=130, Expect=1e-31]} {Dmel: FBgn0026369, Sara, Smad anchor for receptor activation, [Score=115, Expect=1e-26]} {Smed: dd_Smed_v6_8098_0_1, dd_Smed_v6_8098_0_1, [Score=88.2, Expect=4e-18]} {RNA1509_31204} {RNA1310_16232} {RNA815_22696} |
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