TomoSeq data search

Data search

Results for MligTC455_31800

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31800	52	1.08	Mlig455_026258, Mlig455_050834	Neo: - Age: -	TRIM3	Mlig455_026258 {REF} {Length: 2117} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=43.7]; PQQ-like domain [PF13360.8, score=18.5]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=67.8, Expect=1e-12]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=67.8, Expect=1e-12]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=67.8, Expect=8e-13]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=67.8, Expect=8e-13]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} Mlig455_050834 {REF} {Length: 712} {Pfam: Maintenance of mitochondrial structure and function [PF13012.8, score=20.3]} {RNA1509_23300} {RNA1310_50776.1} {RNA815_3900.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31800

1.08

Mlig455_026258, Mlig455_050834

Neo: -

Age: -

TRIM3

Mlig455_026258 {REF} {Length: 2117} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=43.7]; PQQ-like domain [PF13360.8, score=18.5]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=67.8, Expect=1e-12]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=67.8, Expect=1e-12]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=67.8, Expect=8e-13]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=67.8, Expect=8e-13]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1}

Mlig455_050834 {REF} {Length: 712} {Pfam: Maintenance of mitochondrial structure and function [PF13012.8, score=20.3]} {RNA1509_23300} {RNA1310_50776.1} {RNA815_3900.1}

Cumulative graph for MligTC455_31800

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.829	1.511	0.99964	1.00000
RegionR2	1.772	1.511	0.39202	0.78673
RegionR3	3.826	1.511	0.00710	0.12124
RegionR4	0.845	1.511	0.45779	0.78585
RegionR5	2.168	1.511	0.12496	0.35601
RegionR6	1.825	1.511	0.26586	0.85386
RegionR7	-1.954	1.511	0.99955	1.00000
RegionR8	-2.653	1.511	0.99954	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.938	1.511	0.99993	1.00000
RegenerationR2	3.355	1.511	0.00549	0.11744
RegenerationR3	0.838	1.511	0.44292	0.82895
RegenerationR4	2.384	1.511	0.08305	0.45604
RegenerationR5	1.31	1.511	0.23749	0.67163
RegenerationR6	3.163	1.511	0.01215	0.13553
RegenerationBL	-0.295	1.511	0.99973	1.00000
RegenerationTP	4.363	1.511	0.12457	0.53498

Genes with expression patterns similar to MligTC455_31800

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31800	52	1.08	Mlig455_026258, Mlig455_050834	Neo: - Age: -	TRIM3	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_026258 {REF} {Length: 2117} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=43.7]; PQQ-like domain [PF13360.8, score=18.5]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=67.8, Expect=1e-12]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=67.8, Expect=1e-12]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=67.8, Expect=8e-13]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=67.8, Expect=8e-13]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1} Mlig455_050834 {REF} {Length: 712} {Pfam: Maintenance of mitochondrial structure and function [PF13012.8, score=20.3]} {RNA1509_23300} {RNA1310_50776.1} {RNA815_3900.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts