TomoSeq data search

Data search

Results for MligTC455_31811

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31811

82

1.71

Mlig455_026226

Neo: -

Age: -

TRIM3

Mlig455_026226 {REF} {Length: 912} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=28.9]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=53.5, Expect=3e-08]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=53.1, Expect=3e-08]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=53.1, Expect=3e-08]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=53.1, Expect=2e-08]} {Celegans: WBGene00003026, lin-41, [Score=51.2, Expect=7e-08]} {RNA1509_15622} {RNA1310_37306} {RNA815_3900.4}

Cumulative graph for MligTC455_31811

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.514	1.742	0.53143	1.00000
RegionR2	0.29	1.742	0.76826	1.00000
RegionR3	-1.011	1.742	0.99108	1.00000
RegionR4	0.759	1.742	0.49423	0.82079
RegionR5	0.675	1.742	0.50800	0.87086
RegionR6	0.788	1.742	0.47904	1.00000
RegionR7	0.343	1.742	0.77871	1.00000
RegionR8	1.671	1.742	0.35767	0.99189

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.024	1.742	0.99990	1.00000
RegenerationR2	0.288	1.742	0.70510	0.95808
RegenerationR3	1.253	1.742	0.23218	0.66673
RegenerationR4	0.068	1.742	0.95161	1.00000
RegenerationR5	-0.224	1.742	0.75116	0.97221
RegenerationR6	-1.322	1.742	0.17335	0.50555
RegenerationBL	0.523	1.742	0.63435	0.97429
RegenerationTP	1.228	1.742	0.28320	0.73056

Genes with expression patterns similar to MligTC455_31811

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31811	82	1.71	Mlig455_026226	Neo: - Age: -	TRIM3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026226 {REF} {Length: 912} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=28.9]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=53.5, Expect=3e-08]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=53.1, Expect=3e-08]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=53.1, Expect=3e-08]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=53.1, Expect=2e-08]} {Celegans: WBGene00003026, lin-41, [Score=51.2, Expect=7e-08]} {RNA1509_15622} {RNA1310_37306} {RNA815_3900.4}
2.	MligTC455_49947	15947	332.23	Mlig455_032811	Neo: - Age: Down-Down-Up Region-enriched R7: 1.955/0.00000		1.721	-	-	-	-	0.956	0.765	Mlig455_032811 {REF} {Length: 1080} {RNA1509_1805, RNA1509_19404} {RNA1310_46290.1, RNA1509_1805, RNA1509_19404} {RNA1509_1805, RNA1509_19404, RNA815_17046}
3.	MligTC455_45318	514	10.71	Mlig455_019179	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_019179 {REF} {Length: 2723} {TRANSSPLICED} {Pfam: Resistance to inhibitors of cholinesterase homologue 3 [PF15361.8, score=92.9]} {Dmel: FBgn0050296, RIC-3, RIC3 acetylcholine receptor chaperone, [Score=66.6, Expect=4e-12]} {Celegans: WBGene00004363, ric-3, Resistance to inhibitors of cholinesterase protein 3, [RH, Score=81.3, Expect=2e-17]} {Smed: dd_Smed_v6_5523_0_1, dd_Smed_v6_5523_0_1, [RH, Score=161, Expect=8e-48]} {RNA1509_57521} {RNA1310_35411.1} {RNA815_20913}
4.	MligTC455_19525	148	3.08	Mlig455_065980	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_065980 {REF} {Length: 561} {NoTransDecoderORF} {RNA1509_59498} {RNA1310_83003.1} {RNA815_33746.1}
5.	MligTC455_34372	996	20.76	Mlig455_050845	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_050845 {REF} {Length: 1663} {Smed: dd_Smed_v6_1890_0_1, dd_Smed_v6_1890_0_1, [RH, Score=128, Expect=1e-38]} {RNA1509_12511, RNA1509_24353, RNA1509_27386, RNA1509_52159} {RNA1310_45856.1, RNA1509_24353, RNA1509_27386, RNA1509_52159} {RNA1509_24353, RNA1509_27386, RNA1509_52159, RNA815_24927}
6.	MligTC455_24632	15131	315.24	Mlig455_021550	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.301		0.955	-	-	-	-	0.955	-	Mlig455_021550 {REF} {Length: 302} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1623, RNA1509_363} {RNA1310_113178.2, RNA1509_1623, RNA1509_363} {RNA1509_1623, RNA1509_363, RNA815_52026}
7.	MligTC455_18850	747	15.56	Mlig455_066916	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_066916 {REF} {Length: 1443} {TRANSSPLICED} {Pfam: SUZ domain [PF12752.9, score=43.3]} {RNA1509_41034} {RNA1310_22799} {RNA815_9711.1}
8.	MligTC455_22575	747	15.57	Mlig455_010177	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.718		0.954	-	-	-	-	0.954	-	Mlig455_010177 {REF} {Length: 462} {TRANSSPLICED} {RNA1509_10306, RNA1509_41224} {RNA1310_32946.2, RNA1509_10306, RNA1509_41224} {RNA1509_10306, RNA1509_41224, RNA815_39194}
9.	MligTC455_35959	50	1.04	Mlig455_026640	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_026640 {REF} {Length: 147} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_65893} {RNA815_64258}
10.	MligTC455_51897	342	7.12	Mlig455_008969	Neo: - Age: -	GCNT1	0.951	-	-	-	-	0.951	-	Mlig455_008969 {REF} {Length: 2267} {Pfam: Core-2/I-Branching enzyme [PF02485.23, score=142.1]} {Human: ENSG00000187210, GCNT1, glucosaminyl (N-acetyl) transferase 1, core 2, [RH, Score=191, Expect=1e-54]} {Mouse: ENSMUSG00000038843, Gcnt1, glucosaminyl (N-acetyl) transferase 1, core 2, [RH, Score=188, Expect=1e-53]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=79.7, Expect=3e-15]} {Celegans: WBGene00001626, gly-1, GLY-1; GLYcosylation related, [RH, Score=141, Expect=2e-36]} {Smed: dd_Smed_v6_6205_0_4, dd_Smed_v6_6205_0_4, [RH, Score=259, Expect=1e-81]} {RNA1509_14691} {RNA1310_16962} {RNA815_6581.1}
11.	MligTC455_13709	75	1.57	Mlig455_023030, Mlig455_023130	Neo: - Age: - Region-enriched R4: 6.379/0.00297		0.95	-	-	-	0.950	-	-	Mlig455_023030 {REF} {Length: 1166} {Pfam: Laminin G domain [PF02210.26, score=28.3]; Laminin G domain [PF00054.25, score=22.2]} {RNA1310_61860} {RNA815_49478} Mlig455_023130 {REF} {Length: 1173} {Pfam: Laminin G domain [PF02210.26, score=29.0]; Laminin G domain [PF00054.25, score=22.5]} {RNA1310_61860} {RNA815_49478}

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