Data search


search
Exact
Search

Results for MligTC455_31831

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31831 101 2.10 Mlig455_068369

Neo: -

Age: logFC(26M/2M)=-0.366

ARL15 Mlig455_068369 {REF} {Length: 2302} {Pfam: ADP-ribosylation factor family [PF00025.23, score=114.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=24.1]; G-protein alpha subunit [PF00503.22, score=23.2]; Ras family [PF00071.24, score=19.6]; Signal recognition particle receptor beta subunit [PF09439.12, score=19.3]} {Human: ENSG00000185305, ARL15, ADP ribosylation factor like GTPase 15, [RH, Score=118, Expect=8e-33]} {Mouse: ENSMUSG00000042348, Arl15, ADP-ribosylation factor-like 15, [RH, Score=117, Expect=1e-32]} {Dmel: FBgn0038916, dnd, dead end, [Score=92.4, Expect=3e-23]} {Celegans: WBGene00000192, arl-8, ARF-Like; Novel small G protein indispensable for equal chromosome segregation, [Score=91.3, Expect=7e-23]} {Smed: dd_Smed_v6_15424_0_1, dd_Smed_v6_15424_0_1, [RH, Score=88.6, Expect=8e-22]} {RNA1509_12839, RNA1509_3825} {RNA1310_18830, RNA1509_3825} {RNA1509_3825, RNA815_16198}

Cumulative graph for MligTC455_31831

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.473 1.883 0.46560 1.00000
RegionR2 2.566 1.883 0.27361 0.65858
RegionR3 2.528 1.883 0.15931 0.67565
RegionR4 0.22 1.883 0.84015 1.00000
RegionR5 -0.267 1.883 0.93066 1.00000
RegionR6 -0.85 1.883 0.98519 1.00000
RegionR7 0.262 1.883 0.81657 1.00000
RegionR8 0.014 1.883 0.89438 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.449 1.883 1.00000 1.00000
RegenerationR2 0.445 1.883 0.79985 0.98992
RegenerationR3 -1.409 1.883 0.48347 0.85214
RegenerationR4 0.662 1.883 0.75853 0.97232
RegenerationR5 2.219 1.883 0.28525 0.71378
RegenerationR6 1.266 1.883 0.56114 0.84633
RegenerationBL 0.453 1.883 0.84013 1.00000
RegenerationTP 1.397 1.883 0.57434 0.94685


Genes with expression patterns similar to MligTC455_31831

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31831 101 2.1 Mlig455_068369

Neo: -

Age: logFC(26M/2M)=-0.366

ARL15 5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_068369 {REF} {Length: 2302} {Pfam: ADP-ribosylation factor family [PF00025.23, score=114.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=24.1]; G-protein alpha subunit [PF00503.22, score=23.2]; Ras family [PF00071.24, score=19.6]; Signal recognition particle receptor beta subunit [PF09439.12, score=19.3]} {Human: ENSG00000185305, ARL15, ADP ribosylation factor like GTPase 15, [RH, Score=118, Expect=8e-33]} {Mouse: ENSMUSG00000042348, Arl15, ADP-ribosylation factor-like 15, [RH, Score=117, Expect=1e-32]} {Dmel: FBgn0038916, dnd, dead end, [Score=92.4, Expect=3e-23]} {Celegans: WBGene00000192, arl-8, ARF-Like; Novel small G protein indispensable for equal chromosome segregation, [Score=91.3, Expect=7e-23]} {Smed: dd_Smed_v6_15424_0_1, dd_Smed_v6_15424_0_1, [RH, Score=88.6, Expect=8e-22]} {RNA1509_12839, RNA1509_3825} {RNA1310_18830, RNA1509_3825} {RNA1509_3825, RNA815_16198}
2. MligTC455_51199 206 4.29 Mlig455_044015

Neo: -

Age: Down-Up-Down

ARX 2.39 0.957 - - 0.710 0.723 - Mlig455_044015 {REF} {Length: 1926} {Pfam: Homeodomain [PF00046.31, score=85.3]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [Score=116, Expect=8e-30]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [Score=115, Expect=1e-29]} {Dmel: FBgn0008636, hbn, homeobrain, [Score=128, Expect=5e-35]} {Celegans: WBGene00000433, ceh-8, Homeobox protein ceh-8, [RH, Score=103, Expect=6e-27]} {Smed: dd_Smed_v6_16955_0_1, dd_Smed_v6_16955_0_1, [Score=105, Expect=9e-27]} {RNA1509_46102} {RNA1310_37906, RNA1509_46102}
3. MligTC455_23370 144 3.01 Mlig455_065633

Neo: -

Age: Down-Up-Up

1.724 - - - - 0.951 0.773 Mlig455_065633 {REF} {Length: 1422} {RNA1509_56375} {RNA1310_29166.1, RNA1509_56375} {RNA1509_56375, RNA815_11123}
4. MligTC455_21693 48 1 Mlig455_024307, Mlig455_024362, Mlig455_024476

Neo: -

Age: -

AHR 1.667 - - - - 0.950 0.717

Mlig455_024307 {REF} {Length: 4440} {Pfam: PAS fold [PF08447.14, score=59.6]; PAS fold [PF00989.27, score=42.5]; PAS domain [PF14598.8, score=40.5]; PAS domain [PF13426.9, score=18.9]; C-terminal region of eIF3h [PF19445.1, score=18.6]} {Human: ENSG00000106546, AHR, aryl hydrocarbon receptor, [Score=229, Expect=8e-64]; ENSG00000283321, AC019117.2, novel protein, [Score=228, Expect=1e-63]} {Mouse: ENSMUSG00000019256, Ahr, aryl-hydrocarbon receptor, [Score=216, Expect=2e-59]} {Dmel: FBgn0003513, ss, spineless, [Score=303, Expect=7e-91]} {Celegans: WBGene00000096, ahr-1, Aryl hydrocarbon receptor protein 1, [Score=200, Expect=8e-56]} {Smed: dd_Smed_v6_17534_0_1, dd_Smed_v6_17534_0_1, [Score=369, Expect=4e-118]} {RNA1310_45588}

Mlig455_024362 {REF} {Length: 4404} {Pfam: PAS fold [PF08447.14, score=59.5]; PAS fold [PF00989.27, score=43.6]; PAS domain [PF14598.8, score=41.4]; Helix-loop-helix DNA-binding domain [PF00010.28, score=27.4]; C-terminal region of eIF3h [PF19445.1, score=20.1]} {Human: ENSG00000106546, AHR, aryl hydrocarbon receptor, [RH, Score=298, Expect=1e-88]; ENSG00000283321, AC019117.2, novel protein, [RH, Score=297, Expect=2e-88]} {Mouse: ENSMUSG00000019256, Ahr, aryl-hydrocarbon receptor, [RH, Score=286, Expect=2e-84]} {Dmel: FBgn0003513, ss, spineless, [RH, Score=398, Expect=1e-124]} {Celegans: WBGene00000096, ahr-1, Aryl hydrocarbon receptor protein 1, [RH, Score=265, Expect=6e-79]} {Smed: dd_Smed_v6_17534_0_1, dd_Smed_v6_17534_0_1, [RH, Score=503, Expect=4e-169]} {RNA1310_45588}

Mlig455_024476 {REF} {Length: 4767} {Pfam: PAS fold [PF08447.14, score=58.8]; PAS fold [PF00989.27, score=41.6]; PAS domain [PF14598.8, score=40.1]; Helix-loop-helix DNA-binding domain [PF00010.28, score=27.1]} {Human: ENSG00000106546, AHR, aryl hydrocarbon receptor, [Score=230, Expect=4e-63]; ENSG00000283321, AC019117.2, novel protein, [Score=229, Expect=4e-63]} {Mouse: ENSMUSG00000019256, Ahr, aryl-hydrocarbon receptor, [Score=217, Expect=8e-59]} {Dmel: FBgn0003513, ss, spineless, [Score=303, Expect=5e-89]} {Celegans: WBGene00000096, ahr-1, Aryl hydrocarbon receptor protein 1, [Score=199, Expect=1e-54]} {Smed: dd_Smed_v6_17534_0_1, dd_Smed_v6_17534_0_1, [Score=373, Expect=3e-117]} {RNA1310_45588}
5. MligTC455_23232 15 0.32 Mlig455_006559

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_006559 {REF} {Length: 5217} {Smed: dd_Smed_v6_2802_0_1, dd_Smed_v6_2802_0_1, [RH, Score=583, Expect=0.0]} {RNA1509_1489} {RNA1310_997.1} {RNA815_1017.1}
6. MligTC455_24604 376 7.83 Mlig455_005489

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.381

CELSR2 0.954 - - - - 0.954 - Mlig455_005489 {REF} {Length: 9041} {TRANSSPLICED} {Pfam: Cadherin domain [PF00028.19, score=468.3]; Laminin G domain [PF02210.26, score=40.3]; GPCR proteolysis site, GPS, motif [PF01825.23, score=37.2]; Laminin G domain [PF00054.25, score=34.3]; Cadherin-like [PF08266.14, score=33.8]; Cadherin-like [PF16184.7, score=31.0]; Laminin EGF domain [PF00053.26, score=25.6]; GPCR-Autoproteolysis INducing (GAIN) domain [PF16489.7, score=21.2]} {Human: ENSG00000143126, CELSR2, cadherin EGF LAG seven-pass G-type receptor 2, [RH, Score=726, Expect=0.0]; ENSG00000008300, CELSR3, cadherin EGF LAG seven-pass G-type receptor 3, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000023473, Celsr3, cadherin, EGF LAG seven-pass G-type receptor 3, [RH, Score=736, Expect=0.0]; ENSMUSG00000107269, Celsr3, cadherin, EGF LAG seven-pass G-type receptor 3, [RH, Score=736, Expect=0.0]; ENSMUSG00000068740, Celsr2, cadherin, EGF LAG seven-pass G-type receptor 2, [RH, Score=734, Expect=0.0]} {Dmel: FBgn0024836, stan, starry night, [RH, Score=743, Expect=0.0]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [RH, Score=435, Expect=2e-122]} {Smed: dd_Smed_v6_16629_0_1, dd_Smed_v6_16629_0_1, [Score=256, Expect=3e-69]} {RNA1509_8917} {RNA1310_144} {RNA815_3429}
7. MligTC455_30422 232 4.83 Mlig455_065090

Neo: -

Age: Down-Up-Up

0.953 - - - - 0.953 - Mlig455_065090 {REF} {Length: 1254} {RNA1509_42925} {RNA1310_34216} {RNA815_4396.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA