Data search
Results for MligTC455_31940
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31940 | 470 | 9.80 | Mlig455_026539 | Neo: Irradiation Age: - Region-enriched R5: 1.297/0.00079 |
MTFP1 | Mlig455_026539 {REF} {Length: 3535} {Pfam: Mitochondrial 18 KDa protein (MTP18) [PF10558.11, score=51.7]} {Human: ENSG00000242114, MTFP1, mitochondrial fission process 1, [RH, Score=140, Expect=3e-42]} {Mouse: ENSMUSG00000004748, Mtfp1, mitochondrial fission process 1, [RH, Score=148, Expect=1e-45]} {Dmel: FBgn0030883, CG7772, [RH, Score=113, Expect=5e-32]} {Celegans: WBGene00077690, mtp-18, Mitochondrial fission process protein 1, [RH, Score=148, Expect=1e-45]} {RNA1509_27482} {RNA1310_22134, RNA1509_27482} {RNA1509_27482, RNA815_10756.2} |
Cumulative graph for MligTC455_31940
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.562 | 3.739 | 0.61867 | 1.00000 | |
| RegionR2 | -0.1 | 3.739 | 0.83967 | 1.00000 | |
| RegionR3 | -0.061 | 3.739 | 0.88005 | 1.00000 | |
| RegionR4 | 0.163 | 3.739 | 0.70097 | 0.98967 | |
| RegionR5 | 1.297 | 3.739 | 0.00004 | 0.00079 | |
| RegionR6 | 0.054 | 3.739 | 0.89273 | 1.00000 | |
| RegionR7 | -0.245 | 3.739 | 0.65704 | 1.00000 | |
| RegionR8 | -0.547 | 3.739 | 0.46041 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.928 | 3.739 | 0.10514 | 0.82682 | |
| RegenerationR2 | -0.55 | 3.739 | 0.16220 | 0.59953 | |
| RegenerationR3 | -0.291 | 3.739 | 0.49220 | 0.85487 | |
| RegenerationR4 | -0.362 | 3.739 | 0.37173 | 0.79505 | |
| RegenerationR5 | -1.243 | 3.739 | 0.00043 | 0.03323 | |
| RegenerationR6 | -1.131 | 3.739 | 0.01455 | 0.14861 | |
| RegenerationBL | -1.159 | 3.739 | 0.08025 | 0.33095 | |
| RegenerationTP | 0.079 | 3.739 | 0.90098 | 1.00000 |
Genes with expression patterns similar to MligTC455_31940
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31940 | 470 | 9.8 | Mlig455_026539 | Neo: Irradiation Age: - Region-enriched R5: 1.297/0.00079 |
MTFP1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_026539 {REF} {Length: 3535} {Pfam: Mitochondrial 18 KDa protein (MTP18) [PF10558.11, score=51.7]} {Human: ENSG00000242114, MTFP1, mitochondrial fission process 1, [RH, Score=140, Expect=3e-42]} {Mouse: ENSMUSG00000004748, Mtfp1, mitochondrial fission process 1, [RH, Score=148, Expect=1e-45]} {Dmel: FBgn0030883, CG7772, [RH, Score=113, Expect=5e-32]} {Celegans: WBGene00077690, mtp-18, Mitochondrial fission process protein 1, [RH, Score=148, Expect=1e-45]} {RNA1509_27482} {RNA1310_22134, RNA1509_27482} {RNA1509_27482, RNA815_10756.2} |
| 2. | MligTC455_15872 | 488 | 10.16 | Mlig455_044709 | Neo: - Age: - Region-enriched R5: 2.100/0.00733 |
SRD5A1 | 1.722 | - | - | - | 0.768 | 0.954 | - | Mlig455_044709 {REF} {Length: 891} {Pfam: 3-oxo-5-alpha-steroid 4-dehydrogenase [PF02544.18, score=160.3]; Protein of unknown function (DUF1295) [PF06966.14, score=19.3]} {Human: ENSG00000145545, SRD5A1, steroid 5 alpha-reductase 1, [Score=167, Expect=9e-52]; ENSG00000277893, SRD5A2, steroid 5 alpha-reductase 2, [Score=160, Expect=4e-49]} {Mouse: ENSMUSG00000021594, Srd5a1, steroid 5 alpha-reductase 1, [Score=192, Expect=1e-61]} {Dmel: FBgn0032014, CG7840, [Score=55.8, Expect=2e-09]} {Celegans: WBGene00009635, F42F12.3, [Score=142, Expect=2e-42]} {Smed: dd_Smed_v6_11914_0_1, dd_Smed_v6_11914_0_1, [Score=157, Expect=2e-48]} {RNA1509_59173} {RNA1310_18838.1} {RNA815_12433.1} |
| 3. | MligTC455_52271 | 442 | 9.21 | Mlig455_044899, Mlig455_044954 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.166/0.01750 |
1.721 | - | 0.764 | - | - | - | 0.957 | Mlig455_044899 {REF} {Length: 3925} {TRANSSPLICED} {Pfam: Integrator complex subunit 5 N-terminus [PF14837.8, score=69.6]; Integrator complex subunit 5 C-terminus [PF14838.8, score=36.7]} {RNA1509_18961, RNA1509_42628} {RNA1310_6813, RNA1509_42628} {RNA1509_42628, RNA815_13770} Mlig455_044954 {REF} {Length: 3888} {TRANSSPLICED} {Pfam: Integrator complex subunit 5 N-terminus [PF14837.8, score=69.6]; Integrator complex subunit 5 C-terminus [PF14838.8, score=37.1]} {RNA1509_18961} {RNA1310_6813, RNA1509_18961} {RNA1509_18961, RNA815_13770} |
|
| 4. | MligTC455_46292 | 444 | 9.24 | Mlig455_024938 | Neo: - Age: - Region-enriched R5: 2.279/0.00036 |
SLC17A9 | 1.683 | - | 0.723 | - | - | - | 0.960 | Mlig455_024938 {REF} {Length: 2751} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=154.2]} {Human: ENSG00000101194, SLC17A9, solute carrier family 17 member 9, [RH, Score=314, Expect=2e-102]} {Mouse: ENSMUSG00000023393, Slc17a9, solute carrier family 17, member 9, [RH, Score=308, Expect=7e-100]} {Dmel: FBgn0025684, MFS18, Major Facilitator Superfamily Transporter 18, [RH, Score=333, Expect=4e-110]} {Celegans: WBGene00010758, vnut-1, Vesicular NUcleotide Transporte, [RH, Score=310, Expect=8e-101]} {Smed: dd_Smed_v6_1326_0_1, dd_Smed_v6_1326_0_1, [RH, Score=414, Expect=1e-141]} {RNA1509_48544, RNA1509_7549} {RNA1310_6054.1, RNA1509_48544, RNA1509_7549} {RNA1509_48544, RNA1509_7549, RNA815_2086.1} |
| 5. | MligTC455_41817 | 273 | 5.69 | Mlig455_050915 | Neo: - Age: Down-Down-Up Region-enriched R2: 2.421/0.00679 |
0.956 | 0.956 | - | - | - | - | - | Mlig455_050915 {REF} {Length: 1810} {TRANSSPLICED} {RNA1509_26844, RNA1509_35213} {RNA1310_16013.2, RNA1509_26844, RNA1509_35213} {RNA1509_26844, RNA1509_35213, RNA815_32730} | |
| 6. | MligTC455_52387 | 305 | 6.36 | Mlig455_045561 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_045561 {REF} {Length: 702} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=44.3]} {Dmel: FBgn0027358, Tim9b, Translocase of inner membrane 9b, [Score=40.8, Expect=1e-05]} {Celegans: WBGene00006572, tin-9.1, Mitochondrial import inner membrane translocase subunit Tim9, [Score=51.2, Expect=7e-10]} {RNA1509_21261, RNA1509_22097} {RNA1310_16763, RNA1509_21261} {RNA1509_21261, RNA815_6211.1} |
Berezikov Lab - 2020-2021 © ERIBA