Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_32015 | 748 | 15.58 | Mlig455_009896, Mlig455_057058 | Neo: - Age: - |
DNAJC7 | Mlig455_009896 {REF} {Length: 6427} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=45.9]; Tetratricopeptide repeat [PF00515.30, score=35.3]; TPR repeat [PF13414.8, score=28.8]; Tetratricopeptide repeat [PF13371.8, score=28.3]; Tetratricopeptide repeat [PF13428.8, score=26.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=24.7]; UBA/TS-N domain [PF00627.33, score=23.8]} {Human: ENSG00000168259, DNAJC7, DnaJ heat shock protein family (Hsp40) member C7, [Score=67.0, Expect=4e-11]; ENSG00000011485, PPP5C, protein phosphatase 5 catalytic subunit, [Score=63.9, Expect=3e-10]} {Mouse: ENSMUSG00000014195, Dnajc7, DnaJ heat shock protein family (Hsp40) member C7, [Score=67.4, Expect=6e-13]; ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [Score=65.5, Expect=9e-11]} {Dmel: FBgn0032586, Tpr2, Tetratricopeptide repeat protein 2, [Score=54.3, Expect=2e-07]} {Celegans: WBGene00004194, prx-5, PeRoXisome assembly factor, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_7162} {RNA1310_9351.1} {RNA815_11968} Mlig455_057058 {REF} {Length: 6349} {Pfam: Tetratricopeptide repeat [PF00515.30, score=36.2]; Tetratricopeptide repeat [PF07719.19, score=35.8]; TPR repeat [PF13414.8, score=29.2]; Tetratricopeptide repeat [PF13371.8, score=28.8]; UBA/TS-N domain [PF00627.33, score=24.1]; Tetratricopeptide repeat [PF13428.8, score=23.4]; Tetratricopeptide repeat [PF13181.8, score=20.0]} {Human: ENSG00000168259, DNAJC7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.6, Expect=3e-11]} {Mouse: ENSMUSG00000014195, Dnajc7, DnaJ heat shock protein family (Hsp40) member C7, [Score=67.0, Expect=7e-13]; ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [Score=63.9, Expect=2e-10]} {Dmel: FBgn0032586, Tpr2, Tetratricopeptide repeat protein 2, [Score=54.3, Expect=2e-07]} {Celegans: WBGene00004194, prx-5, PeRoXisome assembly factor, [Score=48.9, Expect=6e-06]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [Score=53.1, Expect=1e-07]} {RNA1509_39120, RNA1509_7162} {RNA1310_9351.1, RNA1509_39120} {RNA1509_39120, RNA815_11968} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.511 | 4.291 | 0.33129 | 0.97727 | |
RegionR2 | -0.578 | 4.291 | 0.30551 | 0.69608 | |
RegionR3 | -0.188 | 4.291 | 0.69240 | 1.00000 | |
RegionR4 | 1.143 | 4.291 | 0.03324 | 0.14606 | |
RegionR5 | 0.822 | 4.291 | 0.03990 | 0.15916 | |
RegionR6 | 0.08 | 4.291 | 0.85703 | 1.00000 | |
RegionR7 | 0.082 | 4.291 | 0.87980 | 1.00000 | |
RegionR8 | 0.151 | 4.291 | 0.80984 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 0.538 | 4.291 | 0.80991 | 1.00000 | |
RegenerationR2 | 0.25 | 4.291 | 0.55810 | 0.89776 | |
RegenerationR3 | 0.132 | 4.291 | 0.78279 | 0.97637 | |
RegenerationR4 | -0.285 | 4.291 | 0.56052 | 0.89702 | |
RegenerationR5 | 0.381 | 4.291 | 0.38057 | 0.78699 | |
RegenerationR6 | 0.639 | 4.291 | 0.17588 | 0.50905 | |
RegenerationBL | 0.133 | 4.291 | 0.79702 | 1.00000 | |
RegenerationTP | -0.411 | 4.291 | 0.48511 | 0.89202 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_32015 | 748 | 15.58 | Mlig455_009896, Mlig455_057058 | Neo: - Age: - |
DNAJC7 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009896 {REF} {Length: 6427} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=45.9]; Tetratricopeptide repeat [PF00515.30, score=35.3]; TPR repeat [PF13414.8, score=28.8]; Tetratricopeptide repeat [PF13371.8, score=28.3]; Tetratricopeptide repeat [PF13428.8, score=26.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=24.7]; UBA/TS-N domain [PF00627.33, score=23.8]} {Human: ENSG00000168259, DNAJC7, DnaJ heat shock protein family (Hsp40) member C7, [Score=67.0, Expect=4e-11]; ENSG00000011485, PPP5C, protein phosphatase 5 catalytic subunit, [Score=63.9, Expect=3e-10]} {Mouse: ENSMUSG00000014195, Dnajc7, DnaJ heat shock protein family (Hsp40) member C7, [Score=67.4, Expect=6e-13]; ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [Score=65.5, Expect=9e-11]} {Dmel: FBgn0032586, Tpr2, Tetratricopeptide repeat protein 2, [Score=54.3, Expect=2e-07]} {Celegans: WBGene00004194, prx-5, PeRoXisome assembly factor, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_7162} {RNA1310_9351.1} {RNA815_11968} Mlig455_057058 {REF} {Length: 6349} {Pfam: Tetratricopeptide repeat [PF00515.30, score=36.2]; Tetratricopeptide repeat [PF07719.19, score=35.8]; TPR repeat [PF13414.8, score=29.2]; Tetratricopeptide repeat [PF13371.8, score=28.8]; UBA/TS-N domain [PF00627.33, score=24.1]; Tetratricopeptide repeat [PF13428.8, score=23.4]; Tetratricopeptide repeat [PF13181.8, score=20.0]} {Human: ENSG00000168259, DNAJC7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.6, Expect=3e-11]} {Mouse: ENSMUSG00000014195, Dnajc7, DnaJ heat shock protein family (Hsp40) member C7, [Score=67.0, Expect=7e-13]; ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [Score=63.9, Expect=2e-10]} {Dmel: FBgn0032586, Tpr2, Tetratricopeptide repeat protein 2, [Score=54.3, Expect=2e-07]} {Celegans: WBGene00004194, prx-5, PeRoXisome assembly factor, [Score=48.9, Expect=6e-06]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [Score=53.1, Expect=1e-07]} {RNA1509_39120, RNA1509_7162} {RNA1310_9351.1, RNA1509_39120} {RNA1509_39120, RNA815_11968} |
2. | MligTC455_31155 | 831 | 17.31 | Mlig455_041818 | Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R4: 2.479/0.00098 |
RANBP2 | 1.847 | - | - | - | 0.963 | 0.884 | - | Mlig455_041818 {REF} {Length: 8642} {TRANSSPLICED} {Pfam: RanBP1 domain [PF00638.20, score=351.3]; Tetratricopeptide repeat [PF13432.8, score=21.3]} {Human: ENSG00000153201, RANBP2, RAN binding protein 2, [Score=165, Expect=1e-39]} {Mouse: ENSMUSG00000003226, Ranbp2, RAN binding protein 2, [Score=243, Expect=1e-63]} {Dmel: FBgn0039302, Nup358, Nucleoporin 358kD, [RH, Score=261, Expect=2e-69]} {Celegans: WBGene00003795, npp-9, Nuclear Pore complex Protein, [RH, Score=251, Expect=8e-69]} {Smed: dd_Smed_v6_2979_0_1, dd_Smed_v6_2979_0_1, [RH, Score=143, Expect=7e-37]} {RNA1509_5818} {RNA1310_199.1} {RNA815_7098} |
3. | MligTC455_35647 | 11544 | 240.5 | Mlig455_044426 | Neo: Int S/G2/M Age: - |
CALR | 0.966 | - | - | - | - | 0.966 | - | Mlig455_044426 {REF} {Length: 2103} {Pfam: Calreticulin family [PF00262.20, score=127.0]} {Human: ENSG00000179218, CALR, calreticulin, [Score=296, Expect=2e-98]} {Mouse: ENSMUSG00000003814, Calr, calreticulin, [Score=295, Expect=4e-98]} {Dmel: FBgn0005585, Calr, Calreticulin, [Score=293, Expect=1e-97]} {Celegans: WBGene00000802, crt-1, Calreticulin, [Score=259, Expect=7e-85]} {Smed: dd_Smed_v6_220_0_4, dd_Smed_v6_220_0_4, [Score=309, Expect=3e-104]} {RNA1509_145, RNA1509_1526, RNA1509_2312, RNA1509_30582} {RNA1310_7869, RNA1509_1526, RNA1509_2312, RNA1509_30582} {RNA1509_1526, RNA1509_2312, RNA1509_30582, RNA815_3522.1} |
4. | MligTC455_36031 | 11558 | 240.79 | Mlig455_069053 | Neo: - Age: Down-Up-Up |
RPS8 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_069053 {REF} {Length: 884} {TRANSSPLICED} {Pfam: Ribosomal protein S8e [PF01201.24, score=173.7]} {Human: ENSG00000142937, RPS8, ribosomal protein S8, [RH, Score=258, Expect=4e-87]} {Mouse: ENSMUSG00000047675, Rps8, ribosomal protein S8, [RH, Score=258, Expect=3e-87]} {Dmel: FBgn0039713, RpS8, Ribosomal protein S8, [RH, Score=271, Expect=1e-92]} {Celegans: WBGene00004477, rps-8, 40S ribosomal protein S8, [RH, Score=254, Expect=3e-86]} {Smed: dd_Smed_v6_156_0_1, dd_Smed_v6_156_0_1, [RH, Score=239, Expect=3e-80]} {RNA1509_2196} {RNA1310_38261} {RNA815_19193} |
5. | MligTC455_53613 | 665 | 13.86 | Mlig455_016702 | Neo: Irradiation Age: - |
RCOR3 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_016702 {REF} {Length: 2704} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=57.4]; Myb-like DNA-binding domain [PF13921.8, score=28.5]; Myb DNA-binding like [PF15963.7, score=27.7]} {Human: ENSG00000117625, RCOR3, REST corepressor 3, [RH, Score=256, Expect=2e-78]; ENSG00000089902, RCOR1, REST corepressor 1, [RH, Score=250, Expect=6e-77]} {Mouse: ENSMUSG00000037395, Rcor3, REST corepressor 3, [RH, Score=256, Expect=4e-80]; ENSMUSG00000111452, Rcor3, REST corepressor 3, [RH, Score=256, Expect=4e-80]; ENSMUSG00000037896, Rcor1, REST corepressor 1, [RH, Score=249, Expect=4e-78]} {Dmel: FBgn0261573, CoRest, [RH, Score=199, Expect=3e-57]} {RNA1509_18788} {RNA1310_4503.1} {RNA815_5770} |
6. | MligTC455_34506 | 142 | 2.96 | Mlig455_053469 | Neo: Int S/G2/M Age: Down-Up-Down |
SLBP | 0.956 | - | - | - | 0.956 | - | - | Mlig455_053469 {REF} {Length: 3296} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.7]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=86.7, Expect=4e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=86.3, Expect=1e-18]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=1e-15]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=67.8, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=100, Expect=4e-24]} {RNA1509_9558} {RNA1310_22526.2} {RNA815_16079} |
7. | MligTC455_54135 | 1504 | 31.33 | Mlig455_050930, Mlig455_050945 | Neo: - Age: logFC(26M/2M)=-0.345 |
RBCK1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_050930 {REF} {Length: 1936} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=25.8]} {Human: ENSG00000125826, RBCK1, RANBP2-type and C3HC4-type zinc finger containing 1, [Score=62.8, Expect=1e-10]} {Mouse: ENSMUSG00000022552, Sharpin, SHANK-associated RH domain interacting protein, [RH, Score=57.4, Expect=1e-08]} {RNA1509_31956, RNA1509_44318} {RNA1310_15794.1, RNA1509_31956} {RNA1509_31956, RNA815_29114} Mlig455_050945 {REF} {Length: 4689} {Pfam: Zn-finger in Ran binding protein and others [PF00641.20, score=25.7]} {Human: ENSG00000125826, RBCK1, RANBP2-type and C3HC4-type zinc finger containing 1, [Score=64.3, Expect=6e-11]} {Mouse: ENSMUSG00000027466, Rbck1, RanBP-type and C3HC4-type zinc finger containing 1, [Score=58.5, Expect=8e-09]} {RNA1509_44318, RNA1509_46781, RNA1509_47737} {RNA1310_15794.1, RNA1509_44318, RNA1509_46781, RNA1509_47737} {RNA1509_44318, RNA1509_46781, RNA1509_47737, RNA815_29114} |