TomoSeq data search

Data search

Results for MligTC455_32052

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_32052	702	14.64	Mlig455_067406, Mlig455_069543	Neo: - Age: -	ARL5B	Mlig455_067406 {REF} {Length: 3164} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=207.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=48.6]; Ras family [PF00071.24, score=43.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=41.7]; G-protein alpha subunit [PF00503.22, score=39.7]; 50S ribosome-binding GTPase [PF01926.25, score=31.2]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.0]} {Human: ENSG00000165997, ARL5B, ADP ribosylation factor like GTPase 5B, [Score=219, Expect=4e-73]; ENSG00000162980, ARL5A, ADP ribosylation factor like GTPase 5A, [Score=218, Expect=6e-73]} {Mouse: ENSMUSG00000038352, Arl5c, ADP-ribosylation factor-like 5C, [Score=221, Expect=3e-74]; ENSMUSG00000017418, Arl5b, ADP-ribosylation factor-like 5B, [Score=219, Expect=2e-73]; ENSMUSG00000036093, Arl5a, ADP-ribosylation factor-like 5A, [Score=216, Expect=2e-72]} {Dmel: FBgn0035866, Arl5, ADP-ribosylation factor-like 5, [Score=229, Expect=1e-77]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=191, Expect=1e-62]} {Smed: dd_Smed_v6_4015_0_1, dd_Smed_v6_4015_0_1, [Score=221, Expect=1e-74]} {RNA1509_47865, RNA1509_52117} {RNA1310_36915.1, RNA1509_47865, RNA1509_52117} {RNA1509_47865, RNA1509_52117, RNA815_24231} Mlig455_069543 {REF} {Length: 2144} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=207.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=48.0]; Ras family [PF00071.24, score=43.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=39.4]; G-protein alpha subunit [PF00503.22, score=39.2]; 50S ribosome-binding GTPase [PF01926.25, score=30.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.9]} {Human: ENSG00000165997, ARL5B, ADP ribosylation factor like GTPase 5B, [Score=221, Expect=7e-74]; ENSG00000162980, ARL5A, ADP ribosylation factor like GTPase 5A, [Score=221, Expect=4e-74]} {Mouse: ENSMUSG00000038352, Arl5c, ADP-ribosylation factor-like 5C, [Score=226, Expect=5e-76]; ENSMUSG00000017418, Arl5b, ADP-ribosylation factor-like 5B, [Score=221, Expect=5e-74]; ENSMUSG00000036093, Arl5a, ADP-ribosylation factor-like 5A, [Score=219, Expect=1e-73]} {Dmel: FBgn0035866, Arl5, ADP-ribosylation factor-like 5, [Score=231, Expect=3e-78]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=190, Expect=4e-62]} {Smed: dd_Smed_v6_4015_0_1, dd_Smed_v6_4015_0_1, [Score=221, Expect=8e-75]} {RNA1509_52117} {RNA1310_24043.2} {RNA815_24231}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_32052

702

14.64

Mlig455_067406, Mlig455_069543

Neo: -

Age: -

ARL5B

Mlig455_067406 {REF} {Length: 3164} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=207.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=48.6]; Ras family [PF00071.24, score=43.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=41.7]; G-protein alpha subunit [PF00503.22, score=39.7]; 50S ribosome-binding GTPase [PF01926.25, score=31.2]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.0]} {Human: ENSG00000165997, ARL5B, ADP ribosylation factor like GTPase 5B, [Score=219, Expect=4e-73]; ENSG00000162980, ARL5A, ADP ribosylation factor like GTPase 5A, [Score=218, Expect=6e-73]} {Mouse: ENSMUSG00000038352, Arl5c, ADP-ribosylation factor-like 5C, [Score=221, Expect=3e-74]; ENSMUSG00000017418, Arl5b, ADP-ribosylation factor-like 5B, [Score=219, Expect=2e-73]; ENSMUSG00000036093, Arl5a, ADP-ribosylation factor-like 5A, [Score=216, Expect=2e-72]} {Dmel: FBgn0035866, Arl5, ADP-ribosylation factor-like 5, [Score=229, Expect=1e-77]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=191, Expect=1e-62]} {Smed: dd_Smed_v6_4015_0_1, dd_Smed_v6_4015_0_1, [Score=221, Expect=1e-74]} {RNA1509_47865, RNA1509_52117} {RNA1310_36915.1, RNA1509_47865, RNA1509_52117} {RNA1509_47865, RNA1509_52117, RNA815_24231}

Mlig455_069543 {REF} {Length: 2144} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=207.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=48.0]; Ras family [PF00071.24, score=43.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=39.4]; G-protein alpha subunit [PF00503.22, score=39.2]; 50S ribosome-binding GTPase [PF01926.25, score=30.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.9]} {Human: ENSG00000165997, ARL5B, ADP ribosylation factor like GTPase 5B, [Score=221, Expect=7e-74]; ENSG00000162980, ARL5A, ADP ribosylation factor like GTPase 5A, [Score=221, Expect=4e-74]} {Mouse: ENSMUSG00000038352, Arl5c, ADP-ribosylation factor-like 5C, [Score=226, Expect=5e-76]; ENSMUSG00000017418, Arl5b, ADP-ribosylation factor-like 5B, [Score=221, Expect=5e-74]; ENSMUSG00000036093, Arl5a, ADP-ribosylation factor-like 5A, [Score=219, Expect=1e-73]} {Dmel: FBgn0035866, Arl5, ADP-ribosylation factor-like 5, [Score=231, Expect=3e-78]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=190, Expect=4e-62]} {Smed: dd_Smed_v6_4015_0_1, dd_Smed_v6_4015_0_1, [Score=221, Expect=8e-75]} {RNA1509_52117} {RNA1310_24043.2} {RNA815_24231}

Cumulative graph for MligTC455_32052

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.532	4.141	0.57045	1.00000
RegionR2	0.398	4.141	0.40364	0.79740
RegionR3	0.035	4.141	0.92862	1.00000
RegionR4	0.816	4.141	0.06789	0.23726
RegionR5	0.048	4.141	0.89205	1.00000
RegionR6	-0.618	4.141	0.15131	0.69369
RegionR7	-0.102	4.141	0.82919	1.00000
RegionR8	-1.108	4.141	0.08488	0.55194

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.292	4.141	0.05307	0.70520
RegenerationR2	0.175	4.141	0.67924	0.94859
RegenerationR3	0.728	4.141	0.13027	0.55338
RegenerationR4	-0.278	4.141	0.56423	0.89886
RegenerationR5	-0.139	4.141	0.75310	0.97254
RegenerationR6	0.037	4.141	0.94980	1.00000
RegenerationBL	0.177	4.141	0.77592	1.00000
RegenerationTP	0.753	4.141	0.19974	0.64046

Genes with expression patterns similar to MligTC455_32052

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_32052	702	14.64	Mlig455_067406, Mlig455_069543	Neo: - Age: -	ARL5B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_067406 {REF} {Length: 3164} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=207.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=48.6]; Ras family [PF00071.24, score=43.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=41.7]; G-protein alpha subunit [PF00503.22, score=39.7]; 50S ribosome-binding GTPase [PF01926.25, score=31.2]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.0]} {Human: ENSG00000165997, ARL5B, ADP ribosylation factor like GTPase 5B, [Score=219, Expect=4e-73]; ENSG00000162980, ARL5A, ADP ribosylation factor like GTPase 5A, [Score=218, Expect=6e-73]} {Mouse: ENSMUSG00000038352, Arl5c, ADP-ribosylation factor-like 5C, [Score=221, Expect=3e-74]; ENSMUSG00000017418, Arl5b, ADP-ribosylation factor-like 5B, [Score=219, Expect=2e-73]; ENSMUSG00000036093, Arl5a, ADP-ribosylation factor-like 5A, [Score=216, Expect=2e-72]} {Dmel: FBgn0035866, Arl5, ADP-ribosylation factor-like 5, [Score=229, Expect=1e-77]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=191, Expect=1e-62]} {Smed: dd_Smed_v6_4015_0_1, dd_Smed_v6_4015_0_1, [Score=221, Expect=1e-74]} {RNA1509_47865, RNA1509_52117} {RNA1310_36915.1, RNA1509_47865, RNA1509_52117} {RNA1509_47865, RNA1509_52117, RNA815_24231} Mlig455_069543 {REF} {Length: 2144} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=207.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=48.0]; Ras family [PF00071.24, score=43.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=39.4]; G-protein alpha subunit [PF00503.22, score=39.2]; 50S ribosome-binding GTPase [PF01926.25, score=30.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.9]} {Human: ENSG00000165997, ARL5B, ADP ribosylation factor like GTPase 5B, [Score=221, Expect=7e-74]; ENSG00000162980, ARL5A, ADP ribosylation factor like GTPase 5A, [Score=221, Expect=4e-74]} {Mouse: ENSMUSG00000038352, Arl5c, ADP-ribosylation factor-like 5C, [Score=226, Expect=5e-76]; ENSMUSG00000017418, Arl5b, ADP-ribosylation factor-like 5B, [Score=221, Expect=5e-74]; ENSMUSG00000036093, Arl5a, ADP-ribosylation factor-like 5A, [Score=219, Expect=1e-73]} {Dmel: FBgn0035866, Arl5, ADP-ribosylation factor-like 5, [Score=231, Expect=3e-78]} {Celegans: WBGene00000183, arf-3, ADP-Ribosylation Factor related; ADP-ribosylation factor related (20.5 kD) (Arf-3), [Score=190, Expect=4e-62]} {Smed: dd_Smed_v6_4015_0_1, dd_Smed_v6_4015_0_1, [Score=221, Expect=8e-75]} {RNA1509_52117} {RNA1310_24043.2} {RNA815_24231}
2.	MligTC455_11852	209	4.36	Mlig455_043128	Neo: Irradiation Age: Up-Down-Down	ANAPC1	0.951	-	0.951	-	-	-	-	Mlig455_043128 {REF} {Length: 8060} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 1 [PF12859.9, score=21.8]} {Human: ENSG00000153107, ANAPC1, anaphase promoting complex subunit 1, [RH, Score=205, Expect=4e-52]} {Mouse: ENSMUSG00000014355, Anapc1, anaphase promoting complex subunit 1, [RH, Score=206, Expect=1e-52]} {Dmel: FBgn0004391, shtd, shattered, [RH, Score=214, Expect=3e-55]} {Celegans: WBGene00003133, mat-2, Anaphase-promoting complex subunit 1, [RH, Score=179, Expect=9e-45]} {Smed: dd_Smed_v6_8329_0_1, dd_Smed_v6_8329_0_1, [RH, Score=162, Expect=1e-40]} {RNA1509_56813, RNA1509_9751} {RNA1310_441.1, RNA1509_56813} {RNA1509_56813, RNA815_441.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_32052

702

14.64

Mlig455_067406, Mlig455_069543

Neo: -

Age: -

ARL5B

1.000

MligTC455_11852

209

4.36

Mlig455_043128

Neo: Irradiation

Age: Up-Down-Down

ANAPC1

0.951

Mlig455_043128 {REF} {Length: 8060} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 1 [PF12859.9, score=21.8]} {Human: ENSG00000153107, ANAPC1, anaphase promoting complex subunit 1, [RH, Score=205, Expect=4e-52]} {Mouse: ENSMUSG00000014355, Anapc1, anaphase promoting complex subunit 1, [RH, Score=206, Expect=1e-52]} {Dmel: FBgn0004391, shtd, shattered, [RH, Score=214, Expect=3e-55]} {Celegans: WBGene00003133, mat-2, Anaphase-promoting complex subunit 1, [RH, Score=179, Expect=9e-45]} {Smed: dd_Smed_v6_8329_0_1, dd_Smed_v6_8329_0_1, [RH, Score=162, Expect=1e-40]} {RNA1509_56813, RNA1509_9751} {RNA1310_441.1, RNA1509_56813} {RNA1509_56813, RNA815_441.1}